Pgap3 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pgap3
Entrez Gene ID	688174
Full Name	post-GPI attachment to proteins 3
Synonyms	Perld1
General protein information	Preferred Names post-GPI attachment to proteins 3 Names post-GPI attachment to proteins factor 3 per1-like domain containing 1
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 10 Map Location: 10q31

mRNA and Protein(s)

mRNA	Protein	Name
NM_001143895.1	NP_001137367.1	post-GPI attachment to proteins factor 3 precursor
XM_008768113.2	XP_008766335.1	post-GPI attachment to proteins factor 3 isoform X1

Pathways from BioSystems

Homologies

Kluyveromyces lactis	KLLA0C02101g	XP_452290.1
Canis lupus familiaris (dog)	PGAP3	XP_548142.4
Arabidopsis thaliana (thale cress)	AT1G16560	NP_973843.1
Magnaporthe oryzae (rice blast fungus)	MGG_04527	XP_003713578.1
Neurospora crassa	NCU08609	XP_964817.2
Oryza sativa (rice)	Os05g0220100	NP_001054945.1
Homo sapiens (human)	PGAP3	NP_219487.3
Drosophila melanogaster (fruit fly)	CG3271	NP_610223.1
Schizosaccharomyces pombe (fission yeast)	SPAC823.07	NP_593834.1
Eremothecium gossypii	AGOS_AFR678C	NP_986226.2
Pan troglodytes (chimpanzee)	PGAP3	XP_511460.1
Mus musculus (house mouse)	Pgap3	NP_001028709.2
Rattus norvegicus (Norway rat)	Perld1	NP_001137367.1
Saccharomyces cerevisiae (baker's yeast)	PER1	NP_009973.1
Bos taurus (cattle)	PGAP3	NP_001098833.1
Gallus gallus (chicken)	PGAP3	XP_003642860.1
Xenopus tropicalis (tropical clawed frog)	pgap3	NP_001072247.1
Macaca mulatta (Rhesus monkey)	PGAP3	XP_001090781.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005392	XP_315401.4
Danio rerio (zebrafish)	zgc:171485	NP_001108063.1

Gene Ontology
Bibliography

Related articles in PubMed

PER1 is required for GPI-phospholipase A2 activity and involved in lipid remodeling of GPI-anchored proteins.
Fujita M, Umemura M, Yoko-o T, Jigami Y
Molecular biology of the cell17(12)5253-64(2006 Dec)

Gene and alternative splicing annotation with AIR.
Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G
Genome research15(1)54-66(2005 Jan)

Identification of the CAB2/hCOS16 gene required for the repair of DNA double-strand breaks on a core amplified region of the 17q12 locus in breast and gastric cancers.
Nezu M, Nishigaki M, Ishizuka T, Kuwahara Y, Tanabe C, Aoyagi K, Sakamoto H, Saito Y, Yoshida T, Sasaki H, Terada M
Japanese journal of cancer research : Gann93(11)1183-6(2002 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Pgap3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pgap3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa13746	NM_001143895.1 Latest version!	Rattus norvegicus post-GPI attachment to proteins phospholipase 3 (Pgap3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
ORa50261	XM_008768113.2 Latest version!	Rattus norvegicus post-GPI attachment to proteins 3 (Pgap3), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pgap3 ( NM_001143895.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001137367.1 Rattus norvegicus post-GPI attachment to proteins phospholipase 3 (Pgap3), mRNA.

