ORF » Species Summary » Populus trichocarpa » LOC7489415 cDNA ORF clone

LOC7489415 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7489415 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7489415 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa23764 XM_002315988.3
Latest version!		 Populus trichocarpa dihydrolipoyl dehydrogenase 2, chloroplastic (LOC7489415), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa23764 XM_024611329.1
Latest version!		 Populus trichocarpa dihydrolipoyl dehydrogenase 2, chloroplastic (LOC7489415), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OPa23764 XM_002315988.2 Populus trichocarpa hypothetical protein (POPTR_0010s15200g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7489415 ( XM_002315988.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002316024.2 Populus trichocarpa hypothetical protein (POPTR_0010s15200g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa23764
    Clone ID Related Accession (Same CDS sequence) XM_002315988.2 , XM_002315988.3 , XM_024611329.1
    Accession Version XM_002315988.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1731bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). On Dec 16, 2013 this sequence version replaced XM_002315988.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCATTCCT CGGCAACTCT CTCGCTCTCT CAGCCCGCAG CAGCCTCAAC CATTCCCAAA 
    TCAAACTACA CGGTTAATCA CTCCCTCCCT TTCTCCCCTT CTAAGCCCAT AAATCTCCGT 
    TTCTGCGGTC TTAGAAGAGA AGCATTTTCA GGCTTCTCTT CTCTCTCTCG CTCTCAACCC 
    CCCCAAAGTA AAATCCATTC TAATAAAATT AACAGTGCAA TCTCAGCTTC TTTATCTGAT 
    AATGGAAGCG CGCCAAAGTC ATTTGATTAT GATTTGGTCA TTATCGGTGC TGGTGTTGGC 
    GGCCATGGTG CCGCTCTTCA CGCTGTTGAG AAGGGTTTGA AAACTGCTAT TATTGAAGGA 
    GATGTGATAG GGGGGACATG TGTGAACAGA GGCTGTGTTC CTTCAAAGGC TCTTTTAGCT 
    GTAAGTGGCC GGATGCGTGA ACTACAGAAC GAGCATCACA TGAAAGCTTT GGGTTTGCAG 
    GTTGCAGCTG CTGGATATGA TAGACAAGGA GTGGCAGATC ATGCCAATAA TCTTGCTACA 
    AAAATTCGTA ATAATTTAAC GAACTCGATG AAGGCCTTGG GTGTGGATAT ATTGACTGGT 
    GTTGGCTCAA TTATGGGCCC ACACAAGGTG CGATATGGGA AACTTGATTC TCCAGGCGAC 
    ATAGTGACTG CTAAAGATAT AATCATTGCT ACTGGTTCTG TCCCTTTTGT ACCCAAGGGC 
    ATCGAAGTTG ATGGGAAGAC TGTAATCACA AGTGACCATG CACTCAAACT GGAGTCTGTT 
    CCCGATTGGA TAGCAATTGT AGGAAGTGGT TATATTGGTC TAGAATTCAG TGATGTGTAT 
