ORF » Species Summary » Populus trichocarpa » LOC7489779 cDNA ORF clone

LOC7489779 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7489779 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7489779 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa12733 XM_002307280.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0005s19290g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa430655 XM_024602303.1
Latest version!		 Populus trichocarpa peptidyl-prolyl cis-trans isomerase CYP65 (LOC7489779), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7489779 ( XM_002307280.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002307316.2 Populus trichocarpa hypothetical protein (POPTR_0005s19290g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa12733
    Clone ID Related Accession (Same CDS sequence) XM_002307280.2
    Accession Version XM_002307280.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1569bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). On Dec 16, 2013 this sequence version replaced XM_002307280.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGGAAGA AACAGCACAG CAAAGATCGA ATGTACATAA CAAAAACAGA ATGGGCCACG 
    GAATGGGGCG GTGCCAAATC CAAACAACTC CAAACTCCTT TCAAACGTCT TCCTTTCTAT 
    TGCTGCGCCC TTACATTTAC GCCGTTTGAG TTTCCAGTTT GCACAGCAGA TGGCAGTGTA 
    TTTGATTTAA TGCACATAAC TCCGTACATA AGGAAGTATG GGAAGCATCC TGTTACCGGA 
    GCTCCGTTAA AGCAGGGTGA TCTTATACCA CTCAATTTCC ATAAGAATTC TGAAGGAGAG 
    TATCATTGCC CTGTGCTGAA CAAAGTTTTT ACAGAATTCA CACATATAGT TTCTGTGAAG 
    ACTACAGGAA ATGTGTTCTG CTATGAGGCA ATTAAAGAAT TAAACATCAA GACAAAAAAC 
    TGGAAAGAAC TACTGACAGA TGAACTGTTC ACAAAGGATG ACCTCATAAC AATTCAGAAG 
    ATGAGTTCAG ATCCATCTTA TAATATAAAC ATATCTGGAG ATATCAAGCA AATGTTGGCA 
    GAGCTTGGAA CCGAGAAAGG AAGGCAAATT GCTCTTCATG GAGGTGGAGG CAGCAAGGCA 
    CAAAATGAAA GGGCTGCTGC CCTTGTTGCC ATTTTGGCTG CCAGGTCACG CATTAAAGAG 
    GATCCCCAAT CAACTTCAAA CAAACTTCCA AGAGCTTATA GTATTAGCCG TTTTACAACT 
    GGTGCTGCTT CACGATCCTT CACTTCAACC TCTTTTGATC CTGTCACAAA AAATGAGTTT 
    GAATATGTCA AAGTTGAAAA AAATCCAAAG AAGAAAGGTT ATGTTCAGCT GCAGACAACA 
    CATGGAGATC TAAACATTGA GCTTCACTGT GATATAACTC CAAGGACTTG TGAGAACTTC 
    ATCACTCATT GTGAGCGAGG TTATTATACT GGAGTGGCTT TTCATAGAAG CATTCGGAAT 
    TTTATGATTC AAGGTGGTGA TCCTACTGGC ACTGGGAGAG GAGGCGAATC TATATGGGGG 
    AAGCCTTTCA ATGATGAGCC AAACTCCAAG TTGCTCCACT CTGGAAGGGG TGTTGTCAGC 
    ATGGCTAATA GTGGTCCCCA CACCAATGGT TCTCAGTTTT TCATCCTCTA CAAGTCTGCC 
    AATCATTTGA ACTTTAAACA TACAGTTTTT GGTGGAGTTG TTGGTGGCAT GACTACATTG 
    GCGGCAATGG AAAAAGTTCC TGTTGATGAC AATGACCGAC CTCTGGAGGA GATAAAGATA 
    ACTAGTGTAA CGGTATTTGT CAATCCTTAC ACAGAACTTG ATGAAGAAGA GCAAGAGAAG 
