ORF » Species Summary » Populus trichocarpa » POPTR_0004s13480g cDNA ORF clone

POPTR_0004s13480g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0004s13480g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0004s13480g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa09874 XM_002305292.3
Latest version!		 Populus trichocarpa pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic (LOC7472564), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa09874 XM_002305292.2 Populus trichocarpa PYRUVATE DEHYDROGENASE E1 BETA family protein (POPTR_0004s13480g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0004s13480g ( XM_002305292.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002305328.1 Populus trichocarpa pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic (LOC7472564), mRNA.
    Price & Availability↑
    CloneID OPa09874
    Clone ID Related Accession (Same CDS sequence) XM_002305292.3 , XM_002305292.2
    Accession Version XM_002305292.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1257bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002305292.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGCCACCA TTTTCCAGGC ATTAGGAGGA GCTGCTGCTG CAGCAGCAGC TTCTTTAACC 
    AACTCCTTTG ATTCAAAGAA ATTACTTTTG CCTTCCTCGC GCAGATCCCT CGCAGAGAGA 
    AAAGCTAGCA GCTTTTTGGT GGTGAGATCT GATGGCAGTT TGAATCTGAA TCTTGGGAGT 
    TCTAATGGTA GAGCTCGTAC GGTTGATAAA TTGATTACAA ATGCAGTTGC AACAAAGGCT 
    GATACTTCTG CAGCTTCCTC TGCATCGAAA CCTGGGCATG AACTACTACT TTTTGAGGCC 
    CTTAGAGAAG GTTTGGAAGA GGAAATGGAC AGAGATCTGC ATGTCTGTGT CATGGGTGAA 
    GACGTGGGTC ATTATGGAGG TTCTTACAAG GTTACTAAAG GCCTAGCTGA GAAGTATGGG 
    GATCTCAGAG TTCTTGACAC CCCTATTGCT GAGAACTCCT TCACTGGTAT GGGCATTGGA 
    GCTGCCATGA CTGGCTTGAG GCCAATTATT GAGGGTATGA ACATGGGATT TCTTCTTCTA 
    GCCTTCAACC AGATCTCAAA CAATTGTGGC ATGCTCCACT ATACATCAGG TGGCCAGTTT 
    ACTATACCAG TTGTCATTCG TGGGCCTGGG GGAGTTGGAC GACAACTTGG AGCCGAGCAT 
    TCACAACGCC TCGAGTCATA TTTTCAATCA ATCCCTGGAA TCCAAATGGT TGCATGTTCA 
    ACCCCTTACA ATGCCAAGGG CTTGATGAAA GCTGCAATCC GAAGTGAGAA CCCGGTCATA 
    CTTTTTGAGC ATGTCTTGCT TTACAACCTC AAGGAGAGAA TCCCAGATGA AGAATACATT 
    TGCAATCTTG AGGAAGCTGA GATGGTTAGG CCTGGAGAGC ATGTCACTAT CTTAACCTAT 
    TCCCGGATGA GATATCATGT GATGCAGGCC GCCAAAACTT TAGTGAACAA GGGATATGAT 
    CCCGAAGTAA TTGATATCAG ATCATTGAAA CCATTTGATC TTCACATGAT TGGAAATTCT 
    GTGAAGAAGA CACATCGTGT TATGATTGTG GAGGAATGCA TGAGAACTGG TGGAATTGGT 
    GCTAGCTTGA CTGCAGCTAT CACTGAAAAT TTCCATGACT ATTTGGATGC TCCAATTGTG 
    TGCTTGTCTT CACAAGATGT GCCAACTCCT TATGCAGGGA CATTGGAGGA ATGGACAGTG 
    GTTCAACCTG CCCAGATTGT GACAGCAGTT GAGCAGCTGT GCCAGAAGTT ACAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002305328.1
    CDS212..1468
    Translation

    Target ORF information:

