ORF » Species Summary » Populus trichocarpa » POPTR_0007s04010g cDNA ORF clone

POPTR_0007s04010g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0007s04010g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0007s04010g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa17243 XM_002310476.2
Latest version!		 Populus trichocarpa transcription factor-related family protein (POPTR_0007s04010g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa433877 XM_002310476.3
Latest version!		 Populus trichocarpa general transcription and DNA repair factor IIH subunit TFB1-1 (LOC7466730), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa433878 XM_024605873.1
Latest version!		 Populus trichocarpa general transcription and DNA repair factor IIH subunit TFB1-1 (LOC7466730), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa433879 XM_024605874.1
Latest version!		 Populus trichocarpa general transcription and DNA repair factor IIH subunit TFB1-1 (LOC7466730), transcript variant X5, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0007s04010g ( XM_002310476.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002310512.2 Populus trichocarpa transcription factor-related family protein (POPTR_0007s04010g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa17243
    Clone ID Related Accession (Same CDS sequence) XM_002310476.2
    Accession Version XM_002310476.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1812bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product transcription factor-related family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008473). On Dec 16, 2013 this sequence version replaced XM_002310476.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGCAAGCG GGCAAGTGTC AAAACGAGTC AAGTTTAAGA GTTCAGTGAA AGACCCTGGC 
    ACTCCTGGTC GATTATACCT TACTTTGGAG AGGTTGATGT TCAAACCTAA TAGTCCCAAT 
    TCAGCTACAA AGCTTAATAT GGAGTTTAGA TTCGTTAAAA ATCATAAGTA CACTAAGGAG 
    GGATCAAATA AAGCACCAAT GCTTAATCTC ACTTCGAGTC AGGGTGTGAG TTACATATTT 
    GAGTTTGAAA GTTATGATGA TCTCCACGTT TGCAAAGAGT GTGTAGGCAA AGCCCTTTCG 
    AAGACTGGAG AGACACCAAA GCCTATAGAC ACTTCAGAAG TTCCTTCTGA ACAACCTAGC 
    ACAGAAGAAT TGCTTTTGCG GATGAATATG CTGCAAGAAA ATAGTGAGTT GCAGAACCTT 
    CATAAGCGGT TTGTGAGTGA TGGTATCTTG ACAGAAGCTG AATTTTGGGC AACTAGGAAG 
    AAGTTGCTTG GTGGGAACTT CAGCAAAAAG TCAAAACAAC GGACAGGCCT TAAAAGTTTC 
    GTGCTTTCAG ACACCAAGCC ATCAACAGAC GGTCGAACAA ACAAAGTTAC ATTTACTTTG 
    ACTCCTGAGA TTGTTCGTGA GGTTTTTGCA GAGAAACCAG CAGTACACCG AGCATACTTG 
    GATTTAGTTC CCAAAAAGAT GTCAGAAAGG GATTTCTGGA GCAAATATTG TAGAGCAGAA 
    TACCTCCAGC ATGCAAAAAA TGCTAATGCT GCAGCTGCTG CTGCAGCAGA AGCTGCTGAA 