    GCTAAAGATG AGAAGGATAT CGGGGACGAA GAGAATGAAA AGATTGGGTC ATGGTATAGC 
    AATCCAGGCA CAGGAACTAC AGAAAGTGGA ACTGTGGGTG GTGGTGGTGG TGTTGGAAAG 
    TACTTGAAAG CAAAAAATGC TAAAACTGAA TCCACTGCAA TCGACAGTGG TTCATCAACA 
    ATTGCTGTGA CGAAGAAAAG GAAAGTGGGA GTTTCGACAG CGGAGTTCAA GGACTTCTCT 
    GGCTGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307316.2
    CDS191..1759
    Translation

    Target ORF information:

    RefSeq Version XM_002307280.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0005s19290g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307280.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGGAAGA AACAGCACAG CAAAGATCGA ATGTACATAA CAAAAACAGA ATGGGCCACG 
    GAATGGGGCG GTGCCAAATC CAAACAACTC CAAACTCCTT TCAAACGTCT TCCTTTCTAT 
    TGCTGCGCCC TTACATTTAC GCCGTTTGAG TTTCCAGTTT GCACAGCAGA TGGCAGTGTA 
    TTTGATTTAA TGCACATAAC TCCGTACATA AGGAAGTATG GGAAGCATCC TGTTACCGGA 
    GCTCCGTTAA AGCAGGGTGA TCTTATACCA CTCAATTTCC ATAAGAATTC TGAAGGAGAG 
    TATCATTGCC CTGTGCTGAA CAAAGTTTTT ACAGAATTCA CACATATAGT TTCTGTGAAG 
    ACTACAGGAA ATGTGTTCTG CTATGAGGCA ATTAAAGAAT TAAACATCAA GACAAAAAAC 
    TGGAAAGAAC TACTGACAGA TGAACTGTTC ACAAAGGATG ACCTCATAAC AATTCAGAAG 
    ATGAGTTCAG ATCCATCTTA TAATATAAAC ATATCTGGAG ATATCAAGCA AATGTTGGCA 
    GAGCTTGGAA CCGAGAAAGG AAGGCAAATT GCTCTTCATG GAGGTGGAGG CAGCAAGGCA 
    CAAAATGAAA GGGCTGCTGC CCTTGTTGCC ATTTTGGCTG CCAGGTCACG CATTAAAGAG 
    GATCCCCAAT CAACTTCAAA CAAACTTCCA AGAGCTTATA GTATTAGCCG TTTTACAACT 
    GGTGCTGCTT CACGATCCTT CACTTCAACC TCTTTTGATC CTGTCACAAA AAATGAGTTT 
    GAATATGTCA AAGTTGAAAA AAATCCAAAG AAGAAAGGTT ATGTTCAGCT GCAGACAACA 
    CATGGAGATC TAAACATTGA GCTTCACTGT GATATAACTC CAAGGACTTG TGAGAACTTC 
    ATCACTCATT GTGAGCGAGG TTATTATACT GGAGTGGCTT TTCATAGAAG CATTCGGAAT 
    TTTATGATTC AAGGTGGTGA TCCTACTGGC ACTGGGAGAG GAGGCGAATC TATATGGGGG 
    AAGCCTTTCA ATGATGAGCC AAACTCCAAG TTGCTCCACT CTGGAAGGGG TGTTGTCAGC 
    ATGGCTAATA GTGGTCCCCA CACCAATGGT TCTCAGTTTT TCATCCTCTA CAAGTCTGCC 
    AATCATTTGA ACTTTAAACA TACAGTTTTT GGTGGAGTTG TTGGTGGCAT GACTACATTG 
    GCGGCAATGG AAAAAGTTCC TGTTGATGAC AATGACCGAC CTCTGGAGGA GATAAAGATA 
    ACTAGTGTAA CGGTATTTGT CAATCCTTAC ACAGAACTTG ATGAAGAAGA GCAAGAGAAG 
    GCTAAAGATG AGAAGGATAT CGGGGACGAA GAGAATGAAA AGATTGGGTC ATGGTATAGC 
    AATCCAGGCA CAGGAACTAC AGAAAGTGGA ACTGTGGGTG GTGGTGGTGG TGTTGGAAAG 
    TACTTGAAAG CAAAAAATGC TAAAACTGAA TCCACTGCAA TCGACAGTGG TTCATCAACA 
    ATTGCTGTGA CGAAGAAAAG GAAAGTGGGA GTTTCGACAG CGGAGTTCAA GGACTTCTCT 
    GGCTGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7489779 ( XM_024602303.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024458071.1 Populus trichocarpa peptidyl-prolyl cis-trans isomerase CYP65 (LOC7489779), mRNA.
