ORF » Species Summary » Populus trichocarpa » LOC7477015 cDNA ORF clone

LOC7477015 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7477015 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7477015 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa23425 XM_002314490.2
Latest version!		 Populus trichocarpa flavin-containing monooxygenase family protein (POPTR_0010s07280g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa436993 XM_002314490.3
Latest version!		 Populus trichocarpa probable indole-3-pyruvate monooxygenase YUCCA3 (LOC7477015), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7477015 ( XM_002314490.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002314526.2 Populus trichocarpa flavin-containing monooxygenase family protein (POPTR_0010s07280g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa23425
    Clone ID Related Accession (Same CDS sequence) XM_002314490.2
    Accession Version XM_002314490.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1299bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product flavin-containing monooxygenase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). On Dec 16, 2013 this sequence version replaced XM_002314490.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGTATAACA CTTGTCTTAA AATACCAGAC ATGTTTCCAA CTTCTGGTCC TAATCATGGC 
    TTCTTTGCTC ACCGATGTGT ATGGGTGAAC GGACCTGTCA TAGTTGGGGC TGGCCCTTCA 
    GGTCTAGCTG TTGGTGCTGG CCTTAAAAGA CAAGGGGTGC CATTCGTTAT ACTCGAAAGA 
    GCAAACTGCA TTGCCTCTCT TTGGCAGAAC CGCACCTATG ATCGCCTCAA GCTTCACCTC 
    CCTAAGCAAT TCTGTCAACT ACCGGACTTC CCATTTCCAG AGGAGTTCCC AGAATATCCC 
    ACCAAATATC AGTTTATTAG CTATCTTGCA TCTTATGCTA AGCATTTCGA TATAAATCCA 
    CATTTCAATG AAATTGTGCA GTCTGCGAAG TATGATGAGA CCTTTGGTTT GTGGCGAGTT 
    AAAACCATTT CGACAAGCAG TTCAGATATT CCTAGTGAAG TTGAATACAT TTGCAAATGG 
    CTTGTGGTGG CCACTGGAGA GAATGCAGAG AAAGTTCTGC CAGAGTTTGA AGGCTTGCAG 
    GACTTTGGTG GCCATGTTAT GCATGCTTGC GACTACAAAT CCGGTGAAAG TTATCATGGA 
    AAGCGTGTGC TTGTTGTTGG CTGTGGCAAT TCAGGCATGG AGGTCTCTCT TGATCTATGC 
    AACCATAACG CAAGCCCATC AATGGTTGTT CGCAGCTCGG TTCATGTCTT GCCTAGGGAA 
    GTTCTTGGGA GATCAACATT TGAGTTGGCA GTAACAATGA TGAAATGGCT GCCACTTTGG 
    ATGGTCGACA AGGTATTATT ACTTCTTTCC AGGCTAATCC TCGGAAATGT TGAAAAATAT 
    GGTCTGAAAA GGCCATGTTT AGGACCTTTA CAGCTCAAGG ATACGCAAGG AAAAACCCCA 
    GTATTGGACA TTGGTGCACT AGAAAAAATA AGATCTGGTA AGATCAAGGT TGTCCCTGGA 
    ATCAAGAGAT TCTCTAGTGG CAAAGTGGAG CTTGTTAACA GTGAAATTCT TGAGATCGAT 