    GATGAGGAGC TTGCTCTTTT CCTGAAACCT GATGATATTT TGGCTAGCGA AACTCGGCGG 
    AAGATCAGAT GTGTTGATCC AACTCTAAAC ATGGAAGCTG ATGAAGGGGA TGATTACACA 
    CATCTTCCAG ATCATGGGAT TGTCCGTGAT GGTAGCAAGG AAATAACTGA ATCACAGCAT 
    GAACTATATA TAAGAACTCT GTCACAGGAG CTAAACAGGC ATGCCGCTGT TGTTCTTCAA 
    GGAACACCTA TAGATGAGGA ACAATTAAAA GACACTCAGA CTGTAGCAGA GGCACTTAAA 
    CAGTCAAAAC AGGGACAGAA TGCTTCAAAT GAAGAAACTG ATATGAATGC AAACCAGGAC 
    AGATTAAGTA GGATTTCAAA AATGATGGAA ATTGATGATC TTCAGGCATC AAGTGATCTT 
    CCTTTGGCAC CACTTTCTAT CAAGGATCCA AGGGACTACT TTGATTCTCA ACAAGCTACT 
    GCTCTTAAAA ATTCAAGAGA TACCAGTATT GGAACTGATC CAGTAAAACG CATCCTGAGT 
    GCAGAAGAAT CATATGCTTC TTTGAGGGAC TCCATTTCCC TCATAAAAAC CACTGGATTG 
    GTCGATCCCA TAATTAAACC AGAAGTTGCA GTAAAGGTTC TTTCAGTCTT GACCCACAAT 
    ATCTCAAGCA CCAAATATGA TACTGGGAAG AATCATGGGC TAAGTGTTTT GGACACATTG 
    CCAAATACAA TTAAAGAGGA GCTGCTATAT CACTGGACGT CTCTTCAGGA GTTATTGAAG 
    CATTATTGGT CATCATATCC AATCACTACT ACTTATCTTT ATACTAAGGT AAGCAGATTG 
    AAGGATGCAA TGTCAAAAAT TGATTCACAG CTACAGGAGC TGAAGGAATC TGTGCAGTCA 
    GATCTTCGAC ATCAGGTCAC TCTACTTCTT CGACCAATGC AACAGGCTCT CGAGGCAGCC 
    ATGCAACATT ATGATGCAGA ATTGCAGAAG AGATCAGCGC GCAGTGGAGA TAGATCAAAT 
    GGATATACCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002310512.2
    CDS212..2023
    Translation

    Target ORF information:

    RefSeq Version XM_002310476.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa transcription factor-related family protein (POPTR_0007s04010g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002310476.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGCAAGCG GGCAAGTGTC AAAACGAGTC AAGTTTAAGA GTTCAGTGAA AGACCCTGGC 
    ACTCCTGGTC GATTATACCT TACTTTGGAG AGGTTGATGT TCAAACCTAA TAGTCCCAAT 
    TCAGCTACAA AGCTTAATAT GGAGTTTAGA TTCGTTAAAA ATCATAAGTA CACTAAGGAG 
    GGATCAAATA AAGCACCAAT GCTTAATCTC ACTTCGAGTC AGGGTGTGAG TTACATATTT 
    GAGTTTGAAA GTTATGATGA TCTCCACGTT TGCAAAGAGT GTGTAGGCAA AGCCCTTTCG 
    AAGACTGGAG AGACACCAAA GCCTATAGAC ACTTCAGAAG TTCCTTCTGA ACAACCTAGC 
    ACAGAAGAAT TGCTTTTGCG GATGAATATG CTGCAAGAAA ATAGTGAGTT GCAGAACCTT 
    CATAAGCGGT TTGTGAGTGA TGGTATCTTG ACAGAAGCTG AATTTTGGGC AACTAGGAAG 
    AAGTTGCTTG GTGGGAACTT CAGCAAAAAG TCAAAACAAC GGACAGGCCT TAAAAGTTTC 
    GTGCTTTCAG ACACCAAGCC ATCAACAGAC GGTCGAACAA ACAAAGTTAC ATTTACTTTG 
    ACTCCTGAGA TTGTTCGTGA GGTTTTTGCA GAGAAACCAG CAGTACACCG AGCATACTTG 
    GATTTAGTTC CCAAAAAGAT GTCAGAAAGG GATTTCTGGA GCAAATATTG TAGAGCAGAA 
    TACCTCCAGC ATGCAAAAAA TGCTAATGCT GCAGCTGCTG CTGCAGCAGA AGCTGCTGAA 
    GATGAGGAGC TTGCTCTTTT CCTGAAACCT GATGATATTT TGGCTAGCGA AACTCGGCGG 
    AAGATCAGAT GTGTTGATCC AACTCTAAAC ATGGAAGCTG ATGAAGGGGA TGATTACACA 