    ACTGCCCTTG GAAGTGAGGT CACCTTTATT GAAGCCCTTG ATCAGCTCAT GCCTGGATTT 
    GATCCTGAGA TTGGAAAGTT GGCTCAAAGG GTCCTAATTA ATCCACGCAA AATCGACTAT 
    CATACTGGAG TATTTGCAAC CAAGATCACT CCAGCTAAGA ATGGGAAACC AGTTACCATT 
    GAGCTCATTG ACGCCAAGAC CAAGGAACCC AAAGATACTC TAGAGGTAGA TGCAGCATTA 
    ATTGCAACTG GAAGGGCTCC TTTCACAGAT GGTCTTGGCT TGGACAGTGT CCATGTAGAA 
    AGGAAACGTG GTTTTGTTCC TGTTGATGAG AGGATGCGTG TCCTAGATTT TAAGGGGGAT 
    CCGGTTCCTC ACTTGTATTG CATTGGTGAT GCTAATGGTA AAATGATGCT TGCTCATGCG 
    GCCAGTGCAC AAGGAATTTC AGTGATTGAA CAAATCACTG GAAGGGATCA CGTGCTAAAT 
    CATTTGAGCA TTCCGGCAGC TTGTTTCACT CACCCTGAAA TCAGTATGGT TGGATTGACA 
    GAGCCTCAAG CAAGGGAGAA AGCTGAAAAG GAGGGTTTTG AAGTAAGTGT TGCCAAGACA 
    AGTTTCAAGG CCAACACAAA GGCCTTGGCA GAAAATGAAG GAGAGGGGCT AGCTAAGTTG 
    ATATATAGAC CCGACAATGG AGAGATACTT GGCGTGCATA TTTTTGGGTT GCATGCCGCA 
    GATCTCATCC ATGAAGCATC CAATGCTATA GCTTTGGGCA CGCGTATTCA GGACATAAAA 
    TTTGCAGTTC ATGCACACCC AACACTATCA GAAGTTATTG ACGAACTTTT CAAATCAGCA 
    AAGGTTAAAG CTCATGTTTC AGGCCCAGTA AGTGAACCAG TTGCTGTCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002316024.2
    CDS153..1883
    Translation

    Target ORF information:

    RefSeq Version XM_002315988.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0010s15200g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002315988.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCATTCCT CGGCAACTCT CTCGCTCTCT CAGCCCGCAG CAGCCTCAAC CATTCCCAAA 
    TCAAACTACA CGGTTAATCA CTCCCTCCCT TTCTCCCCTT CTAAGCCCAT AAATCTCCGT 
    TTCTGCGGTC TTAGAAGAGA AGCATTTTCA GGCTTCTCTT CTCTCTCTCG CTCTCAACCC 
    CCCCAAAGTA AAATCCATTC TAATAAAATT AACAGTGCAA TCTCAGCTTC TTTATCTGAT 
    AATGGAAGCG CGCCAAAGTC ATTTGATTAT GATTTGGTCA TTATCGGTGC TGGTGTTGGC 
    GGCCATGGTG CCGCTCTTCA CGCTGTTGAG AAGGGTTTGA AAACTGCTAT TATTGAAGGA 
    GATGTGATAG GGGGGACATG TGTGAACAGA GGCTGTGTTC CTTCAAAGGC TCTTTTAGCT 
    GTAAGTGGCC GGATGCGTGA ACTACAGAAC GAGCATCACA TGAAAGCTTT GGGTTTGCAG 
    GTTGCAGCTG CTGGATATGA TAGACAAGGA GTGGCAGATC ATGCCAATAA TCTTGCTACA 
    AAAATTCGTA ATAATTTAAC GAACTCGATG AAGGCCTTGG GTGTGGATAT ATTGACTGGT 
    GTTGGCTCAA TTATGGGCCC ACACAAGGTG CGATATGGGA AACTTGATTC TCCAGGCGAC 
    ATAGTGACTG CTAAAGATAT AATCATTGCT ACTGGTTCTG TCCCTTTTGT ACCCAAGGGC 
    ATCGAAGTTG ATGGGAAGAC TGTAATCACA AGTGACCATG CACTCAAACT GGAGTCTGTT 