    TCTGTAATTC TGGCAACTGG GTATCGCAGC AATGTACCTT CATGGCTAAA GGAGAATGAA 
    TTCTTTACTG AAGACGGGAT TCCTAAAAAT CCATTCCCTA ATGGATGGAA AGGCAATGCC 
    GGGCTTTATG CAGTTGGGTT CACAAGGAGG GGTCTATCTG GGGCGTCTCT AGATGCTATG 
    AGCGTAGCAC TTGACATTGC CAAAATCTGG AAAGAAGAAA CCAAGCAAAA AAAGAAAACT 
    GTGGCAGCTC GTCACAGGAG ATGCATTTCA CATTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002314526.2
    CDS245..1543
    Translation

    Target ORF information:

    RefSeq Version XM_002314490.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa flavin-containing monooxygenase family protein (POPTR_0010s07280g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002314490.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGTATAACA CTTGTCTTAA AATACCAGAC ATGTTTCCAA CTTCTGGTCC TAATCATGGC 
    TTCTTTGCTC ACCGATGTGT ATGGGTGAAC GGACCTGTCA TAGTTGGGGC TGGCCCTTCA 
    GGTCTAGCTG TTGGTGCTGG CCTTAAAAGA CAAGGGGTGC CATTCGTTAT ACTCGAAAGA 
    GCAAACTGCA TTGCCTCTCT TTGGCAGAAC CGCACCTATG ATCGCCTCAA GCTTCACCTC 
    CCTAAGCAAT TCTGTCAACT ACCGGACTTC CCATTTCCAG AGGAGTTCCC AGAATATCCC 
    ACCAAATATC AGTTTATTAG CTATCTTGCA TCTTATGCTA AGCATTTCGA TATAAATCCA 
    CATTTCAATG AAATTGTGCA GTCTGCGAAG TATGATGAGA CCTTTGGTTT GTGGCGAGTT 
    AAAACCATTT CGACAAGCAG TTCAGATATT CCTAGTGAAG TTGAATACAT TTGCAAATGG 
    CTTGTGGTGG CCACTGGAGA GAATGCAGAG AAAGTTCTGC CAGAGTTTGA AGGCTTGCAG 
    GACTTTGGTG GCCATGTTAT GCATGCTTGC GACTACAAAT CCGGTGAAAG TTATCATGGA 
    AAGCGTGTGC TTGTTGTTGG CTGTGGCAAT TCAGGCATGG AGGTCTCTCT TGATCTATGC 
    AACCATAACG CAAGCCCATC AATGGTTGTT CGCAGCTCGG TTCATGTCTT GCCTAGGGAA 
    GTTCTTGGGA GATCAACATT TGAGTTGGCA GTAACAATGA TGAAATGGCT GCCACTTTGG 
    ATGGTCGACA AGGTATTATT ACTTCTTTCC AGGCTAATCC TCGGAAATGT TGAAAAATAT 
    GGTCTGAAAA GGCCATGTTT AGGACCTTTA CAGCTCAAGG ATACGCAAGG AAAAACCCCA 
    GTATTGGACA TTGGTGCACT AGAAAAAATA AGATCTGGTA AGATCAAGGT TGTCCCTGGA 
    ATCAAGAGAT TCTCTAGTGG CAAAGTGGAG CTTGTTAACA GTGAAATTCT TGAGATCGAT 
    TCTGTAATTC TGGCAACTGG GTATCGCAGC AATGTACCTT CATGGCTAAA GGAGAATGAA 
    TTCTTTACTG AAGACGGGAT TCCTAAAAAT CCATTCCCTA ATGGATGGAA AGGCAATGCC 
    GGGCTTTATG CAGTTGGGTT CACAAGGAGG GGTCTATCTG GGGCGTCTCT AGATGCTATG 
    AGCGTAGCAC TTGACATTGC CAAAATCTGG AAAGAAGAAA CCAAGCAAAA AAAGAAAACT 
    GTGGCAGCTC GTCACAGGAG ATGCATTTCA CATTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7477015 ( XM_002314490.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002314526.3 Populus trichocarpa probable indole-3-pyruvate monooxygenase YUCCA3 (LOC7477015), mRNA.
