ORF » Species Summary » Populus trichocarpa » LOC7477625 cDNA ORF clone

LOC7477625 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7477625 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7477625 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa12291 XM_002307632.3
Latest version!		 Populus trichocarpa glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (LOC7477625), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
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OPa12291 XM_002307632.2 Populus trichocarpa hypothetical protein (POPTR_0005s25130g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7477625 ( XM_002307632.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002307668.2 Populus trichocarpa hypothetical protein (POPTR_0005s25130g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa12291
    Clone ID Related Accession (Same CDS sequence) XM_002307632.2 , XM_002307632.3
    Accession Version XM_002307632.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1587bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). On Dec 16, 2013 this sequence version replaced XM_002307632.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATTCTT TCTGTGGAGC ATCGAAGGCA AGTGCTGGTG CCAATGTGGT TAATGTTAAC 
    AAGGGAAGTA TTAGAAATGA AGGGACTCAC TTTTGGGGTG AGAGGATTAA GAAGAACCCG 
    AAGAGCAGGG ATTTGAGTGC CCTGTTGTGG AAAAATCTGA GAAGCGGTGT GAAAAAGGCT 
    AAGCCTGGAG TTGCCTACTC TGTTCTTACA TCAGATGTTA ACAAAGAAAT TGTGACGTTT 
    GAAGCACCTG TGTTTGAGAC TCAACAAGCA GACCCAGGTA ATGTAGCTTC GATCATATTA 
    GGTGGAGGTG CTGGGACACG CCTCTTTCCT CTTACCAGCA AAAGAGCCAA GCCCGCGGTT 
    CCAATTGGAG GCTGTTACAG GCTGATTGAT ATTCCTATGA GTAATTGCAT CAACAGTGGG 
    ATAAAGAAGA TTTTCATCCT AACACAGTTT AACTCCTTCT CGCTCAATCG GCATATAGCT 
    CGCACGTATA ACCTTGGCAA TGGTGTTAGT TTTGGAGATG GATTTGTGGA GGTTTTGGCA 
    GCTACTCAAA CTCCAGGGGA AACAGGAAAG AAGTGGTTTC AAGGAACCGC AGATGCTGTG 
    AGGCAGTTTA TATGGGTGTT TGAGGATGCA AGGAACAAGA ACGTGGAGCA TGTATTGATC 
    TTGTCTGGTG ATCATCTTTA TCGAATGAAC TACATGGAAT TTGTCCAGAA GCATATCGAC 
    ACAAATGCAG ATGTTACAGT TTCCTGTGTG CCCATGGATG ACAGTCGTGC ATCAGATTAT 
    GGACTGATGA AGATTGACAA CACTGGACGT ATCGTTCAAT TTGCCGAGAA ACCCAAGGGC 
    CCTGATCTGA AAGCAATGCA AGTTGATACC ACTCTTCTTG GACTCTCCAG ACAAGAAGCT 
    ATGCAATTTC CCTATATTGC TTCAATGGGC GTTTATGTGT TTAGAACTGA TGTCCTGCTG 
    AAGCTTCTGA GGTGGAGCTA TCCCTCATGC AATGACTTCG GTTCCGAAAT CATTCCATCT 
    GCTGTGAGGG ATCATAATGT CCAGGCTTAC TTATTCAATG ACTACTGGGA GGACATTGGA 
    ACAGTAAAGT CATTTTTTGA TGCCAATTTG GGCCTCACGA AGCAGCCACC GAAGTTTGAA 
    TTTTATGATC CGCAGACACC TTTCTTCACC TCTCCTAGAT TCTTGCCGCC AACTAAAGTT 
    GATAGATGCA GGATTGTTGA TGCAATAATC TCACATGGCT GCTTTCTACG AGAATGTAGT 
    GTGCAACATT CTATTGTAGG AGTTCGCTCA CGTTTAGAGA GTGGCGTTGA ACTTACAGAT 