    CCCGATTGGA TAGCAATTGT AGGAAGTGGT TATATTGGTC TAGAATTCAG TGATGTGTAT 
    ACTGCCCTTG GAAGTGAGGT CACCTTTATT GAAGCCCTTG ATCAGCTCAT GCCTGGATTT 
    GATCCTGAGA TTGGAAAGTT GGCTCAAAGG GTCCTAATTA ATCCACGCAA AATCGACTAT 
    CATACTGGAG TATTTGCAAC CAAGATCACT CCAGCTAAGA ATGGGAAACC AGTTACCATT 
    GAGCTCATTG ACGCCAAGAC CAAGGAACCC AAAGATACTC TAGAGGTAGA TGCAGCATTA 
    ATTGCAACTG GAAGGGCTCC TTTCACAGAT GGTCTTGGCT TGGACAGTGT CCATGTAGAA 
    AGGAAACGTG GTTTTGTTCC TGTTGATGAG AGGATGCGTG TCCTAGATTT TAAGGGGGAT 
    CCGGTTCCTC ACTTGTATTG CATTGGTGAT GCTAATGGTA AAATGATGCT TGCTCATGCG 
    GCCAGTGCAC AAGGAATTTC AGTGATTGAA CAAATCACTG GAAGGGATCA CGTGCTAAAT 
    CATTTGAGCA TTCCGGCAGC TTGTTTCACT CACCCTGAAA TCAGTATGGT TGGATTGACA 
    GAGCCTCAAG CAAGGGAGAA AGCTGAAAAG GAGGGTTTTG AAGTAAGTGT TGCCAAGACA 
    AGTTTCAAGG CCAACACAAA GGCCTTGGCA GAAAATGAAG GAGAGGGGCT AGCTAAGTTG 
    ATATATAGAC CCGACAATGG AGAGATACTT GGCGTGCATA TTTTTGGGTT GCATGCCGCA 
    GATCTCATCC ATGAAGCATC CAATGCTATA GCTTTGGGCA CGCGTATTCA GGACATAAAA 
    TTTGCAGTTC ATGCACACCC AACACTATCA GAAGTTATTG ACGAACTTTT CAAATCAGCA 
    AAGGTTAAAG CTCATGTTTC AGGCCCAGTA AGTGAACCAG TTGCTGTCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7489415 ( XM_002315988.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002316024.2 Populus trichocarpa dihydrolipoyl dehydrogenase 2, chloroplastic (LOC7489415), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa23764
    Clone ID Related Accession (Same CDS sequence) XM_002315988.2 , XM_002315988.3 , XM_024611329.1
    Accession Version XM_002315988.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1731bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product dihydrolipoyl dehydrogenase 2, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002315988.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCATTCCT CGGCAACTCT CTCGCTCTCT CAGCCCGCAG CAGCCTCAAC CATTCCCAAA 
    TCAAACTACA CGGTTAATCA CTCCCTCCCT TTCTCCCCTT CTAAGCCCAT AAATCTCCGT 
    TTCTGCGGTC TTAGAAGAGA AGCATTTTCA GGCTTCTCTT CTCTCTCTCG CTCTCAACCC 
    CCCCAAAGTA AAATCCATTC TAATAAAATT AACAGTGCAA TCTCAGCTTC TTTATCTGAT 
    AATGGAAGCG CGCCAAAGTC ATTTGATTAT GATTTGGTCA TTATCGGTGC TGGTGTTGGC 
    GGCCATGGTG CCGCTCTTCA CGCTGTTGAG AAGGGTTTGA AAACTGCTAT TATTGAAGGA 
    GATGTGATAG GGGGGACATG TGTGAACAGA GGCTGTGTTC CTTCAAAGGC TCTTTTAGCT 