    Price & Availability↑
    CloneID OPa436993
    Clone ID Related Accession (Same CDS sequence) XM_002314490.3
    Accession Version XM_002314490.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1596bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable indole-3-pyruvate monooxygenase YUCCA3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002314490.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCCATGA CCCTCCCCTA TTTAACCCCT TCCGCCACCT CCTTCTCCCC TACACCCTTC 
    ACTTCAAACA AATTACATTT TATTCTCCTC TCGACTCTTC GTCCTATCCA TCTTTCCACA 
    CAAACTTCGA GCTTGCTAGT TTCTTCATTT GGAAGACAGC ATCCCCGTCA TTCTTTTCTC 
    CTCTCTCTAA TCTTCTATTT CCCACTTTGG AGATTAACTA CGTTTTGTTC AAAGACTTGT 
    CCTTTTCTCT TAATCCCTTC TTTCCATTTT AAAGAGCCAA CACACACACT CATCTTAATG 
    TATAACACTT GTCTTAAAAT ACCAGACATG TTTCCAACTT CTGGTCCTAA TCATGGCTTC 
    TTTGCTCACC GATGTGTATG GGTGAACGGA CCTGTCATAG TTGGGGCTGG CCCTTCAGGT 
    CTAGCTGTTG GTGCTGGCCT TAAAAGACAA GGGGTGCCAT TCGTTATACT CGAAAGAGCA 
    AACTGCATTG CCTCTCTTTG GCAGAACCGC ACCTATGATC GCCTCAAGCT TCACCTCCCT 
    AAGCAATTCT GTCAACTACC GGACTTCCCA TTTCCAGAGG AGTTCCCAGA ATATCCCACC 
    AAATATCAGT TTATTAGCTA TCTTGCATCT TATGCTAAGC ATTTCGATAT AAATCCACAT 
    TTCAATGAAA TTGTGCAGTC TGCGAAGTAT GATGAGACCT TTGGTTTGTG GCGAGTTAAA 
    ACCATTTCGA CAAGCAGTTC AGATATTCCT AGTGAAGTTG AATACATTTG CAAATGGCTT 
    GTGGTGGCCA CTGGAGAGAA TGCAGAGAAA GTTCTGCCAG AGTTTGAAGG CTTGCAGGAC 
    TTTGGTGGCC ATGTTATGCA TGCTTGCGAC TACAAATCCG GTGAAAGTTA TCATGGAAAG 
    CGTGTGCTTG TTGTTGGCTG TGGCAATTCA GGCATGGAGG TCTCTCTTGA TCTATGCAAC 
    CATAACGCAA GCCCATCAAT GGTTGTTCGC AGCTCGGTTC ATGTCTTGCC TAGGGAAGTT 
    CTTGGGAGAT CAACATTTGA GTTGGCAGTA ACAATGATGA AATGGCTGCC ACTTTGGATG 
    GTCGACAAGG TATTATTACT TCTTTCCAGG CTAATCCTCG GAAATGTTGA AAAATATGGT 
    CTGAAAAGGC CATGTTTAGG ACCTTTACAG CTCAAGGATA CGCAAGGAAA AACCCCAGTA 
    TTGGACATTG GTGCACTAGA AAAAATAAGA TCTGGTAAGA TCAAGGTTGT CCCTGGAATC 
    AAGAGATTCT CTAGTGGCAA AGTGGAGCTT GTTAACAGTG AAATTCTTGA GATCGATTCT 
    GTAATTCTGG CAACTGGGTA TCGCAGCAAT GTACCTTCAT GGCTAAAGGA GAATGAATTC 
    TTTACTGAAG ACGGGATTCC TAAAAATCCA TTCCCTAATG GATGGAAAGG CAATGCCGGG 
    CTTTATGCAG TTGGGTTCAC AAGGAGGGGT CTATCTGGGG CGTCTCTAGA TGCTATGAGC 
    GTAGCACTTG ACATTGCCAA AATCTGGAAA GAAGAAACCA AGCAAAAAAA GAAAACTGTG 
    GCAGCTCGTC ACAGGAGATG CATTTCACAT TTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002314526.3