    ACTATGATGA TGGGTGCTGA CTACTATCAA ACTGAATCTG AAATTGCCTC TCTGCTAGCA 
    GAAGGAAAGG TCCCAATTGG TGTTGGTCAA AATACCAAAA TCAGGAACTG TATTATCGAT 
    AAGAATGCCA AGATAGGAAA AGATGTGATC ATCACAAATG CTGATGGTGT TCAAGAAGCA 
    GACAGGCCAA GTGAAGGGTT TTACATTAGA TCAGGGATCA CAGCCGTACT GAAGAATGCA 
    GCAATCAAAG ATGGGACCCT TATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307668.2
    CDS492..2078
    Translation

    Target ORF information:

    RefSeq Version XM_002307632.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0005s25130g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307632.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATTCTT TCTGTGGAGC ATCGAAGGCA AGTGCTGGTG CCAATGTGGT TAATGTTAAC 
    AAGGGAAGTA TTAGAAATGA AGGGACTCAC TTTTGGGGTG AGAGGATTAA GAAGAACCCG 
    AAGAGCAGGG ATTTGAGTGC CCTGTTGTGG AAAAATCTGA GAAGCGGTGT GAAAAAGGCT 
    AAGCCTGGAG TTGCCTACTC TGTTCTTACA TCAGATGTTA ACAAAGAAAT TGTGACGTTT 
    GAAGCACCTG TGTTTGAGAC TCAACAAGCA GACCCAGGTA ATGTAGCTTC GATCATATTA 
    GGTGGAGGTG CTGGGACACG CCTCTTTCCT CTTACCAGCA AAAGAGCCAA GCCCGCGGTT 
    CCAATTGGAG GCTGTTACAG GCTGATTGAT ATTCCTATGA GTAATTGCAT CAACAGTGGG 
    ATAAAGAAGA TTTTCATCCT AACACAGTTT AACTCCTTCT CGCTCAATCG GCATATAGCT 
    CGCACGTATA ACCTTGGCAA TGGTGTTAGT TTTGGAGATG GATTTGTGGA GGTTTTGGCA 
    GCTACTCAAA CTCCAGGGGA AACAGGAAAG AAGTGGTTTC AAGGAACCGC AGATGCTGTG 
    AGGCAGTTTA TATGGGTGTT TGAGGATGCA AGGAACAAGA ACGTGGAGCA TGTATTGATC 
    TTGTCTGGTG ATCATCTTTA TCGAATGAAC TACATGGAAT TTGTCCAGAA GCATATCGAC 
    ACAAATGCAG ATGTTACAGT TTCCTGTGTG CCCATGGATG ACAGTCGTGC ATCAGATTAT 
    GGACTGATGA AGATTGACAA CACTGGACGT ATCGTTCAAT TTGCCGAGAA ACCCAAGGGC 
    CCTGATCTGA AAGCAATGCA AGTTGATACC ACTCTTCTTG GACTCTCCAG ACAAGAAGCT 
    ATGCAATTTC CCTATATTGC TTCAATGGGC GTTTATGTGT TTAGAACTGA TGTCCTGCTG 
    AAGCTTCTGA GGTGGAGCTA TCCCTCATGC AATGACTTCG GTTCCGAAAT CATTCCATCT 
    GCTGTGAGGG ATCATAATGT CCAGGCTTAC TTATTCAATG ACTACTGGGA GGACATTGGA 
    ACAGTAAAGT CATTTTTTGA TGCCAATTTG GGCCTCACGA AGCAGCCACC GAAGTTTGAA 
    TTTTATGATC CGCAGACACC TTTCTTCACC TCTCCTAGAT TCTTGCCGCC AACTAAAGTT 
    GATAGATGCA GGATTGTTGA TGCAATAATC TCACATGGCT GCTTTCTACG AGAATGTAGT 
    GTGCAACATT CTATTGTAGG AGTTCGCTCA CGTTTAGAGA GTGGCGTTGA ACTTACAGAT 
    ACTATGATGA TGGGTGCTGA CTACTATCAA ACTGAATCTG AAATTGCCTC TCTGCTAGCA 
    GAAGGAAAGG TCCCAATTGG TGTTGGTCAA AATACCAAAA TCAGGAACTG TATTATCGAT 
    AAGAATGCCA AGATAGGAAA AGATGTGATC ATCACAAATG CTGATGGTGT TCAAGAAGCA 
    GACAGGCCAA GTGAAGGGTT TTACATTAGA TCAGGGATCA CAGCCGTACT GAAGAATGCA 
    GCAATCAAAG ATGGGACCCT TATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7477625 ( XM_002307632.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002307668.2 Populus trichocarpa glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (LOC7477625), mRNA.
