ORF » Species Summary » Populus trichocarpa » POPTR_0002s11590g cDNA ORF clone

POPTR_0002s11590g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0002s11590g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0002s11590g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa05737 XM_002301104.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0002s11590g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa424290 XM_002301104.3
Latest version!		 Populus trichocarpa growth-regulating factor 1 (LOC7472639), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0002s11590g ( XM_002301104.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002301140.2 Populus trichocarpa hypothetical protein (POPTR_0002s11590g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa05737
    Clone ID Related Accession (Same CDS sequence) XM_002301104.2
    Accession Version XM_002301104.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1395bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002301104.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGATTTTG GGGTTCAGGT GGGTTTGGAT GGGTTGGTGG GTTCAGACAC AAGTAATAGT 
    GGTTTCGCTT CTCTTGCTAG TTCAGATCCT GAAGCAAAGC AGAAGTACGG ATCTGGGTTC 
    CTGAAGCAAG AGAGATCTGC CGCAGCCGAT GACGATTGGA GGAACTCTAA ATTGGCCAAA 
    ACCGAGTCAA TGCTGCTTGA CCAGAGAAAC ACTTTTCTTC TGAAATCTAG CAACAACTCT 
    CTCTTCACTG ATGGACAGCA GCAGCAGCAG ATGCTCAGCT TCTCCTGTCC CAAATCAGCT 
    TCTTCAGGGG AGAGAAGCTC CCCAAATGCC ATGTTGCCAT ACTTTCACCT CACATCTTCT 
    GCTTGTAATA GAAATACAGG CTACAACTCT GGAATCTTCA ATGCTGCCAG CATGCATGGG 
    GTTTTGACTG AGACTAGATG GCCATTCACT CAATTACAAT GGATGGAGCT TGAACATCAG 
    GCCTTGATCT ACAAATACAT GACTGCAAAT GTGCCTATAC CATCTAATCT GCTCATCCCC 
    ATTAGGAAAG CTCTTGATTC TGCTGGGTTT TCTAGCTTTT CTGGTGGACT TTTCAAACCC 
    AGTGCATTGC AATGGGGTAC TTTCCATATG GGTTTCTCCA GCAACACCGA TCCGGAGCCA 
    GGACGGTGTC GAAGAACAGA TGGGAAGAAA TGGCGGTGCT CAAGAGACGC AGTTGCTGAT 
    CAGAAGTATT GTGAGCGGCA CATGAACAGG GGTCGCCATC GTTCAAGAAA GCCTGTGGAA 
    GGACAATCAG GCCATTCCGC TGCGGCCACC ACCACTTTAA AGCCAATGGC CAATGGCACT 
    TCCTCTTTTG CATCAGCATC AGTGGTGGGG CTTCGCAGCG CTGTGTCCGA CAGCCACACT 
    ATTGTGCATA ATCAGCAGCA ACCTGCCAGT TCTTCTAATC TTTCTGCCAC CAATACGCTC 
    AGCAGGGTGT TCCTCGCTAC AGAGAATGTA GGTGAGAGAA TGCAAGATGC ATCGGGCTTA 
    TCCATGCTAC CATCCAGCAT TGACCTGAAA TCCAAAGAAA CTCCATTCTT CATATCAAAA 
    CAACAGAACT CTTACGGTGA ATCCCTGCAA AATGAGTTTG CACTTGTCAC GTCCGACTCC 
    CTCCTCAACC ATTCACAGAA AAGCTCGTCC TTGATGAGTT GCAGAAATTT TGGTTCGTCT 