    GTAAGTGGCC GGATGCGTGA ACTACAGAAC GAGCATCACA TGAAAGCTTT GGGTTTGCAG 
    GTTGCAGCTG CTGGATATGA TAGACAAGGA GTGGCAGATC ATGCCAATAA TCTTGCTACA 
    AAAATTCGTA ATAATTTAAC GAACTCGATG AAGGCCTTGG GTGTGGATAT ATTGACTGGT 
    GTTGGCTCAA TTATGGGCCC ACACAAGGTG CGATATGGGA AACTTGATTC TCCAGGCGAC 
    ATAGTGACTG CTAAAGATAT AATCATTGCT ACTGGTTCTG TCCCTTTTGT ACCCAAGGGC 
    ATCGAAGTTG ATGGGAAGAC TGTAATCACA AGTGACCATG CACTCAAACT GGAGTCTGTT 
    CCCGATTGGA TAGCAATTGT AGGAAGTGGT TATATTGGTC TAGAATTCAG TGATGTGTAT 
    ACTGCCCTTG GAAGTGAGGT CACCTTTATT GAAGCCCTTG ATCAGCTCAT GCCTGGATTT 
    GATCCTGAGA TTGGAAAGTT GGCTCAAAGG GTCCTAATTA ATCCACGCAA AATCGACTAT 
    CATACTGGAG TATTTGCAAC CAAGATCACT CCAGCTAAGA ATGGGAAACC AGTTACCATT 
    GAGCTCATTG ACGCCAAGAC CAAGGAACCC AAAGATACTC TAGAGGTAGA TGCAGCATTA 
    ATTGCAACTG GAAGGGCTCC TTTCACAGAT GGTCTTGGCT TGGACAGTGT CCATGTAGAA 
    AGGAAACGTG GTTTTGTTCC TGTTGATGAG AGGATGCGTG TCCTAGATTT TAAGGGGGAT 
    CCGGTTCCTC ACTTGTATTG CATTGGTGAT GCTAATGGTA AAATGATGCT TGCTCATGCG 
    GCCAGTGCAC AAGGAATTTC AGTGATTGAA CAAATCACTG GAAGGGATCA CGTGCTAAAT 
    CATTTGAGCA TTCCGGCAGC TTGTTTCACT CACCCTGAAA TCAGTATGGT TGGATTGACA 
    GAGCCTCAAG CAAGGGAGAA AGCTGAAAAG GAGGGTTTTG AAGTAAGTGT TGCCAAGACA 
    AGTTTCAAGG CCAACACAAA GGCCTTGGCA GAAAATGAAG GAGAGGGGCT AGCTAAGTTG 
    ATATATAGAC CCGACAATGG AGAGATACTT GGCGTGCATA TTTTTGGGTT GCATGCCGCA 
    GATCTCATCC ATGAAGCATC CAATGCTATA GCTTTGGGCA CGCGTATTCA GGACATAAAA 
    TTTGCAGTTC ATGCACACCC AACACTATCA GAAGTTATTG ACGAACTTTT CAAATCAGCA 
    AAGGTTAAAG CTCATGTTTC AGGCCCAGTA AGTGAACCAG TTGCTGTCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002316024.2
    CDS185..1915
    Translation

    Target ORF information:

    RefSeq Version XM_002315988.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa dihydrolipoyl dehydrogenase 2, chloroplastic (LOC7489415), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002315988.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCATTCCT CGGCAACTCT CTCGCTCTCT CAGCCCGCAG CAGCCTCAAC CATTCCCAAA 
    TCAAACTACA CGGTTAATCA CTCCCTCCCT TTCTCCCCTT CTAAGCCCAT AAATCTCCGT 
    TTCTGCGGTC TTAGAAGAGA AGCATTTTCA GGCTTCTCTT CTCTCTCTCG CTCTCAACCC 
    CCCCAAAGTA AAATCCATTC TAATAAAATT AACAGTGCAA TCTCAGCTTC TTTATCTGAT 
    AATGGAAGCG CGCCAAAGTC ATTTGATTAT GATTTGGTCA TTATCGGTGC TGGTGTTGGC 