    Price & Availability↑
    CloneID OPa12291
    Clone ID Related Accession (Same CDS sequence) XM_002307632.2 , XM_002307632.3
    Accession Version XM_002307632.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1587bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002307632.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATTCTT TCTGTGGAGC ATCGAAGGCA AGTGCTGGTG CCAATGTGGT TAATGTTAAC 
    AAGGGAAGTA TTAGAAATGA AGGGACTCAC TTTTGGGGTG AGAGGATTAA GAAGAACCCG 
    AAGAGCAGGG ATTTGAGTGC CCTGTTGTGG AAAAATCTGA GAAGCGGTGT GAAAAAGGCT 
    AAGCCTGGAG TTGCCTACTC TGTTCTTACA TCAGATGTTA ACAAAGAAAT TGTGACGTTT 
    GAAGCACCTG TGTTTGAGAC TCAACAAGCA GACCCAGGTA ATGTAGCTTC GATCATATTA 
    GGTGGAGGTG CTGGGACACG CCTCTTTCCT CTTACCAGCA AAAGAGCCAA GCCCGCGGTT 
    CCAATTGGAG GCTGTTACAG GCTGATTGAT ATTCCTATGA GTAATTGCAT CAACAGTGGG 
    ATAAAGAAGA TTTTCATCCT AACACAGTTT AACTCCTTCT CGCTCAATCG GCATATAGCT 
    CGCACGTATA ACCTTGGCAA TGGTGTTAGT TTTGGAGATG GATTTGTGGA GGTTTTGGCA 
    GCTACTCAAA CTCCAGGGGA AACAGGAAAG AAGTGGTTTC AAGGAACCGC AGATGCTGTG 
    AGGCAGTTTA TATGGGTGTT TGAGGATGCA AGGAACAAGA ACGTGGAGCA TGTATTGATC 
    TTGTCTGGTG ATCATCTTTA TCGAATGAAC TACATGGAAT TTGTCCAGAA GCATATCGAC 
    ACAAATGCAG ATGTTACAGT TTCCTGTGTG CCCATGGATG ACAGTCGTGC ATCAGATTAT 
    GGACTGATGA AGATTGACAA CACTGGACGT ATCGTTCAAT TTGCCGAGAA ACCCAAGGGC 
    CCTGATCTGA AAGCAATGCA AGTTGATACC ACTCTTCTTG GACTCTCCAG ACAAGAAGCT 
    ATGCAATTTC CCTATATTGC TTCAATGGGC GTTTATGTGT TTAGAACTGA TGTCCTGCTG 
    AAGCTTCTGA GGTGGAGCTA TCCCTCATGC AATGACTTCG GTTCCGAAAT CATTCCATCT 
    GCTGTGAGGG ATCATAATGT CCAGGCTTAC TTATTCAATG ACTACTGGGA GGACATTGGA 
    ACAGTAAAGT CATTTTTTGA TGCCAATTTG GGCCTCACGA AGCAGCCACC GAAGTTTGAA 
    TTTTATGATC CGCAGACACC TTTCTTCACC TCTCCTAGAT TCTTGCCGCC AACTAAAGTT 
    GATAGATGCA GGATTGTTGA TGCAATAATC TCACATGGCT GCTTTCTACG AGAATGTAGT 
    GTGCAACATT CTATTGTAGG AGTTCGCTCA CGTTTAGAGA GTGGCGTTGA ACTTACAGAT 
    ACTATGATGA TGGGTGCTGA CTACTATCAA ACTGAATCTG AAATTGCCTC TCTGCTAGCA 
    GAAGGAAAGG TCCCAATTGG TGTTGGTCAA AATACCAAAA TCAGGAACTG TATTATCGAT 
    AAGAATGCCA AGATAGGAAA AGATGTGATC ATCACAAATG CTGATGGTGT TCAAGAAGCA 
    GACAGGCCAA GTGAAGGGTT TTACATTAGA TCAGGGATCA CAGCCGTACT GAAGAATGCA 
    GCAATCAAAG ATGGGACCCT TATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307668.2