    CATCTTCCAG ATCATGGGAT TGTCCGTGAT GGTAGCAAGG AAATAACTGA ATCACAGCAT 
    GAACTATATA TAAGAACTCT GTCACAGGAG CTAAACAGGC ATGCCGCTGT TGTTCTTCAA 
    GGAACACCTA TAGATGAGGA ACAATTAAAA GACACTCAGA CTGTAGCAGA GGCACTTAAA 
    CAGTCAAAAC AGGGACAGAA TGCTTCAAAT GAAGAAACTG ATATGAATGC AAACCAGGAC 
    AGATTAAGTA GGATTTCAAA AATGATGGAA ATTGATGATC TTCAGGCATC AAGTGATCTT 
    CCTTTGGCAC CACTTTCTAT CAAGGATCCA AGGGACTACT TTGATTCTCA ACAAGCTACT 
    GCTCTTAAAA ATTCAAGAGA TACCAGTATT GGAACTGATC CAGTAAAACG CATCCTGAGT 
    GCAGAAGAAT CATATGCTTC TTTGAGGGAC TCCATTTCCC TCATAAAAAC CACTGGATTG 
    GTCGATCCCA TAATTAAACC AGAAGTTGCA GTAAAGGTTC TTTCAGTCTT GACCCACAAT 
    ATCTCAAGCA CCAAATATGA TACTGGGAAG AATCATGGGC TAAGTGTTTT GGACACATTG 
    CCAAATACAA TTAAAGAGGA GCTGCTATAT CACTGGACGT CTCTTCAGGA GTTATTGAAG 
    CATTATTGGT CATCATATCC AATCACTACT ACTTATCTTT ATACTAAGGT AAGCAGATTG 
    AAGGATGCAA TGTCAAAAAT TGATTCACAG CTACAGGAGC TGAAGGAATC TGTGCAGTCA 
    GATCTTCGAC ATCAGGTCAC TCTACTTCTT CGACCAATGC AACAGGCTCT CGAGGCAGCC 
    ATGCAACATT ATGATGCAGA ATTGCAGAAG AGATCAGCGC GCAGTGGAGA TAGATCAAAT 
    GGATATACCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0007s04010g ( XM_002310476.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002310512.3 Populus trichocarpa general transcription and DNA repair factor IIH subunit TFB1-1 (LOC7466730), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa433877
    Clone ID Related Accession (Same CDS sequence) XM_002310476.3
    Accession Version XM_002310476.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1812bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product general transcription and DNA repair factor IIH subunit TFB1-1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037291.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002310476.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGCAAGCG GGCAAGTGTC AAAACGAGTC AAGTTTAAGA GTTCAGTGAA AGACCCTGGC 
    ACTCCTGGTC GATTATACCT TACTTTGGAG AGGTTGATGT TCAAACCTAA TAGTCCCAAT 
    TCAGCTACAA AGCTTAATAT GGAGTTTAGA TTCGTTAAAA ATCATAAGTA CACTAAGGAG 
    GGATCAAATA AAGCACCAAT GCTTAATCTC ACTTCGAGTC AGGGTGTGAG TTACATCTTT 
    GAGTTTGAAA GTTATGATGA TCTCCACGTT TGCAAAGAGT GTGTAGGCAA AGCCCTTTCG 
    AAGACTGGAG AGACACCAAA GCCTATAGAC ACTTCAGAAG TTCCTTCTGA ACAACCTAGC 
    ACAGAAGAAT TGCTTTTGCG GATGAATATG CTGCAAGAAA ATAGTGAGTT GCAGAACCTT 
    CATAAGCGGT TTGTGAGTGA TGGTATCTTG ACAGAAGCTG AATTTTGGGC AACTAGGAAG 
    AAGTTGCTTG GTGGGAACTT CAGCAAAAAG TCAAAACAAC GGACAGGCCT TAAAAGTTTC 
    GTGCTTTCAG ACACCAAGCC ATCAACAGAC GGTCGAACAA ACAAAGTTAC ATTTACTTTG 
    ACTCCTGAGA TTGTTCGTGA GGTTTTTGCA GAGAAACCAG CAGTACACCG AGCATACTTG 