    GGCCATGGTG CCGCTCTTCA CGCTGTTGAG AAGGGTTTGA AAACTGCTAT TATTGAAGGA 
    GATGTGATAG GGGGGACATG TGTGAACAGA GGCTGTGTTC CTTCAAAGGC TCTTTTAGCT 
    GTAAGTGGCC GGATGCGTGA ACTACAGAAC GAGCATCACA TGAAAGCTTT GGGTTTGCAG 
    GTTGCAGCTG CTGGATATGA TAGACAAGGA GTGGCAGATC ATGCCAATAA TCTTGCTACA 
    AAAATTCGTA ATAATTTAAC GAACTCGATG AAGGCCTTGG GTGTGGATAT ATTGACTGGT 
    GTTGGCTCAA TTATGGGCCC ACACAAGGTG CGATATGGGA AACTTGATTC TCCAGGCGAC 
    ATAGTGACTG CTAAAGATAT AATCATTGCT ACTGGTTCTG TCCCTTTTGT ACCCAAGGGC 
    ATCGAAGTTG ATGGGAAGAC TGTAATCACA AGTGACCATG CACTCAAACT GGAGTCTGTT 
    CCCGATTGGA TAGCAATTGT AGGAAGTGGT TATATTGGTC TAGAATTCAG TGATGTGTAT 
    ACTGCCCTTG GAAGTGAGGT CACCTTTATT GAAGCCCTTG ATCAGCTCAT GCCTGGATTT 
    GATCCTGAGA TTGGAAAGTT GGCTCAAAGG GTCCTAATTA ATCCACGCAA AATCGACTAT 
    CATACTGGAG TATTTGCAAC CAAGATCACT CCAGCTAAGA ATGGGAAACC AGTTACCATT 
    GAGCTCATTG ACGCCAAGAC CAAGGAACCC AAAGATACTC TAGAGGTAGA TGCAGCATTA 
    ATTGCAACTG GAAGGGCTCC TTTCACAGAT GGTCTTGGCT TGGACAGTGT CCATGTAGAA 
    AGGAAACGTG GTTTTGTTCC TGTTGATGAG AGGATGCGTG TCCTAGATTT TAAGGGGGAT 
    CCGGTTCCTC ACTTGTATTG CATTGGTGAT GCTAATGGTA AAATGATGCT TGCTCATGCG 
    GCCAGTGCAC AAGGAATTTC AGTGATTGAA CAAATCACTG GAAGGGATCA CGTGCTAAAT 
    CATTTGAGCA TTCCGGCAGC TTGTTTCACT CACCCTGAAA TCAGTATGGT TGGATTGACA 
    GAGCCTCAAG CAAGGGAGAA AGCTGAAAAG GAGGGTTTTG AAGTAAGTGT TGCCAAGACA 
    AGTTTCAAGG CCAACACAAA GGCCTTGGCA GAAAATGAAG GAGAGGGGCT AGCTAAGTTG 
    ATATATAGAC CCGACAATGG AGAGATACTT GGCGTGCATA TTTTTGGGTT GCATGCCGCA 
    GATCTCATCC ATGAAGCATC CAATGCTATA GCTTTGGGCA CGCGTATTCA GGACATAAAA 
    TTTGCAGTTC ATGCACACCC AACACTATCA GAAGTTATTG ACGAACTTTT CAAATCAGCA 
    AAGGTTAAAG CTCATGTTTC AGGCCCAGTA AGTGAACCAG TTGCTGTCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7489415 ( XM_024611329.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024467097.1 Populus trichocarpa dihydrolipoyl dehydrogenase 2, chloroplastic (LOC7489415), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa23764
    Clone ID Related Accession (Same CDS sequence) XM_002315988.2 , XM_002315988.3 , XM_024611329.1
    Accession Version XM_024611329.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1731bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product dihydrolipoyl dehydrogenase 2, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCATTCCT CGGCAACTCT CTCGCTCTCT CAGCCCGCAG CAGCCTCAAC CATTCCCAAA 