    RefSeq Version XM_002305292.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic (LOC7472564), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002305292.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGCCACCA TTTTCCAGGC ATTAGGAGGA GCTGCTGCTG CAGCAGCAGC TTCTTTAACC 
    AACTCCTTTG ATTCAAAGAA ATTACTTTTG CCTTCCTCGC GCAGATCCCT CGCAGAGAGA 
    AAAGCTAGCA GCTTTTTGGT GGTGAGATCT GATGGCAGTT TGAATCTGAA TCTTGGGAGT 
    TCTAATGGTA GAGCTCGTAC GGTTGATAAA TTGATTACAA ATGCAGTTGC AACAAAGGCT 
    GATACTTCTG CAGCTTCCTC TGCATCGAAA CCTGGGCATG AACTACTACT TTTTGAGGCC 
    CTTAGAGAAG GTTTGGAAGA GGAAATGGAC AGAGATCTGC ATGTCTGTGT CATGGGTGAA 
    GACGTGGGTC ATTATGGAGG TTCTTACAAG GTTACTAAAG GCCTAGCTGA GAAGTATGGG 
    GATCTCAGAG TTCTTGACAC CCCTATTGCT GAGAACTCCT TCACTGGTAT GGGCATTGGA 
    GCTGCCATGA CTGGCTTGAG GCCAATTATT GAGGGTATGA ACATGGGATT TCTTCTTCTA 
    GCCTTCAACC AGATCTCAAA CAATTGTGGC ATGCTCCACT ATACATCAGG TGGCCAGTTT 
    ACTATACCAG TTGTCATTCG TGGGCCTGGG GGAGTTGGAC GACAACTTGG AGCCGAGCAT 
    TCACAACGCC TCGAGTCATA TTTTCAATCA ATCCCTGGAA TCCAAATGGT TGCATGTTCA 
    ACCCCTTACA ATGCCAAGGG CTTGATGAAA GCTGCAATCC GAAGTGAGAA CCCGGTCATA 
    CTTTTTGAGC ATGTCTTGCT TTACAACCTC AAGGAGAGAA TCCCAGATGA AGAATACATT 
    TGCAATCTTG AGGAAGCTGA GATGGTTAGG CCTGGAGAGC ATGTCACTAT CTTAACCTAT 
    TCCCGGATGA GATATCATGT GATGCAGGCC GCCAAAACTT TAGTGAACAA GGGATATGAT 
    CCCGAAGTAA TTGATATCAG ATCATTGAAA CCATTTGATC TTCACATGAT TGGAAATTCT 
    GTGAAGAAGA CACATCGTGT TATGATTGTG GAGGAATGCA TGAGAACTGG TGGAATTGGT 
    GCTAGCTTGA CTGCAGCTAT CACTGAAAAT TTCCATGACT ATTTGGATGC TCCAATTGTG 
    TGCTTGTCTT CACAAGATGT GCCAACTCCT TATGCAGGGA CATTGGAGGA ATGGACAGTG 
    GTTCAACCTG CCCAGATTGT GACAGCAGTT GAGCAGCTGT GCCAGAAGTT ACAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0004s13480g ( XM_002305292.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002305328.1 Populus trichocarpa PYRUVATE DEHYDROGENASE E1 BETA family protein (POPTR_0004s13480g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa09874
    Clone ID Related Accession (Same CDS sequence) XM_002305292.3 , XM_002305292.2
    Accession Version XM_002305292.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1257bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product PYRUVATE DEHYDROGENASE E1 BETA family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). On Dec 16, 2013 this sequence version replaced XM_002305292.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGCCACCA TTTTCCAGGC ATTAGGAGGA GCTGCTGCTG CAGCAGCAGC TTCTTTAACC 
    AACTCCTTTG ATTCAAAGAA ATTACTTTTG CCTTCCTCGC GCAGATCCCT CGCAGAGAGA 
    AAAGCTAGCA GCTTTTTGGT GGTGAGATCT GATGGCAGTT TGAATCTGAA TCTTGGGAGT 
    TCTAATGGTA GAGCTCGTAC GGTTGATAAA TTGATTACAA ATGCAGTTGC AACAAAGGCT 
    GATACTTCTG CAGCTTCCTC TGCATCGAAA CCTGGGCATG AACTACTACT TTTTGAGGCC 
    CTTAGAGAAG GTTTGGAAGA GGAAATGGAC AGAGATCTGC ATGTCTGTGT CATGGGTGAA 
    GACGTGGGTC ATTATGGAGG TTCTTACAAG GTTACTAAAG GCCTAGCTGA GAAGTATGGG 
    GATCTCAGAG TTCTTGACAC CCCTATTGCT GAGAACTCCT TCACTGGTAT GGGCATTGGA 
    GCTGCCATGA CTGGCTTGAG GCCAATTATT GAGGGTATGA ACATGGGATT TCTTCTTCTA 
    GCCTTCAACC AGATCTCAAA CAATTGTGGC ATGCTCCACT ATACATCAGG TGGCCAGTTT 
    ACTATACCAG TTGTCATTCG TGGGCCTGGG GGAGTTGGAC GACAACTTGG AGCCGAGCAT 
    TCACAACGCC TCGAGTCATA TTTTCAATCA ATCCCTGGAA TCCAAATGGT TGCATGTTCA 
    ACCCCTTACA ATGCCAAGGG CTTGATGAAA GCTGCAATCC GAAGTGAGAA CCCGGTCATA 
    CTTTTTGAGC ATGTCTTGCT TTACAACCTC AAGGAGAGAA TCCCAGATGA AGAATACATT 
    TGCAATCTTG AGGAAGCTGA GATGGTTAGG CCTGGAGAGC ATGTCACTAT CTTAACCTAT 
    TCCCGGATGA GATATCATGT GATGCAGGCC GCCAAAACTT TAGTGAACAA GGGATATGAT 
    CCCGAAGTAA TTGATATCAG ATCATTGAAA CCATTTGATC TTCACATGAT TGGAAATTCT 
    GTGAAGAAGA CACATCGTGT TATGATTGTG GAGGAATGCA TGAGAACTGG TGGAATTGGT 
    GCTAGCTTGA CTGCAGCTAT CACTGAAAAT TTCCATGACT ATTTGGATGC TCCAATTGTG 
    TGCTTGTCTT CACAAGATGT GCCAACTCCT TATGCAGGGA CATTGGAGGA ATGGACAGTG 
    GTTCAACCTG CCCAGATTGT GACAGCAGTT GAGCAGCTGT GCCAGAAGTT ACAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002305328.1
    CDS187..1443
    Translation

