| Gene Symbol | Tfec |
| Entrez Gene ID | 26296 |
| Full Name | transcription factor EC |
| Synonyms | Tcfec |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Rattus norvegicus(Norway rat) |
| Genome | |
| Summary | basic helix-loop-helix (BHLH) DNA-binding protein; contains a leucine zipper motif; forms heterodimers with TFE3 and inhibits TFE3-dependent transcription activation [RGD, Feb 2006]. |
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Tfec cDNA ORF clone, Rattus norvegicus(Norway rat)
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Gene
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Clones
gRNAs
The following Tfec gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tfec cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID ORa02322 Clone ID Related Accession (Same CDS sequence) NM_022379.1 Accession Version NM_022379.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 954bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1568908800000 Organism Rattus norvegicus(Norway rat) Product transcription factor EC Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from L08812.1. On or before Oct 13, 2007 this sequence version replaced XM_342644.1, XM_001058616.1. ##Evidence-Data-START## Transcript exon combination :: L08812.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906351 [ECO:0000348] ##Evidence-Data-END##
1
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841
901ATGACTCTTG ACCATCGGTT GTTCAGCCAG ACTCTCAAGA GAGCACAGCC TCTAGCAGCA
AGCTGCATGC CTCTGGCAGA GCATGGACCC AGGAGCCCAG ACAGTGATGC TGGCTGTGCA
GGAAACCCAT TCACAAATCC TCTGGCTCTT GGGAAAGAAG ATGGCGTTGT GGAATGGCGG
TTGTCTGGTA GTATTTTGGA TGTATATAGT GGCGAGCAGG GCATTTCTCC AGTTAACACT
GGTCTTATGA ATGCTTCTTG TCCAAGTATT CTACCCATGA AGAAGGAAAT TGCAGAAACT
GACACTAGAG CTTTGGCAAA GGAGAGACAG AAAAAGGACA ACCACAACCT CATTGAAAGA
AGAAGAAGGT ATAATATTAA TTACAGAATC AAGGAGCTTG GCACTCTTAT TCCAAAGTCT
AATGATCCTG ATATACGCTG GAACAAAGGA ACCATTCTAA AAGCATCAGT GGACTACATC
AAGTGGCTAC AAAAAGAACA ACAGAGAGCC CGGGAGTTAG AACACAGGCA GAAGAAATTA
GAGCATGCTA ACCGGCAGCT TATGCTCCGC ATTCAGGAGC TAGAAATACA AGCACGTGCT
CATGGTCTAC CAATCCTGGC TTCACTCGGC ACAGCTGACT TTGGTACCCA CATCACTAAA
CAGCAGACCC ATTCTGAGAA GAACTCAGTA GGCTGTTGCC AACAACTGAC TCCATCCCAG
GGGACAAGCC CGGAGTTCTA TGAGCAAGCT GTGGCTTTCT CTGATCCACT GTCTCACTTC
ACAGATTTAT CGTTTAGTGC TGCTTTGAAA GAGGAGCAAA GATTGGATGG TATGCTACTA
AGTGATACAA TATGCCCCTT TGGGACGGAC CCGCTACTCT CTGCCATTTC TCCTGCAGTT
TCCAAAGCGA GCAGTCGAAG CAGCCTTAGC TCAGAGGATG GCGATGAACT GTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_071774.1 CDS 211..1164 Translation 
Target ORF information:
RefSeq Version NM_022379.1 Organism Rattus norvegicus(Norway rat) Definition Rattus norvegicus transcription factor EC (Tfec), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_022379.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGACTCTTG ACCATCGGTT GTTCAGCCAG ACTCTCAAGA GAGCACAGCC TCTAGCAGCA
AGCTGCATGC CTCTGGCAGA GCATGGACCC AGGAGCCCAG ACAGTGATGC TGGCTGTGCA
GGAAACCCAT TCACAAATCC TCTGGCTCTT GGGAAAGAAG ATGGCGTTGT GGAATGGCGG
TTGTCTGGTA GTATTTTGGA TGTATATAGT GGCGAGCAGG GCATTTCTCC AGTTAACACT
GGTCTTATGA ATGCTTCTTG TCCAAGTATT CTACCCATGA AGAAGGAAAT TGCAGAAACT
GACACTAGAG CTTTGGCAAA GGAGAGACAG AAAAAGGACA ACCACAACCT CATTGAAAGA
AGAAGAAGGT ATAATATTAA TTACAGAATC AAGGAGCTTG GCACTCTTAT TCCAAAGTCT
AATGATCCTG ATATACGCTG GAACAAAGGA ACCATTCTAA AAGCATCAGT GGACTACATC
AAGTGGCTAC AAAAAGAACA ACAGAGAGCC CGGGAGTTAG AACACAGGCA GAAGAAATTA
GAGCATGCTA ACCGGCAGCT TATGCTCCGC ATTCAGGAGC TAGAAATACA AGCACGTGCT
CATGGTCTAC CAATCCTGGC TTCACTCGGC ACAGCTGACT TTGGTACCCA CATCACTAAA
CAGCAGACCC ATTCTGAGAA GAACTCAGTA GGCTGTTGCC AACAACTGAC TCCATCCCAG
GGGACAAGCC CGGAGTTCTA TGAGCAAGCT GTGGCTTTCT CTGATCCACT GTCTCACTTC
ACAGATTTAT CGTTTAGTGC TGCTTTGAAA GAGGAGCAAA GATTGGATGG TATGCTACTA
AGTGATACAA TATGCCCCTT TGGGACGGAC CCGCTACTCT CTGCCATTTC TCCTGCAGTT
