ORF » Species Summary » Populus trichocarpa » POPTR_0012s05090g cDNA ORF clone

POPTR_0012s05090g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0012s05090g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0012s05090g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa27061 XM_002318504.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0012s05090g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa441026 XM_024582770.1
Latest version!		 Populus trichocarpa LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 (LOC7486759), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0012s05090g ( XM_002318504.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002318540.2 Populus trichocarpa hypothetical protein (POPTR_0012s05090g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa27061
    Clone ID Related Accession (Same CDS sequence) XM_002318504.2
    Accession Version XM_002318504.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1110bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008478). On Dec 16, 2013 this sequence version replaced XM_002318504.1. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGTCCATAG CCTTCTTCTT CTGGTACCGC CACAAGAAAA GGCAATATGT ATCCTTTGTC 
    TCTCGAAGCA TTAAATCAGT TCCATCTTCC AAGGCATATA TGGAGAAGCG AGGTAGCTAC 
    AATGGCGTCC ATCTCTTCTC TTATGATGAA CTTGAAGAGG CTACTAACAA TTTTGATGAG 
    ACTAGAGAGC TTGGAGATGG AGGCTTTGGG ACAGTATATT ACGGCAAACT TCCAGATGGC 
    CGCGAGGTTG CAGTCAAGCG CTTGTATGAG AACAATTACA AGAGACTTGA GCAGTTTTTG 
    AATGAAGTTG ACATCCTAAC TCGCCTGCGC CATAAAAATC TTGTTCTGCT ATATGGATGC 
    ACCTCTCGGC ATAGCCGTGA ACTCCTACTA GTATACGAGT ACATTCCCAA TGGTACACTT 
    GCTGATCATC TTCATGGTCA AAGAGCAAAG CCTGGTGCAT TGACTTGTCG TACTCGGATG 
    AACATTGCTG TAGAGACTGC AAGTGCACTG GCATATCTTC ATGCTTCTGA TATTGTGCAC 
    CGTGATGTGA AAACCACCAA TATTCTCCTT GGTAACGATT TCTGCGTAAA AGTTGCAGAT 
    TTTGGGCTGT CTCGACTATT TCCATTAGAC GTCACCCATG TTTCAACTGC TCCACAAGGG 
    ACTCCTGGTT ATGTTGATCC AGACTATCAT CAATGCTACC AGCTGACTGA TAAGAGTGAT 
    GTCTATAGCT TCGGGGTGGT CTTGATTGAG CTTATATCAT CAATGCCTGC CGTTGATATC 
    TCTAGACACC GGCACGAGAT TAATTTGTCT AACATGGCAA TCAATAAAAT CCAAAGCAAT 
    GCATTAAATG AACTTGTTGA CCCAAGTCTT GGGTTTGAAT CAGATTATGC AGCAAGAAAA 
    ATGATTTCTG CGGTGGCTGA GTTGGCTTTT CAATGTCTAC AATCTGCAAG GGAGTTGAGA 
    CCCTCTATGG AAAAAGTCGT AGAGATTCTG AAAGATATAC AAAGTAGAGA CTACACTGCG 
    GAAAGGGCAG AGGAGATAGA TATTCCGTCA GATGATGTTG TGCTGTTGAA GAGTGGCCCG 
    ATACCACTTG ACTGCACGCT GTCACTGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002318540.2
    CDS151..1260