    Target ORF information:

    RefSeq Version XM_002305292.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa PYRUVATE DEHYDROGENASE E1 BETA family protein (POPTR_0004s13480g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002305292.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGCCACCA TTTTCCAGGC ATTAGGAGGA GCTGCTGCTG CAGCAGCAGC TTCTTTAACC 
    AACTCCTTTG ATTCAAAGAA ATTACTTTTG CCTTCCTCGC GCAGATCCCT CGCAGAGAGA 
    AAAGCTAGCA GCTTTTTGGT GGTGAGATCT GATGGCAGTT TGAATCTGAA TCTTGGGAGT 
    TCTAATGGTA GAGCTCGTAC GGTTGATAAA TTGATTACAA ATGCAGTTGC AACAAAGGCT 
    GATACTTCTG CAGCTTCCTC TGCATCGAAA CCTGGGCATG AACTACTACT TTTTGAGGCC 
    CTTAGAGAAG GTTTGGAAGA GGAAATGGAC AGAGATCTGC ATGTCTGTGT CATGGGTGAA 
    GACGTGGGTC ATTATGGAGG TTCTTACAAG GTTACTAAAG GCCTAGCTGA GAAGTATGGG 
    GATCTCAGAG TTCTTGACAC CCCTATTGCT GAGAACTCCT TCACTGGTAT GGGCATTGGA 
    GCTGCCATGA CTGGCTTGAG GCCAATTATT GAGGGTATGA ACATGGGATT TCTTCTTCTA 
    GCCTTCAACC AGATCTCAAA CAATTGTGGC ATGCTCCACT ATACATCAGG TGGCCAGTTT 
    ACTATACCAG TTGTCATTCG TGGGCCTGGG GGAGTTGGAC GACAACTTGG AGCCGAGCAT 
    TCACAACGCC TCGAGTCATA TTTTCAATCA ATCCCTGGAA TCCAAATGGT TGCATGTTCA 
    ACCCCTTACA ATGCCAAGGG CTTGATGAAA GCTGCAATCC GAAGTGAGAA CCCGGTCATA 
    CTTTTTGAGC ATGTCTTGCT TTACAACCTC AAGGAGAGAA TCCCAGATGA AGAATACATT 
    TGCAATCTTG AGGAAGCTGA GATGGTTAGG CCTGGAGAGC ATGTCACTAT CTTAACCTAT 
    TCCCGGATGA GATATCATGT GATGCAGGCC GCCAAAACTT TAGTGAACAA GGGATATGAT 
    CCCGAAGTAA TTGATATCAG ATCATTGAAA CCATTTGATC TTCACATGAT TGGAAATTCT 
    GTGAAGAAGA CACATCGTGT TATGATTGTG GAGGAATGCA TGAGAACTGG TGGAATTGGT 
    GCTAGCTTGA CTGCAGCTAT CACTGAAAAT TTCCATGACT ATTTGGATGC TCCAATTGTG 
    TGCTTGTCTT CACAAGATGT GCCAACTCCT TATGCAGGGA CATTGGAGGA ATGGACAGTG 
    GTTCAACCTG CCCAGATTGT GACAGCAGTT GAGCAGCTGT GCCAGAAGTT ACAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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