TCCAAAGCGA GCAGTCGAAG CAGCCTTAGC TCAGAGGATG GCGATGAACT GTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID ORa27055 Clone ID Related Accession (Same CDS sequence) XM_006236128.3 Accession Version XM_006236128.3 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 840bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1469376000000 Organism Rattus norvegicus(Norway rat) Product transcription factor EC isoform X1 Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006236128.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##
1
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181
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361
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481
541
601
661
721
781ATGATGAAGG AGAAAGAAAA AACCATCGCT ATTGTGAAGG TTATAGACTC TTCCAAGTTG
AAACTGTTGT CTGGTAGTAT TTTGGATGTA TATAGTGGCG AGCAGGGCAT TTCTCCAGTT
AACACTGGTC TTATGAATGC TTCTTGTCCA AGTATTCTAC CCATGAAGAA GGAAATTGCA
GAAACTGACA CTAGAGCTTT GGCAAAGGAG AGACAGAAAA AGGACAACCA CAACCTCATT
GAAAGAAGAA GAAGGTATAA TATTAATTAC AGAATCAAGG AGCTTGGCAC TCTTATTCCA
AAGTCTAATG ATCCTGATAT ACGCTGGAAC AAAGGAACCA TTCTAAAAGC ATCAGTGGAC
TACATCAAGT GGCTACAAAA AGAACAACAG AGAGCCCGGG AGTTAGAACA CAGACAGAAG
AAATTAGAGC ATGCTAACCG GCAGCTTATG CTCCGCATTC AGGAGCTAGA AATACAAGCA
CGTGCTCATG GTCTACCAAT CCTGGCTTCA CTCGGCACAG CTGACTTTGG TACCCACATC
ACTAAACAGC AGACCCATTC TGAGAAGAAC TCAGTAGGCT GTTGCCAACA ACTGACTCCA
TCCCAGGGGA CAAGCCCGGA GTTCTATGAG CAAGCTGTGG CTTTCTCTGA TCCACTGTCT
CACTTCACAG ATTTATCGTT TAGTGCTGCT TTGAAAGAGG AGCAAAGATT GGATGGTATG
CTACTAAGTG ATACAATATG CCCCTTTGGG ACGGACCCGC TACTCTCTGC CATTTCTCCT
GCAGTTTCCA AAGCGAGCAG TCGAAGCAGC CTTAGCTCAG AGGATGGCGA TGAACTGTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq XP_006236190.1 CDS 589..1428 Translation
Target ORF information:
RefSeq Version XM_006236128.3 Organism Rattus norvegicus(Norway rat) Definition Rattus norvegicus transcription factor EC (Tfec), transcript variant X1, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK XM_006236128.3
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781ATGATGAAGG AGAAAGAAAA AACCATCGCT ATTGTGAAGG TTATAGACTC TTCCAAGTTG
AAACTGTTGT CTGGTAGTAT TTTGGATGTA TATAGTGGCG AGCAGGGCAT TTCTCCAGTT
AACACTGGTC TTATGAATGC TTCTTGTCCA AGTATTCTAC CCATGAAGAA GGAAATTGCA
GAAACTGACA CTAGAGCTTT GGCAAAGGAG AGACAGAAAA AGGACAACCA CAACCTCATT
GAAAGAAGAA GAAGGTATAA TATTAATTAC AGAATCAAGG AGCTTGGCAC TCTTATTCCA
AAGTCTAATG ATCCTGATAT ACGCTGGAAC AAAGGAACCA TTCTAAAAGC ATCAGTGGAC
TACATCAAGT GGCTACAAAA AGAACAACAG AGAGCCCGGG AGTTAGAACA CAGACAGAAG
AAATTAGAGC ATGCTAACCG GCAGCTTATG CTCCGCATTC AGGAGCTAGA AATACAAGCA
CGTGCTCATG GTCTACCAAT CCTGGCTTCA CTCGGCACAG CTGACTTTGG TACCCACATC
ACTAAACAGC AGACCCATTC TGAGAAGAAC TCAGTAGGCT GTTGCCAACA ACTGACTCCA
TCCCAGGGGA CAAGCCCGGA GTTCTATGAG CAAGCTGTGG CTTTCTCTGA TCCACTGTCT
CACTTCACAG ATTTATCGTT TAGTGCTGCT TTGAAAGAGG AGCAAAGATT GGATGGTATG
CTACTAAGTG ATACAATATG CCCCTTTGGG ACGGACCCGC TACTCTCTGC CATTTCTCCT
GCAGTTTCCA AAGCGAGCAG TCGAAGCAGC CTTAGCTCAG AGGATGGCGA TGAACTGTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
Analysis of HSF4 binding regions reveals its necessity for gene regulation during development and heat shock response in mouse lenses.
The Journal of biological chemistry283(44)29961-70(2008 Oct)
Fujimoto M,Oshima K,Shinkawa T,Wang BB,Inouye S,Hayashida N,Takii R,Nakai A
High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence.
Genome research14(4)750-7(2004 Apr)
Kwitek AE,Gullings-Handley J,Yu J,Carlos DC,Orlebeke K,Nie J,Eckert J,Lemke A,Andrae JW,Bromberg S,Pasko D,Chen D,Scheetz TE,Casavant TL,Soares MB,Sheffield VC,Tonellato PJ,Jacob HJ
TFEC, a basic helix-loop-helix protein, forms heterodimers with TFE3 and inhibits TFE3-dependent transcription activation.
Molecular and cellular biology13(8)4505-12(1993 Aug)
Zhao GQ,Zhao Q,Zhou X,Mattei MG,de Crombrugghe B
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