    Translation

    Target ORF information:

    RefSeq Version XM_002318504.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0012s05090g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002318504.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGTCCATAG CCTTCTTCTT CTGGTACCGC CACAAGAAAA GGCAATATGT ATCCTTTGTC 
    TCTCGAAGCA TTAAATCAGT TCCATCTTCC AAGGCATATA TGGAGAAGCG AGGTAGCTAC 
    AATGGCGTCC ATCTCTTCTC TTATGATGAA CTTGAAGAGG CTACTAACAA TTTTGATGAG 
    ACTAGAGAGC TTGGAGATGG AGGCTTTGGG ACAGTATATT ACGGCAAACT TCCAGATGGC 
    CGCGAGGTTG CAGTCAAGCG CTTGTATGAG AACAATTACA AGAGACTTGA GCAGTTTTTG 
    AATGAAGTTG ACATCCTAAC TCGCCTGCGC CATAAAAATC TTGTTCTGCT ATATGGATGC 
    ACCTCTCGGC ATAGCCGTGA ACTCCTACTA GTATACGAGT ACATTCCCAA TGGTACACTT 
    GCTGATCATC TTCATGGTCA AAGAGCAAAG CCTGGTGCAT TGACTTGTCG TACTCGGATG 
    AACATTGCTG TAGAGACTGC AAGTGCACTG GCATATCTTC ATGCTTCTGA TATTGTGCAC 
    CGTGATGTGA AAACCACCAA TATTCTCCTT GGTAACGATT TCTGCGTAAA AGTTGCAGAT 
    TTTGGGCTGT CTCGACTATT TCCATTAGAC GTCACCCATG TTTCAACTGC TCCACAAGGG 
    ACTCCTGGTT ATGTTGATCC AGACTATCAT CAATGCTACC AGCTGACTGA TAAGAGTGAT 
    GTCTATAGCT TCGGGGTGGT CTTGATTGAG CTTATATCAT CAATGCCTGC CGTTGATATC 
    TCTAGACACC GGCACGAGAT TAATTTGTCT AACATGGCAA TCAATAAAAT CCAAAGCAAT 
    GCATTAAATG AACTTGTTGA CCCAAGTCTT GGGTTTGAAT CAGATTATGC AGCAAGAAAA 
    ATGATTTCTG CGGTGGCTGA GTTGGCTTTT CAATGTCTAC AATCTGCAAG GGAGTTGAGA 
    CCCTCTATGG AAAAAGTCGT AGAGATTCTG AAAGATATAC AAAGTAGAGA CTACACTGCG 
    GAAAGGGCAG AGGAGATAGA TATTCCGTCA GATGATGTTG TGCTGTTGAA GAGTGGCCCG 
    ATACCACTTG ACTGCACGCT GTCACTGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0012s05090g ( XM_024582770.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024438538.1 Populus trichocarpa LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 (LOC7486759), mRNA.
    Price & Availability↑
    CloneID OPa441026
    Clone ID Related Accession (Same CDS sequence) XM_024582770.1
    Accession Version XM_024582770.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2112bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037296.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 7% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    ATGGTTGCCC ATATTTTGTT CTTACTCTAT CAACACCACC CCATCATCAC CATCTTCCTT 
    GTCCTAATCC TTGCATCAAC ATCTTATGGT GAGGATGATA ATAAAGATTA CAGAGACTGC 
    AAAAAGCATT TTAATTGTGG AGTCTTATCA AACCTTTCTT ATCCTTTCTG GGGAGGTGAT 
    CGACCTGAAG TTTGTGGACA TAAAGGGTTC CAGCTCAAGT GTGAAGAAGG CCAGCTCCCT 
    ATAATACCAA GTGACAAACT AGAATTCCGC CTATCTCGTT TAAATCAATC TTCCAGGTTG 