    Price & Availability↑
    CloneID OPa430655
    Clone ID Related Accession (Same CDS sequence) XM_024602303.1
    Accession Version XM_024602303.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1788bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product peptidyl-prolyl cis-trans isomerase CYP65
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGGGAAGA AACAGCACAG CAAAGATCGA ATGTACATAA CAAAAACAGA ATGGGCCACG 
    GAATGGGGCG GTGCCAAATC CAAACAACTC CAAACTCCTT TCAAACGTCT TCCTTTCTAT 
    TGCTGCGCCC TTACATTTAC GCCGTTTGAG TTTCCAGTTT GCACAGCAGA TGGCAGTGTA 
    TTTGATTTAA TGCACATAAC TCCGTACATA AGGAAGTATG GGAAGCATCC TGTTACCGGA 
    GCTCCGTTAA AGCAGGGTGA TCTTATACCA CTCAATTTCC ATAAGAATTC TGAAGGAGAG 
    TATCATTGCC CTGTGCTGAA CAAAGTTTTT ACAGAATTCA CACATATAGT GTCTGTGAAG 
    ACTACAGGAA ATGTGTTCTG CTATGAGGCA ATTAAAGAAT TAAACATCAA GACAAAAAAC 
    TGGAAAGAAC TACTGACAGA TGAACTGTTC ACAAAGGATG ACCTCATAAC AATTCAGAAT 
    CCAAATGCCA TTGATAGTAG GAGTACTCTT GATTTTGATC ATGTTAAGAA TGCTCTGGAA 
    ATTGATGATG AAGAGCTAAA GAAGATGAGT TCGGATCCAT CTTATAATAT AAACATATCT 
    GGAGATATCA AGCAAATGTT GGCAGAGCTT GGAACCGAGA AAGGAAGGCA AATTGCTCTT 
    CATGGAGGTG GAGGCAGCAA GGCACAAAAT GAAAGGGCTG CTGCCCTTGT TGCCATTTTG 
    GCTGCCAGGT CACGCATTAA AGAGGATCCC CAATCAACTT CAAACAAACT TCCAAGAGCT 
    TATAGTATTG TAGATGCTGC ATCTGCTTCA GTTCATGGAA GAAGTGCAGC AGCAGCTAAA 
    GCTGCACCAG ATGACAAAAC TGCTGCTCGG ATAGCTATGC ACATGGCTGG TGAGAGGGCG 
    CCTGTGAATT CAACAATGGT AAAGAGCCGT TTTACAACTG GTGCTGCTTC ACGATCCTTC 
    ACTTCAACCT CTTTTGATCC TGTCACAAAA AATGAGTTTG AATATGTCAA AGTTGAAAAA 
    AATCCAAAGA AGAAAGGTTA TGTTCAGCTG CAGACAACAC ATGGAGATCT AAACATTGAG 
    CTTCACTGTG ATATAACTCC AAGGACTTGT GAGAACTTCA TCACTCATTG TGAGCGAGGT 
    TATTATACTG GAGTGGCTTT TCATAGAAGC ATTCGGAATT TTATGATTCA AGGTGGTGAT 
    CCTACTGGCA CTGGGAGAGG AGGCGAATCT ATATGGGGGA AGCCTTTCAA CGATGAGCCA 
    AACTCCAAGT TGCTCCACTC TGGAAGGGGT GTTGTCAGCA TGGCTAATAG TGGTCCCCAC 
    ACCAATGGTT CTCAGTTTTT CATCCTCTAC AAGTCTGCCA ATCATTTGAA CTTTAAACAT 
    ACAGTTTTTG GTGGAGTTGT TGGTGGCATG ACTACATTGG CGGCAATGGA AAAAGTTCCT 
    GTTGATGACA ATGACCGACC TCTGGAGGAG ATAAAGATAA CTAGTGTAAC GGTATTTGTC 
    AATCCTTACA CAGAACTTGA TGAAGAAGAG CAAGAGAAGG CTAAAGATGA GAAGGATATC 
    GGGGACGAAG AGAATGAAAA GATTGGGTCA TGGTATAGCA ATCCAGGCAC AGGAACTACA 
    GAAAGTGGAA CTGTGGGTGG TGGTGGTGGT GTTGGAAAGT ACTTGAAAGC AAAAAATGCT 
    AAAACTGAAT CCACTGCAAT CGACAGTGGT TCATCAACAA TTGCTGTGAC GAAGAAAAGG 
    AAAGTGGGAG TTTCGACAGC GGAGTTCAAG GACTTCTCTG GCTGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024458071.1