    CDS189..1784
    Translation

    Target ORF information:

    RefSeq Version XM_002314490.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable indole-3-pyruvate monooxygenase YUCCA3 (LOC7477015), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002314490.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCCATGA CCCTCCCCTA TTTAACCCCT TCCGCCACCT CCTTCTCCCC TACACCCTTC 
    ACTTCAAACA AATTACATTT TATTCTCCTC TCGACTCTTC GTCCTATCCA TCTTTCCACA 
    CAAACTTCGA GCTTGCTAGT TTCTTCATTT GGAAGACAGC ATCCCCGTCA TTCTTTTCTC 
    CTCTCTCTAA TCTTCTATTT CCCACTTTGG AGATTAACTA CGTTTTGTTC AAAGACTTGT 
    CCTTTTCTCT TAATCCCTTC TTTCCATTTT AAAGAGCCAA CACACACACT CATCTTAATG 
    TATAACACTT GTCTTAAAAT ACCAGACATG TTTCCAACTT CTGGTCCTAA TCATGGCTTC 
    TTTGCTCACC GATGTGTATG GGTGAACGGA CCTGTCATAG TTGGGGCTGG CCCTTCAGGT 
    CTAGCTGTTG GTGCTGGCCT TAAAAGACAA GGGGTGCCAT TCGTTATACT CGAAAGAGCA 
    AACTGCATTG CCTCTCTTTG GCAGAACCGC ACCTATGATC GCCTCAAGCT TCACCTCCCT 
    AAGCAATTCT GTCAACTACC GGACTTCCCA TTTCCAGAGG AGTTCCCAGA ATATCCCACC 
    AAATATCAGT TTATTAGCTA TCTTGCATCT TATGCTAAGC ATTTCGATAT AAATCCACAT 
    TTCAATGAAA TTGTGCAGTC TGCGAAGTAT GATGAGACCT TTGGTTTGTG GCGAGTTAAA 
    ACCATTTCGA CAAGCAGTTC AGATATTCCT AGTGAAGTTG AATACATTTG CAAATGGCTT 
    GTGGTGGCCA CTGGAGAGAA TGCAGAGAAA GTTCTGCCAG AGTTTGAAGG CTTGCAGGAC 
    TTTGGTGGCC ATGTTATGCA TGCTTGCGAC TACAAATCCG GTGAAAGTTA TCATGGAAAG 
    CGTGTGCTTG TTGTTGGCTG TGGCAATTCA GGCATGGAGG TCTCTCTTGA TCTATGCAAC 
    CATAACGCAA GCCCATCAAT GGTTGTTCGC AGCTCGGTTC ATGTCTTGCC TAGGGAAGTT 
    CTTGGGAGAT CAACATTTGA GTTGGCAGTA ACAATGATGA AATGGCTGCC ACTTTGGATG 
    GTCGACAAGG TATTATTACT TCTTTCCAGG CTAATCCTCG GAAATGTTGA AAAATATGGT 
    CTGAAAAGGC CATGTTTAGG ACCTTTACAG CTCAAGGATA CGCAAGGAAA AACCCCAGTA 
    TTGGACATTG GTGCACTAGA AAAAATAAGA TCTGGTAAGA TCAAGGTTGT CCCTGGAATC 
    AAGAGATTCT CTAGTGGCAA AGTGGAGCTT GTTAACAGTG AAATTCTTGA GATCGATTCT 
    GTAATTCTGG CAACTGGGTA TCGCAGCAAT GTACCTTCAT GGCTAAAGGA GAATGAATTC 
    TTTACTGAAG ACGGGATTCC TAAAAATCCA TTCCCTAATG GATGGAAAGG CAATGCCGGG 
    CTTTATGCAG TTGGGTTCAC AAGGAGGGGT CTATCTGGGG CGTCTCTAGA TGCTATGAGC 
    GTAGCACTTG ACATTGCCAA AATCTGGAAA GAAGAAACCA AGCAAAAAAA GAAAACTGTG 
    GCAGCTCGTC ACAGGAGATG CATTTCACAT TTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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