    ATGACTCTGC AGCTAGTGAA TTCCAAAGAT TACATTTGTC CTACTCAAAA TTTAGCCAAT 
    TCAAGTACTG AGAGTGACAT CCATGTCTTC GGTTATGACC TCAACCTTCA AAACCTGAAC 
    TTACTTTACA ACTGCACGGT CCCGAACTCG ACGCTGGTGC AAAATAGAAT TTCGAGTTCG 
    GCTTGTAGAA AATATAGTGG CAGTTCATTC TATGGAAGTG ATGATATCTT AGAGAGCAGT 
    AGTGGGCTAC ACCAAACGCA ATGTAGCGTA AGGATCAAAA TCCCCATTCC AGTTGAGACT 
    TTTCGTCGAC TAACGGGTAA CAGATCAGAA TTGGAGCAAG TTTTAAGAGA AGAGTTTAAC 
    GTGTCGTACA AGTATGATCA AGGTCCTTCA ATTTGCGATG CATGCATGGC TTCGAAAGGA 
    ATATGTGGAA CCAACTTGAC TGATCCCAAT AGAGAGTTCT TGTGCCTTTG CCGTGACCAA 
    CCTTTTCCTT TTGTGTGCAA AGGAAATAAA GATGTCATGA ATGTGGGTCG GAAGGTTCGT 
    ATGGCTCTTG GGGCATCTCT TGGTACGGTA ATCATAATGT CCATAGCCTT CTTCTTCTGG 
    TACCGCCACA AGAAAAGGCA ATATGTATCC TTTGTCTCTC GAAGCATTAA ATCAGTTCCA 
    TCTTCCAAGG CATATATGGA GAAGCGAGGT AGCTACAATG GCGTCCATCT CTTCTCTTAT 
    GATGAACTTG AAGAGGCTAC TAACAATTTT GATGAGACTA GAGAGCTTGG AGATGGAGGC 
    TTTGGGACAG TATATTACGG CAAACTTCCA GATGGCAGCG AGGTTGCAGT CAAGCGCTTG 
    TATGAGAACA ATTACAAGAG ACTTGAGCAG TTTTTGAATG AAGTTGACAT CCTAACTCGC 
    CTGCGCCATA AAAATCTTGT TCTGCTATAT GGATGCACCT CTCGGCATAG CCGTGAACTC 
    CTACTAGTAT ACGAGTACAT TCCCAATGGT ACACTTGCTG ATCATCTTCA TGGTCAAAGA 
    GCAAAGCCTG GTGCATTGAC TTGTCCTACT CGGATGAACA TTGCTGTAGA GACCGCAAGT 
    GCATTGGCAT ATCTTCATGC TTCTGATATT GTGCACCGTG ATGTGAAAAC CACCAATATT 
    CTCCTTGGTA ACGATTTCTG CGTAAAAGTT GCAGATTTTG GGCTGTCTCG ACTATTTCCA 
    TTAGACGTCA CCCATGTTTC AACTGCTCCA CAAGGGACTC CTGGTTATGT TGATCCAGAC 
    TATCATCAAT GCTACCAGCT GACTGATAAG AGTGATGTCT ATAGCTTCGG GGTGGTCTTG 
    ATTGAGCTTA TATCATCAAT GCCTGCCGTT GATATCTCTA GACACCGGCA CGAGATTAAT 
    TTGTCTAACA TGGCAATCAA TAAAATCCAA AGCAATGCAT TAAATGAACT TGTTGACCCA 
    AGTCTTGGGT TTGAATCAGA TTATGCAGCA AGAAAAATGA TTTCTGCGGT GGCTGAGTTG 
    GCTTTTCAAT GTCTACAATC TGCAAGGGAG TTGAGACCCT CTATGGAAAA AGTCGTAGAG 
    ATTCTGAAAG ATATACAAAG TAGAGACTAC ACTGCGGAAA GGGCAGAGGA GATAGATATT 
    CCGTCAGATG ATGTTGTGCT GTTGAAGAGT GGCCCGATAC CACGGTACTT TCCGTCGGTA 
    AAATCGCCTG ACGTCACCAT TCCGTTGCGT ATTTCCAGAC GAACTGTATA TGTCGTCGGT 
    GAAGTCGACG TACAACTGAT TCATAGTGGA TGCAATCTAT TAGAATTGCT TGCTTCGACA 
    GGGCAGCCGT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024438538.1
    CDS149..2260
    Translation

    Target ORF information:

    RefSeq Version XM_024582770.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 (LOC7486759), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024582770.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    ATGGTTGCCC ATATTTTGTT CTTACTCTAT CAACACCACC CCATCATCAC CATCTTCCTT 