    CDS1..1587
    Translation

    Target ORF information:

    RefSeq Version XM_002307632.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (LOC7477625), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307632.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATTCTT TCTGTGGAGC ATCGAAGGCA AGTGCTGGTG CCAATGTGGT TAATGTTAAC 
    AAGGGAAGTA TTAGAAATGA AGGGACTCAC TTTTGGGGTG AGAGGATTAA GAAGAACCCG 
    AAGAGCAGGG ATTTGAGTGC CCTGTTGTGG AAAAATCTGA GAAGCGGTGT GAAAAAGGCT 
    AAGCCTGGAG TTGCCTACTC TGTTCTTACA TCAGATGTTA ACAAAGAAAT TGTGACGTTT 
    GAAGCACCTG TGTTTGAGAC TCAACAAGCA GACCCAGGTA ATGTAGCTTC GATCATATTA 
    GGTGGAGGTG CTGGGACACG CCTCTTTCCT CTTACCAGCA AAAGAGCCAA GCCCGCGGTT 
    CCAATTGGAG GCTGTTACAG GCTGATTGAT ATTCCTATGA GTAATTGCAT CAACAGTGGG 
    ATAAAGAAGA TTTTCATCCT AACACAGTTT AACTCCTTCT CGCTCAATCG GCATATAGCT 
    CGCACGTATA ACCTTGGCAA TGGTGTTAGT TTTGGAGATG GATTTGTGGA GGTTTTGGCA 
    GCTACTCAAA CTCCAGGGGA AACAGGAAAG AAGTGGTTTC AAGGAACCGC AGATGCTGTG 
    AGGCAGTTTA TATGGGTGTT TGAGGATGCA AGGAACAAGA ACGTGGAGCA TGTATTGATC 
    TTGTCTGGTG ATCATCTTTA TCGAATGAAC TACATGGAAT TTGTCCAGAA GCATATCGAC 
    ACAAATGCAG ATGTTACAGT TTCCTGTGTG CCCATGGATG ACAGTCGTGC ATCAGATTAT 
    GGACTGATGA AGATTGACAA CACTGGACGT ATCGTTCAAT TTGCCGAGAA ACCCAAGGGC 
    CCTGATCTGA AAGCAATGCA AGTTGATACC ACTCTTCTTG GACTCTCCAG ACAAGAAGCT 
    ATGCAATTTC CCTATATTGC TTCAATGGGC GTTTATGTGT TTAGAACTGA TGTCCTGCTG 
    AAGCTTCTGA GGTGGAGCTA TCCCTCATGC AATGACTTCG GTTCCGAAAT CATTCCATCT 
    GCTGTGAGGG ATCATAATGT CCAGGCTTAC TTATTCAATG ACTACTGGGA GGACATTGGA 
    ACAGTAAAGT CATTTTTTGA TGCCAATTTG GGCCTCACGA AGCAGCCACC GAAGTTTGAA 
    TTTTATGATC CGCAGACACC TTTCTTCACC TCTCCTAGAT TCTTGCCGCC AACTAAAGTT 
    GATAGATGCA GGATTGTTGA TGCAATAATC TCACATGGCT GCTTTCTACG AGAATGTAGT 
    GTGCAACATT CTATTGTAGG AGTTCGCTCA CGTTTAGAGA GTGGCGTTGA ACTTACAGAT 
    ACTATGATGA TGGGTGCTGA CTACTATCAA ACTGAATCTG AAATTGCCTC TCTGCTAGCA 
    GAAGGAAAGG TCCCAATTGG TGTTGGTCAA AATACCAAAA TCAGGAACTG TATTATCGAT 
    AAGAATGCCA AGATAGGAAA AGATGTGATC ATCACAAATG CTGATGGTGT TCAAGAAGCA 
    GACAGGCCAA GTGAAGGGTT TTACATTAGA TCAGGGATCA CAGCCGTACT GAAGAATGCA 
    GCAATCAAAG ATGGGACCCT TATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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