    CAGGACCTTA CTGACCAGGA ATCTGTTTCA CAGCACTCCC TCCGCCAATT TATGGATGAT 
    TGTCCTAAAA GTCATTCTGA TCGCTCTGCT GTTGCTTGGC CTGGACTTGA TCTGCAATCT 
    GAGAGAACCC AGCTATCCAT GGCTCCTGCA GGCTCCTGCA GACTTTGTGT CATCCACTTC 
    ATCTTCAAAC AATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301140.2
    CDS1..1395
    Translation

    Target ORF information:

    RefSeq Version XM_002301104.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0002s11590g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301104.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGATTTTG GGGTTCAGGT GGGTTTGGAT GGGTTGGTGG GTTCAGACAC AAGTAATAGT 
    GGTTTCGCTT CTCTTGCTAG TTCAGATCCT GAAGCAAAGC AGAAGTACGG ATCTGGGTTC 
    CTGAAGCAAG AGAGATCTGC CGCAGCCGAT GACGATTGGA GGAACTCTAA ATTGGCCAAA 
    ACCGAGTCAA TGCTGCTTGA CCAGAGAAAC ACTTTTCTTC TGAAATCTAG CAACAACTCT 
    CTCTTCACTG ATGGACAGCA GCAGCAGCAG ATGCTCAGCT TCTCCTGTCC CAAATCAGCT 
    TCTTCAGGGG AGAGAAGCTC CCCAAATGCC ATGTTGCCAT ACTTTCACCT CACATCTTCT 
    GCTTGTAATA GAAATACAGG CTACAACTCT GGAATCTTCA ATGCTGCCAG CATGCATGGG 
    GTTTTGACTG AGACTAGATG GCCATTCACT CAATTACAAT GGATGGAGCT TGAACATCAG 
    GCCTTGATCT ACAAATACAT GACTGCAAAT GTGCCTATAC CATCTAATCT GCTCATCCCC 
    ATTAGGAAAG CTCTTGATTC TGCTGGGTTT TCTAGCTTTT CTGGTGGACT TTTCAAACCC 
    AGTGCATTGC AATGGGGTAC TTTCCATATG GGTTTCTCCA GCAACACCGA TCCGGAGCCA 
    GGACGGTGTC GAAGAACAGA TGGGAAGAAA TGGCGGTGCT CAAGAGACGC AGTTGCTGAT 
    CAGAAGTATT GTGAGCGGCA CATGAACAGG GGTCGCCATC GTTCAAGAAA GCCTGTGGAA 
    GGACAATCAG GCCATTCCGC TGCGGCCACC ACCACTTTAA AGCCAATGGC CAATGGCACT 
    TCCTCTTTTG CATCAGCATC AGTGGTGGGG CTTCGCAGCG CTGTGTCCGA CAGCCACACT 
    ATTGTGCATA ATCAGCAGCA ACCTGCCAGT TCTTCTAATC TTTCTGCCAC CAATACGCTC 
    AGCAGGGTGT TCCTCGCTAC AGAGAATGTA GGTGAGAGAA TGCAAGATGC ATCGGGCTTA 
    TCCATGCTAC CATCCAGCAT TGACCTGAAA TCCAAAGAAA CTCCATTCTT CATATCAAAA 
    CAACAGAACT CTTACGGTGA ATCCCTGCAA AATGAGTTTG CACTTGTCAC GTCCGACTCC 
    CTCCTCAACC ATTCACAGAA AAGCTCGTCC TTGATGAGTT GCAGAAATTT TGGTTCGTCT 
    CAGGACCTTA CTGACCAGGA ATCTGTTTCA CAGCACTCCC TCCGCCAATT TATGGATGAT 
    TGTCCTAAAA GTCATTCTGA TCGCTCTGCT GTTGCTTGGC CTGGACTTGA TCTGCAATCT 
    GAGAGAACCC AGCTATCCAT GGCTCCTGCA GGCTCCTGCA GACTTTGTGT CATCCACTTC 
    ATCTTCAAAC AATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0002s11590g ( XM_002301104.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002301140.3 Populus trichocarpa growth-regulating factor 1 (LOC7472639), mRNA.