    GTCCTAATCC TTGCATCAAC ATCTTATGGT GAGGATGATA ATAAAGATTA CAGAGACTGC 
    AAAAAGCATT TTAATTGTGG AGTCTTATCA AACCTTTCTT ATCCTTTCTG GGGAGGTGAT 
    CGACCTGAAG TTTGTGGACA TAAAGGGTTC CAGCTCAAGT GTGAAGAAGG CCAGCTCCCT 
    ATAATACCAA GTGACAAACT AGAATTCCGC CTATCTCGTT TAAATCAATC TTCCAGGTTG 
    ATGACTCTGC AGCTAGTGAA TTCCAAAGAT TACATTTGTC CTACTCAAAA TTTAGCCAAT 
    TCAAGTACTG AGAGTGACAT CCATGTCTTC GGTTATGACC TCAACCTTCA AAACCTGAAC 
    TTACTTTACA ACTGCACGGT CCCGAACTCG ACGCTGGTGC AAAATAGAAT TTCGAGTTCG 
    GCTTGTAGAA AATATAGTGG CAGTTCATTC TATGGAAGTG ATGATATCTT AGAGAGCAGT 
    AGTGGGCTAC ACCAAACGCA ATGTAGCGTA AGGATCAAAA TCCCCATTCC AGTTGAGACT 
    TTTCGTCGAC TAACGGGTAA CAGATCAGAA TTGGAGCAAG TTTTAAGAGA AGAGTTTAAC 
    GTGTCGTACA AGTATGATCA AGGTCCTTCA ATTTGCGATG CATGCATGGC TTCGAAAGGA 
    ATATGTGGAA CCAACTTGAC TGATCCCAAT AGAGAGTTCT TGTGCCTTTG CCGTGACCAA 
    CCTTTTCCTT TTGTGTGCAA AGGAAATAAA GATGTCATGA ATGTGGGTCG GAAGGTTCGT 
    ATGGCTCTTG GGGCATCTCT TGGTACGGTA ATCATAATGT CCATAGCCTT CTTCTTCTGG 
    TACCGCCACA AGAAAAGGCA ATATGTATCC TTTGTCTCTC GAAGCATTAA ATCAGTTCCA 
    TCTTCCAAGG CATATATGGA GAAGCGAGGT AGCTACAATG GCGTCCATCT CTTCTCTTAT 
    GATGAACTTG AAGAGGCTAC TAACAATTTT GATGAGACTA GAGAGCTTGG AGATGGAGGC 
    TTTGGGACAG TATATTACGG CAAACTTCCA GATGGCAGCG AGGTTGCAGT CAAGCGCTTG 
    TATGAGAACA ATTACAAGAG ACTTGAGCAG TTTTTGAATG AAGTTGACAT CCTAACTCGC 
    CTGCGCCATA AAAATCTTGT TCTGCTATAT GGATGCACCT CTCGGCATAG CCGTGAACTC 
    CTACTAGTAT ACGAGTACAT TCCCAATGGT ACACTTGCTG ATCATCTTCA TGGTCAAAGA 
    GCAAAGCCTG GTGCATTGAC TTGTCCTACT CGGATGAACA TTGCTGTAGA GACCGCAAGT 
    GCATTGGCAT ATCTTCATGC TTCTGATATT GTGCACCGTG ATGTGAAAAC CACCAATATT 
    CTCCTTGGTA ACGATTTCTG CGTAAAAGTT GCAGATTTTG GGCTGTCTCG ACTATTTCCA 
    TTAGACGTCA CCCATGTTTC AACTGCTCCA CAAGGGACTC CTGGTTATGT TGATCCAGAC 
    TATCATCAAT GCTACCAGCT GACTGATAAG AGTGATGTCT ATAGCTTCGG GGTGGTCTTG 
    ATTGAGCTTA TATCATCAAT GCCTGCCGTT GATATCTCTA GACACCGGCA CGAGATTAAT 
    TTGTCTAACA TGGCAATCAA TAAAATCCAA AGCAATGCAT TAAATGAACT TGTTGACCCA 
    AGTCTTGGGT TTGAATCAGA TTATGCAGCA AGAAAAATGA TTTCTGCGGT GGCTGAGTTG 
    GCTTTTCAAT GTCTACAATC TGCAAGGGAG TTGAGACCCT CTATGGAAAA AGTCGTAGAG 
    ATTCTGAAAG ATATACAAAG TAGAGACTAC ACTGCGGAAA GGGCAGAGGA GATAGATATT 
    CCGTCAGATG ATGTTGTGCT GTTGAAGAGT GGCCCGATAC CACGGTACTT TCCGTCGGTA 
    AAATCGCCTG ACGTCACCAT TCCGTTGCGT ATTTCCAGAC GAACTGTATA TGTCGTCGGT 
    GAAGTCGACG TACAACTGAT TCATAGTGGA TGCAATCTAT TAGAATTGCT TGCTTCGACA 
    GGGCAGCCGT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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