    CDS1..1788
    Translation

    Target ORF information:

    RefSeq Version XM_024602303.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa peptidyl-prolyl cis-trans isomerase CYP65 (LOC7489779), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024602303.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGGGAAGA AACAGCACAG CAAAGATCGA ATGTACATAA CAAAAACAGA ATGGGCCACG 
    GAATGGGGCG GTGCCAAATC CAAACAACTC CAAACTCCTT TCAAACGTCT TCCTTTCTAT 
    TGCTGCGCCC TTACATTTAC GCCGTTTGAG TTTCCAGTTT GCACAGCAGA TGGCAGTGTA 
    TTTGATTTAA TGCACATAAC TCCGTACATA AGGAAGTATG GGAAGCATCC TGTTACCGGA 
    GCTCCGTTAA AGCAGGGTGA TCTTATACCA CTCAATTTCC ATAAGAATTC TGAAGGAGAG 
    TATCATTGCC CTGTGCTGAA CAAAGTTTTT ACAGAATTCA CACATATAGT GTCTGTGAAG 
    ACTACAGGAA ATGTGTTCTG CTATGAGGCA ATTAAAGAAT TAAACATCAA GACAAAAAAC 
    TGGAAAGAAC TACTGACAGA TGAACTGTTC ACAAAGGATG ACCTCATAAC AATTCAGAAT 
    CCAAATGCCA TTGATAGTAG GAGTACTCTT GATTTTGATC ATGTTAAGAA TGCTCTGGAA 
    ATTGATGATG AAGAGCTAAA GAAGATGAGT TCGGATCCAT CTTATAATAT AAACATATCT 
    GGAGATATCA AGCAAATGTT GGCAGAGCTT GGAACCGAGA AAGGAAGGCA AATTGCTCTT 
    CATGGAGGTG GAGGCAGCAA GGCACAAAAT GAAAGGGCTG CTGCCCTTGT TGCCATTTTG 
    GCTGCCAGGT CACGCATTAA AGAGGATCCC CAATCAACTT CAAACAAACT TCCAAGAGCT 
    TATAGTATTG TAGATGCTGC ATCTGCTTCA GTTCATGGAA GAAGTGCAGC AGCAGCTAAA 
    GCTGCACCAG ATGACAAAAC TGCTGCTCGG ATAGCTATGC ACATGGCTGG TGAGAGGGCG 
    CCTGTGAATT CAACAATGGT AAAGAGCCGT TTTACAACTG GTGCTGCTTC ACGATCCTTC 
    ACTTCAACCT CTTTTGATCC TGTCACAAAA AATGAGTTTG AATATGTCAA AGTTGAAAAA 
    AATCCAAAGA AGAAAGGTTA TGTTCAGCTG CAGACAACAC ATGGAGATCT AAACATTGAG 
    CTTCACTGTG ATATAACTCC AAGGACTTGT GAGAACTTCA TCACTCATTG TGAGCGAGGT 
    TATTATACTG GAGTGGCTTT TCATAGAAGC ATTCGGAATT TTATGATTCA AGGTGGTGAT 
    CCTACTGGCA CTGGGAGAGG AGGCGAATCT ATATGGGGGA AGCCTTTCAA CGATGAGCCA 
    AACTCCAAGT TGCTCCACTC TGGAAGGGGT GTTGTCAGCA TGGCTAATAG TGGTCCCCAC 
    ACCAATGGTT CTCAGTTTTT CATCCTCTAC AAGTCTGCCA ATCATTTGAA CTTTAAACAT 
    ACAGTTTTTG GTGGAGTTGT TGGTGGCATG ACTACATTGG CGGCAATGGA AAAAGTTCCT 
    GTTGATGACA ATGACCGACC TCTGGAGGAG ATAAAGATAA CTAGTGTAAC GGTATTTGTC 
    AATCCTTACA CAGAACTTGA TGAAGAAGAG CAAGAGAAGG CTAAAGATGA GAAGGATATC 
    GGGGACGAAG AGAATGAAAA GATTGGGTCA TGGTATAGCA ATCCAGGCAC AGGAACTACA 
    GAAAGTGGAA CTGTGGGTGG TGGTGGTGGT GTTGGAAAGT ACTTGAAAGC AAAAAATGCT 
    AAAACTGAAT CCACTGCAAT CGACAGTGGT TCATCAACAA TTGCTGTGAC GAAGAAAAGG 
    AAAGTGGGAG TTTCGACAGC GGAGTTCAAG GACTTCTCTG GCTGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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