    Price & Availability↑
    CloneID OPa424290
    Clone ID Related Accession (Same CDS sequence) XM_002301104.3
    Accession Version XM_002301104.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1803bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product LOW QUALITY PROTEIN: growth-regulating factor 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002301104.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGATTTTG GGGTTCAGGT GGGTTTGGAT GGGTTGGTGG GTTCAGACAC AAGTAATAGT 
    GGTTTCGCTT CTCTTGCTAG TTCAGATCCT GATGAAAAGC AGAAGTACGG ATCTGGGTTC 
    CTGAAGCAAG AGAGATCTGC CGCAGCCGAT GACGATTGGA GGAACTCTAA ATTGGCCAAA 
    ACCGAGTCAA TGCTGCTTGA CCAGAGAAAC ACTTTTCTTC TGAAATCTAG CAACAACTCT 
    CTCTTCACTG ATGGACAGCA GCAGCAGCAG ATGCTCAGCT TCTCCTGTCC CAAATCAGCT 
    TCTTCAGGGG AGAGAAGCTC CCCAAATGCC ATGTTGCCAT ACTTTCACCT CACATCTTCT 
    GCTTGTAATA GAAATACAGG CTACAACTCT GGAATCTTCA ATGCTGCCAG CATGCATGGG 
    GTTTTGACTG AGACTAGATG GCCATTCACT CAATTACAAT GGATGGAGCT TGAACATCAG 
    GCCTTGATCT ACAAATACAT GACTGCAAAT GTGCCTATAC CATCTAATCT GCTCATCCCC 
    ATTAGGAAAG CTCTTGATTC TGCTGGGTTT TCTAGCTTTT CTGGTGGACT TTTCAAACCC 
    AGTGCATTGC AATGGGGTAC TTTCCATATG GGTTTCTCCA GCAACACCGA TCCGGAGCCA 
    GGACGGTGTC GAAGAACAGA TGGGAAGAAA TGGCGGTGCT CAAGAGACGC AGTTGCTGAT 
    CAGAAGTATT GTGAGCGGCA CATGAACAGG GGTCGCCATC GTTCAAGAAA GCCTGTGGAA 
    GGACAATCAG GCCATTCCGC TGCGGCCACC ACCACTTTAA AGCCAATGGC CAATGGCACT 
    TCCTCTTTTG CATCAGCATC AGTGGTGGGG CTTCGCAGCG CTGTGTCCGA CAGCCACACT 
    ATTGTGCATA ATCAGCAGCA ACCTGCCAGT TCTTCTAATC TTTCTGCCAC CAATACGCTC 
    AGCAGGGTGT TCCTCGCTAC AGAGAATGTA GGTGAGAGAA TGCAAGATGC ATCGGGCTTA 
    TCCATGCTAC CATCCAGCAT TGACCTGAAA TCCAAAGAAA CTCCATTCTT CATATCAAAA 
    CAACAGAACT CTTACGGTGA ATCCCTGCAA AATGAGTTTG CACTTGTCAC GTCCGACTCC 
    CTCCTCAACC ATTCACAGAA AAGCTCGTCC TTGATGAGTT GCAGAAATTT TGGTTCGTCT 
    CAGGACCTTA CTGACCAGGA ATCTGTTTCA CAGCACTCCC TCCGCCAATT TATGGATGAT 
    TGTCCTAAAA GTCATTCTGA TCGCTCTGCT GTTGCTTGGC CTNGGACTTG ATCCCAGCTA 
    TCAATTTCAA TCCCCATGGC TCCTGCAGAC TTTGTGTCAT CCACTTCATC TTCAAACAAT 
    GAAAAGATCT CTCTCTCCCC GCTGAGATTA TCGCGTGAAT TTGATCCAAT AAAGATGGGG 
    CTGGGAGTGG GAGCCGGTAG TGTCGCCAAT GAACCAAACC AAAGGCAAGC GAATTGGATT 
    CCCATTTCTT GGGAAACTTC AATGGGTGGT CCACTTGGGG AGGTTTTGCA CAACACCAAT 
    AATAATGCAA CAGCAGAATG CAAGAATGAA TCATCGCTCA ACCTAATGAC AGAGAGATGG 
    GACAACAGTC CTCGGGTAGG CTCATCTCCT ACCGGGGTCT TACAAAAGTC TGCCTTTGCT 
    TCTCTTTCAA ATAGCAGTGC TGGAAGCAGC CCAAGAGCAG AGAACAAGAC CATTGAAGGT 
    GGCAATCTCT GCAATGACCT TGGATCTACT ATCGTGCATT CTTCATCATT GCCTGCCTTG 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301140.3