    TCAAACTACA CGGTTAATCA CTCCCTCCCT TTCTCCCCTT CTAAGCCCAT AAATCTCCGT 
    TTCTGCGGTC TTAGAAGAGA AGCATTTTCA GGCTTCTCTT CTCTCTCTCG CTCTCAACCC 
    CCCCAAAGTA AAATCCATTC TAATAAAATT AACAGTGCAA TCTCAGCTTC TTTATCTGAT 
    AATGGAAGCG CGCCAAAGTC ATTTGATTAT GATTTGGTCA TTATCGGTGC TGGTGTTGGC 
    GGCCATGGTG CCGCTCTTCA CGCTGTTGAG AAGGGTTTGA AAACTGCTAT TATTGAAGGA 
    GATGTGATAG GGGGGACATG TGTGAACAGA GGCTGTGTTC CTTCAAAGGC TCTTTTAGCT 
    GTAAGTGGCC GGATGCGTGA ACTACAGAAC GAGCATCACA TGAAAGCTTT GGGTTTGCAG 
    GTTGCAGCTG CTGGATATGA TAGACAAGGA GTGGCAGATC ATGCCAATAA TCTTGCTACA 
    AAAATTCGTA ATAATTTAAC GAACTCGATG AAGGCCTTGG GTGTGGATAT ATTGACTGGT 
    GTTGGCTCAA TTATGGGCCC ACACAAGGTG CGATATGGGA AACTTGATTC TCCAGGCGAC 
    ATAGTGACTG CTAAAGATAT AATCATTGCT ACTGGTTCTG TCCCTTTTGT ACCCAAGGGC 
    ATCGAAGTTG ATGGGAAGAC TGTAATCACA AGTGACCATG CACTCAAACT GGAGTCTGTT 
    CCCGATTGGA TAGCAATTGT AGGAAGTGGT TATATTGGTC TAGAATTCAG TGATGTGTAT 
    ACTGCCCTTG GAAGTGAGGT CACCTTTATT GAAGCCCTTG ATCAGCTCAT GCCTGGATTT 
    GATCCTGAGA TTGGAAAGTT GGCTCAAAGG GTCCTAATTA ATCCACGCAA AATCGACTAT 
    CATACTGGAG TATTTGCAAC CAAGATCACT CCAGCTAAGA ATGGGAAACC AGTTACCATT 
    GAGCTCATTG ACGCCAAGAC CAAGGAACCC AAAGATACTC TAGAGGTAGA TGCAGCATTA 
    ATTGCAACTG GAAGGGCTCC TTTCACAGAT GGTCTTGGCT TGGACAGTGT CCATGTAGAA 
    AGGAAACGTG GTTTTGTTCC TGTTGATGAG AGGATGCGTG TCCTAGATTT TAAGGGGGAT 
    CCGGTTCCTC ACTTGTATTG CATTGGTGAT GCTAATGGTA AAATGATGCT TGCTCATGCG 
    GCCAGTGCAC AAGGAATTTC AGTGATTGAA CAAATCACTG GAAGGGATCA CGTGCTAAAT 
    CATTTGAGCA TTCCGGCAGC TTGTTTCACT CACCCTGAAA TCAGTATGGT TGGATTGACA 
    GAGCCTCAAG CAAGGGAGAA AGCTGAAAAG GAGGGTTTTG AAGTAAGTGT TGCCAAGACA 
    AGTTTCAAGG CCAACACAAA GGCCTTGGCA GAAAATGAAG GAGAGGGGCT AGCTAAGTTG 
    ATATATAGAC CCGACAATGG AGAGATACTT GGCGTGCATA TTTTTGGGTT GCATGCCGCA 
    GATCTCATCC ATGAAGCATC CAATGCTATA GCTTTGGGCA CGCGTATTCA GGACATAAAA 
    TTTGCAGTTC ATGCACACCC AACACTATCA GAAGTTATTG ACGAACTTTT CAAATCAGCA 
    AAGGTTAAAG CTCATGTTTC AGGCCCAGTA AGTGAACCAG TTGCTGTCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024467097.1
    CDS186..1916
    Translation

    Target ORF information:

    RefSeq Version XM_024611329.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa dihydrolipoyl dehydrogenase 2, chloroplastic (LOC7489415), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024611329.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCATTCCT CGGCAACTCT CTCGCTCTCT CAGCCCGCAG CAGCCTCAAC CATTCCCAAA 
    TCAAACTACA CGGTTAATCA CTCCCTCCCT TTCTCCCCTT CTAAGCCCAT AAATCTCCGT 
    TTCTGCGGTC TTAGAAGAGA AGCATTTTCA GGCTTCTCTT CTCTCTCTCG CTCTCAACCC 
    CCCCAAAGTA AAATCCATTC TAATAAAATT AACAGTGCAA TCTCAGCTTC TTTATCTGAT 
    AATGGAAGCG CGCCAAAGTC ATTTGATTAT GATTTGGTCA TTATCGGTGC TGGTGTTGGC 
    GGCCATGGTG CCGCTCTTCA CGCTGTTGAG AAGGGTTTGA AAACTGCTAT TATTGAAGGA 
    GATGTGATAG GGGGGACATG TGTGAACAGA GGCTGTGTTC CTTCAAAGGC TCTTTTAGCT 
    GTAAGTGGCC GGATGCGTGA ACTACAGAAC GAGCATCACA TGAAAGCTTT GGGTTTGCAG 
    GTTGCAGCTG CTGGATATGA TAGACAAGGA GTGGCAGATC ATGCCAATAA TCTTGCTACA 
    AAAATTCGTA ATAATTTAAC GAACTCGATG AAGGCCTTGG GTGTGGATAT ATTGACTGGT 
    GTTGGCTCAA TTATGGGCCC ACACAAGGTG CGATATGGGA AACTTGATTC TCCAGGCGAC 
    ATAGTGACTG CTAAAGATAT AATCATTGCT ACTGGTTCTG TCCCTTTTGT ACCCAAGGGC 
    ATCGAAGTTG ATGGGAAGAC TGTAATCACA AGTGACCATG CACTCAAACT GGAGTCTGTT 
    CCCGATTGGA TAGCAATTGT AGGAAGTGGT TATATTGGTC TAGAATTCAG TGATGTGTAT 
    ACTGCCCTTG GAAGTGAGGT CACCTTTATT GAAGCCCTTG ATCAGCTCAT GCCTGGATTT 
    GATCCTGAGA TTGGAAAGTT GGCTCAAAGG GTCCTAATTA ATCCACGCAA AATCGACTAT 
    CATACTGGAG TATTTGCAAC CAAGATCACT CCAGCTAAGA ATGGGAAACC AGTTACCATT 
    GAGCTCATTG ACGCCAAGAC CAAGGAACCC AAAGATACTC TAGAGGTAGA TGCAGCATTA 
    ATTGCAACTG GAAGGGCTCC TTTCACAGAT GGTCTTGGCT TGGACAGTGT CCATGTAGAA 
    AGGAAACGTG GTTTTGTTCC TGTTGATGAG AGGATGCGTG TCCTAGATTT TAAGGGGGAT 
    CCGGTTCCTC ACTTGTATTG CATTGGTGAT GCTAATGGTA AAATGATGCT TGCTCATGCG 
    GCCAGTGCAC AAGGAATTTC AGTGATTGAA CAAATCACTG GAAGGGATCA CGTGCTAAAT 
    CATTTGAGCA TTCCGGCAGC TTGTTTCACT CACCCTGAAA TCAGTATGGT TGGATTGACA 
    GAGCCTCAAG CAAGGGAGAA AGCTGAAAAG GAGGGTTTTG AAGTAAGTGT TGCCAAGACA 
    AGTTTCAAGG CCAACACAAA GGCCTTGGCA GAAAATGAAG GAGAGGGGCT AGCTAAGTTG 
    ATATATAGAC CCGACAATGG AGAGATACTT GGCGTGCATA TTTTTGGGTT GCATGCCGCA 
    GATCTCATCC ATGAAGCATC CAATGCTATA GCTTTGGGCA CGCGTATTCA GGACATAAAA 
    TTTGCAGTTC ATGCACACCC AACACTATCA GAAGTTATTG ACGAACTTTT CAAATCAGCA 
    AAGGTTAAAG CTCATGTTTC AGGCCCAGTA AGTGAACCAG TTGCTGTCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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