Price & Availability↑

CloneID	ORa13746
Clone ID Related Accession (Same CDS sequence)	NM_001143895.1
Accession Version	NM_001143895.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 963bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1568563200000
Organism	Rattus norvegicus(Norway rat)
Product	post-GPI attachment to proteins factor 3 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473948.1. On Jan 22, 2009 this sequence version replaced XM_001081396.1. ##Evidence-Data-START## Transcript exon combination :: BC161914.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGGCCAGGC GGACGGCGCC GCTGCTGCTG CTAACCTTGG CAGTGGGACT CGCAGGGAGT 
TCCCAGGGCG ACCGCGAGCC GGTGTACCGC GACTGCGTGC TGCGGTGCGA GGAACGGAAC 
TGTTCGGGGG ACGCACTGAA GCACTTCCGC TCCCGCCAGC CAATCTACAT GAGCCTAGCT 
GGCTGGACTT GTCGGGACGA CTGCAAGTAT GAGTGTATGT GGCTCACTGT TGGTCTCTAT 
CTTCAGGAGG GCTACAGAGT GCCTCAGTTC CATGGCAAGT GGCCCTTCTC CCGGTTCCTG 
TTCATCCAAG AGCCAGCTTC TGCCCTGGCC TCGCTCCTCA ATGGCCTGGC CAGCCTGGTG 
ATGCTCTGTC GCTATCGCGC CTCCGTGCCA GCCTCCTCCC CCATGTACCA CACCTGCATG 
GCCTTCGCTT GGGTGTCTCT CAATGCTTGG TTCTGGTCCA CAGTCTTCCA TACCAGGGAC 
ACTGACCTCA CAGAGAAGAT GGACTACTTC TGTGCTTCAG CCGTCATCCT GCATTCTGTT 
TACCTGTGCT GTGTCAGGAC CGTGGGACTG CAGCACCCGA CCGTGGCCAG TGCCTTCGGT 
GCCCTGCTGC TGCTGCTGCT GACAGGACAC ATCTCCTACC TGAGCCTTGT CCATTTCGAC 
TACGGCTACA ATATGATGGC CAATGTGGCT ATAGGCCTGG TGAATCTGGC GTGGTGGCTG 
GTCTGGTGCC TACGGAACCA CCGGCGCCTA CCTCACACCC GCAGGTGTAT GGTGGTGGTG 
GTGCTGCTGC AGGGGCTGTC CCTGCTGGAG CTGCTCGACT TCCCTCCCCT CTTCTGGGTG 
CTGGATGCTC ATGCCATCTG GCACATCAGC ACCATCCCCG TCCACACCCT CTTCTTCAGA 
TTTCTGGAAG ACGACAGCCT ATACCTACTG AAGGAATCTG AAGCTATGTT CAAGCTGGAC 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001137367.1
CDS	42..1004
Translation	MARRTAPLLLLTLAVGLAGSSQGDREPVYRDCVLRCEERNCSGDALKHFRSRQPIYMSLAGWTCRDDCKYECMWLTVGLYLQEGYRVPQFHGKWPFSRFLFIQEPASALASLLNGLASLVMLCRYRASVPASSPMYHTCMAFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSVYLCCVRTVGLQHPTVASAFGALLLLLLTGHISYLSLVHFDYGYNMMANVAIGLVNLAWWLVWCLRNHRRLPHTRRCMVVVVLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDSLYLLKESEAMFKLD

Target ORF information:

RefSeq Version	NM_001143895.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus post-GPI attachment to proteins phospholipase 3 (Pgap3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001143895.1

ORF Insert Sequence:

ATGGCCAGGC GGACGGCGCC GCTGCTGCTG CTAACCTTGG CAGTGGGACT CGCAGGGAGT 
TCCCAGGGCG ACCGCGAGCC GGTGTACCGC GACTGCGTGC TGCGGTGCGA GGAACGGAAC 
TGTTCGGGGG ACGCACTGAA GCACTTCCGC TCCCGCCAGC CAATCTACAT GAGCCTAGCT 
GGCTGGACTT GTCGGGACGA CTGCAAGTAT GAGTGTATGT GGCTCACTGT TGGTCTCTAT 
CTTCAGGAGG GCTACAGAGT GCCTCAGTTC CATGGCAAGT GGCCCTTCTC CCGGTTCCTG 
TTCATCCAAG AGCCAGCTTC TGCCCTGGCC TCGCTCCTCA ATGGCCTGGC CAGCCTGGTG 
ATGCTCTGTC GCTATCGCGC CTCCGTGCCA GCCTCCTCCC CCATGTACCA CACCTGCATG 
GCCTTCGCTT GGGTGTCTCT CAATGCTTGG TTCTGGTCCA CAGTCTTCCA TACCAGGGAC 
ACTGACCTCA CAGAGAAGAT GGACTACTTC TGTGCTTCAG CCGTCATCCT GCATTCTGTT 
TACCTGTGCT GTGTCAGGAC CGTGGGACTG CAGCACCCGA CCGTGGCCAG TGCCTTCGGT 
GCCCTGCTGC TGCTGCTGCT GACAGGACAC ATCTCCTACC TGAGCCTTGT CCATTTCGAC 
TACGGCTACA ATATGATGGC CAATGTGGCT ATAGGCCTGG TGAATCTGGC GTGGTGGCTG 
GTCTGGTGCC TACGGAACCA CCGGCGCCTA CCTCACACCC GCAGGTGTAT GGTGGTGGTG 
GTGCTGCTGC AGGGGCTGTC CCTGCTGGAG CTGCTCGACT TCCCTCCCCT CTTCTGGGTG 
CTGGATGCTC ATGCCATCTG GCACATCAGC ACCATCCCCG TCCACACCCT CTTCTTCAGA 
TTTCTGGAAG ACGACAGCCT ATACCTACTG AAGGAATCTG AAGCTATGTT CAAGCTGGAC 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Pgap3 ( XM_008768113.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008766335.1 Rattus norvegicus post-GPI attachment to proteins 3 (Pgap3), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa50261
Clone ID Related Accession (Same CDS sequence)	XM_008768113.2
Accession Version	XM_008768113.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 810bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	post-GPI attachment to proteins factor 3 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008768113.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCAGGC GGACGGCGCC GCTGCTGCTG CTAACCTTGG CAGTGGGACT CGCAGGGAGT 
TCCCAGGGCG ACCGCGAGCC GGTGTACCGC GACTGCGTGC TGCGGTGCGA GGAACGGAAC 
TGTTCGGGGG ACGCACTGAA GCACTTCCGC TCCCGCCAGC CAATCTACAT GAGCCTAGCT 
GGCTGGACTT GTCGGGACGA CTGCAAGTAT GAGTGTATGT GGCTCACTGT TGGTCTCTAT 
CTTCAGGAGG GCTACAGAGT GCCTCAGTTC CATGGCAAGG TGTCTCTCAA TGCTTGGTTC 
TGGTCCACAG TCTTCCATAC CAGGGACACT GACCTCACAG AGAAGATGGA CTACTTCTGT 
GCTTCAGCCG TCATCCTGCA TTCTGTTTAC CTGTGCTGTG TCAGGACCGT GGGACTGCAG 
CACCCGACCG TGGCCAGTGC CTTCGGTGCC CTGCTGCTGC TGCTGCTGAC AGGACACATC 
TCCTACCTGA GCCTTGTCCA TTTCGACTAC GGCTACAATA TGATGGCCAA TGTGGCTATA 
GGCCTGGTGA ATCTGGCGTG GTGGCTGGTC TGGTGCCTAC GGAACCACCG GCGCCTACCT 
CACACCCGCA GGTGTATGGT GGTGGTGGTG CTGCTGCAGG GGCTGTCCCT GCTGGAGCTG 
CTCGACTTCC CTCCCCTCTT CTGGGTGCTG GATGCTCATG CCATCTGGCA CATCAGCACC 
ATCCCCGTCC ACACCCTCTT CTTCAGATTT CTGGAAGACG ACAGCCTATA CCTACTGAAG 
GAATCTGAAG CTATGTTCAA GCTGGACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008766335.1
CDS	1274..2083
Translation	MARRTAPLLLLTLAVGLAGSSQGDREPVYRDCVLRCEERNCSGDALKHFRSRQPIYMSLAGWTCRDDCKYECMWLTVGLYLQEGYRVPQFHGKVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSVYLCCVRTVGLQHPTVASAFGALLLLLLTGHISYLSLVHFDYGYNMMANVAIGLVNLAWWLVWCLRNHRRLPHTRRCMVVVVLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDSLYLLKESEAMFKLD

Target ORF information:

RefSeq Version	XM_008768113.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus post-GPI attachment to proteins 3 (Pgap3), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008768113.2

ORF Insert Sequence:

ATGGCCAGGC GGACGGCGCC GCTGCTGCTG CTAACCTTGG CAGTGGGACT CGCAGGGAGT 
TCCCAGGGCG ACCGCGAGCC GGTGTACCGC GACTGCGTGC TGCGGTGCGA GGAACGGAAC 
TGTTCGGGGG ACGCACTGAA GCACTTCCGC TCCCGCCAGC CAATCTACAT GAGCCTAGCT 
GGCTGGACTT GTCGGGACGA CTGCAAGTAT GAGTGTATGT GGCTCACTGT TGGTCTCTAT 
CTTCAGGAGG GCTACAGAGT GCCTCAGTTC CATGGCAAGG TGTCTCTCAA TGCTTGGTTC 
TGGTCCACAG TCTTCCATAC CAGGGACACT GACCTCACAG AGAAGATGGA CTACTTCTGT 
GCTTCAGCCG TCATCCTGCA TTCTGTTTAC CTGTGCTGTG TCAGGACCGT GGGACTGCAG 
CACCCGACCG TGGCCAGTGC CTTCGGTGCC CTGCTGCTGC TGCTGCTGAC AGGACACATC 
TCCTACCTGA GCCTTGTCCA TTTCGACTAC GGCTACAATA TGATGGCCAA TGTGGCTATA 
GGCCTGGTGA ATCTGGCGTG GTGGCTGGTC TGGTGCCTAC GGAACCACCG GCGCCTACCT 
CACACCCGCA GGTGTATGGT GGTGGTGGTG CTGCTGCAGG GGCTGTCCCT GCTGGAGCTG 
CTCGACTTCC CTCCCCTCTT CTGGGTGCTG GATGCTCATG CCATCTGGCA CATCAGCACC 
ATCCCCGTCC ACACCCTCTT CTTCAGATTT CTGGAAGACG ACAGCCTATA CCTACTGAAG 
GAATCTGAAG CTATGTTCAA GCTGGACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

PER1 is required for GPI-phospholipase A2 activity and involved in lipid remodeling of GPI-anchored proteins.
Molecular biology of the cell17(12)5253-64(2006 Dec)
Fujita M,Umemura M,Yoko-o T,Jigami Y

Gene and alternative splicing annotation with AIR.
Genome research15(1)54-66(2005 Jan)
Florea L,Di Francesco V,Miller J,Turner R,Yao A,Harris M,Walenz B,Mobarry C,Merkulov GV,Charlab R,Dew I,Deng Z,Istrail S,Li P,Sutton G

Identification of the CAB2/hCOS16 gene required for the repair of DNA double-strand breaks on a core amplified region of the 17q12 locus in breast and gastric cancers.
Japanese journal of cancer research : Gann93(11)1183-6(2002 Nov)
Nezu M,Nishigaki M,Ishizuka T,Kuwahara Y,Tanabe C,Aoyagi K,Sakamoto H,Saito Y,Yoshida T,Sasaki H,Terada M

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Pgap3 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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