    CDS300..2102
    Translation

    Target ORF information:

    RefSeq Version XM_002301104.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa growth-regulating factor 1 (LOC7472639), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301104.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGATTTTG GGGTTCAGGT GGGTTTGGAT GGGTTGGTGG GTTCAGACAC AAGTAATAGT 
    GGTTTCGCTT CTCTTGCTAG TTCAGATCCT GATGAAAAGC AGAAGTACGG ATCTGGGTTC 
    CTGAAGCAAG AGAGATCTGC CGCAGCCGAT GACGATTGGA GGAACTCTAA ATTGGCCAAA 
    ACCGAGTCAA TGCTGCTTGA CCAGAGAAAC ACTTTTCTTC TGAAATCTAG CAACAACTCT 
    CTCTTCACTG ATGGACAGCA GCAGCAGCAG ATGCTCAGCT TCTCCTGTCC CAAATCAGCT 
    TCTTCAGGGG AGAGAAGCTC CCCAAATGCC ATGTTGCCAT ACTTTCACCT CACATCTTCT 
    GCTTGTAATA GAAATACAGG CTACAACTCT GGAATCTTCA ATGCTGCCAG CATGCATGGG 
    GTTTTGACTG AGACTAGATG GCCATTCACT CAATTACAAT GGATGGAGCT TGAACATCAG 
    GCCTTGATCT ACAAATACAT GACTGCAAAT GTGCCTATAC CATCTAATCT GCTCATCCCC 
    ATTAGGAAAG CTCTTGATTC TGCTGGGTTT TCTAGCTTTT CTGGTGGACT TTTCAAACCC 
    AGTGCATTGC AATGGGGTAC TTTCCATATG GGTTTCTCCA GCAACACCGA TCCGGAGCCA 
    GGACGGTGTC GAAGAACAGA TGGGAAGAAA TGGCGGTGCT CAAGAGACGC AGTTGCTGAT 
    CAGAAGTATT GTGAGCGGCA CATGAACAGG GGTCGCCATC GTTCAAGAAA GCCTGTGGAA 
    GGACAATCAG GCCATTCCGC TGCGGCCACC ACCACTTTAA AGCCAATGGC CAATGGCACT 
    TCCTCTTTTG CATCAGCATC AGTGGTGGGG CTTCGCAGCG CTGTGTCCGA CAGCCACACT 
    ATTGTGCATA ATCAGCAGCA ACCTGCCAGT TCTTCTAATC TTTCTGCCAC CAATACGCTC 
    AGCAGGGTGT TCCTCGCTAC AGAGAATGTA GGTGAGAGAA TGCAAGATGC ATCGGGCTTA 
    TCCATGCTAC CATCCAGCAT TGACCTGAAA TCCAAAGAAA CTCCATTCTT CATATCAAAA 
    CAACAGAACT CTTACGGTGA ATCCCTGCAA AATGAGTTTG CACTTGTCAC GTCCGACTCC 
    CTCCTCAACC ATTCACAGAA AAGCTCGTCC TTGATGAGTT GCAGAAATTT TGGTTCGTCT 
    CAGGACCTTA CTGACCAGGA ATCTGTTTCA CAGCACTCCC TCCGCCAATT TATGGATGAT 
    TGTCCTAAAA GTCATTCTGA TCGCTCTGCT GTTGCTTGGC CTNGGACTTG ATCCCAGCTA 
    TCAATTTCAA TCCCCATGGC TCCTGCAGAC TTTGTGTCAT CCACTTCATC TTCAAACAAT 
    GAAAAGATCT CTCTCTCCCC GCTGAGATTA TCGCGTGAAT TTGATCCAAT AAAGATGGGG 
    CTGGGAGTGG GAGCCGGTAG TGTCGCCAAT GAACCAAACC AAAGGCAAGC GAATTGGATT 
    CCCATTTCTT GGGAAACTTC AATGGGTGGT CCACTTGGGG AGGTTTTGCA CAACACCAAT 
    AATAATGCAA CAGCAGAATG CAAGAATGAA TCATCGCTCA ACCTAATGAC AGAGAGATGG 
    GACAACAGTC CTCGGGTAGG CTCATCTCCT ACCGGGGTCT TACAAAAGTC TGCCTTTGCT 
    TCTCTTTCAA ATAGCAGTGC TGGAAGCAGC CCAAGAGCAG AGAACAAGAC CATTGAAGGT 
    GGCAATCTCT GCAATGACCT TGGATCTACT ATCGTGCATT CTTCATCATT GCCTGCCTTG 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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