    GATTTAGTTC CCAAAAAGAT GTCAGAAAGG GATTTCTGGA GCAAATATTG TAGAGCAGAA 
    TACCTCCAGC ATGCAAAAAA TGCTAATGCT GCAGCTGCTG CTGCAGCAGA AGCTGCTGAA 
    GATGAGGAGC TTGCTCTTTT CCTGAAACCT GATGATATTT TGGCTAGCGA AACTCGGCGG 
    AAGATCAGAT GTGTTGATCC AACTCTAAAC ATGGAAGCTG ATGAAGGGGA TGATTATACA 
    CATCTTCCAG ATCATGGGAT TGTCCGTGAT GGTAGCAAGG AAATAACTGA ATCACAGCAT 
    GAACTATATA TAAGAACTCT GTCGCAGGAG CTAAACAGGC ATGCCGCTGT TGTTCTTCAA 
    GGAACACCTA TAGATGAGGA ACAATTAAAA GACACTCAGA CTGTAGCAGA GGCACTTAAA 
    CAGTCAAAAC AGGGACAGAA TGCTTCAAAT GAAGAAACTT ATGTGAATGC AAACCAGGAC 
    AGATTAAGTA GGATTTCAAA AATGATGGAA ATTGATGATC TTCAGGCGTC AAGTGATCTT 
    CCTTTGGCAC CACTTTCTAT CAAGGATCCA AGGGACTACT TTGATTCTCA ACAAGCTACT 
    GCTCTTAAAA ATTCAAGAGA TACCAGTATT GGAACTGATC CAGTAAAACG CATCCTGAGT 
    GCAGAAGAAT CATATGCTTC TTTGAGGGAC TCCATTTCCC TCATAAAAAC CACTGGATTG 
    GTCGATCCCA TAATTAAACC AGAAGTTGCA GTAAAGGTTC TTTCAGTCTT GACCCACAAT 
    ATCTCAAGCA CCAAATATGA TACTGGGAAG AATCATGGGC TAAGTGTTTT GGACACATTG 
    CCAAATACAA TTAAAGAGGA GCTGCTATAT CACTGGACGT CTCTTCAGGA GTTATTGAAG 
    CATTATTGGT CATCATATCC AATCACTACT ACTTATCTTT ATACTAAGGT AAGCAGATTG 
    AAGGATGCAA TGTCAAAAAT TGATTCACAG CTACAGGAGC TGAAGGAATC TGTGCAGTCA 
    GATCTTCGAC ATCAGGTCAC TCTACTTCTT CGACCAATGC AACAGGCTCT CGAGGCAGCC 
    ATGCAACATT ATGATGCCGA ATTGCAGAAG AGATCAGCGC GCAGTGGAGA TAGATCAAAT 
    GGATATACCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002310512.3
    CDS265..2076
    Translation

    Target ORF information:

    RefSeq Version XM_002310476.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa general transcription and DNA repair factor IIH subunit TFB1-1 (LOC7466730), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002310476.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGCAAGCG GGCAAGTGTC AAAACGAGTC AAGTTTAAGA GTTCAGTGAA AGACCCTGGC 
    ACTCCTGGTC GATTATACCT TACTTTGGAG AGGTTGATGT TCAAACCTAA TAGTCCCAAT 
    TCAGCTACAA AGCTTAATAT GGAGTTTAGA TTCGTTAAAA ATCATAAGTA CACTAAGGAG 
    GGATCAAATA AAGCACCAAT GCTTAATCTC ACTTCGAGTC AGGGTGTGAG TTACATCTTT 
    GAGTTTGAAA GTTATGATGA TCTCCACGTT TGCAAAGAGT GTGTAGGCAA AGCCCTTTCG 
    AAGACTGGAG AGACACCAAA GCCTATAGAC ACTTCAGAAG TTCCTTCTGA ACAACCTAGC 
    ACAGAAGAAT TGCTTTTGCG GATGAATATG CTGCAAGAAA ATAGTGAGTT GCAGAACCTT 
    CATAAGCGGT TTGTGAGTGA TGGTATCTTG ACAGAAGCTG AATTTTGGGC AACTAGGAAG 
    AAGTTGCTTG GTGGGAACTT CAGCAAAAAG TCAAAACAAC GGACAGGCCT TAAAAGTTTC 
    GTGCTTTCAG ACACCAAGCC ATCAACAGAC GGTCGAACAA ACAAAGTTAC ATTTACTTTG 
    ACTCCTGAGA TTGTTCGTGA GGTTTTTGCA GAGAAACCAG CAGTACACCG AGCATACTTG 
    GATTTAGTTC CCAAAAAGAT GTCAGAAAGG GATTTCTGGA GCAAATATTG TAGAGCAGAA 
    TACCTCCAGC ATGCAAAAAA TGCTAATGCT GCAGCTGCTG CTGCAGCAGA AGCTGCTGAA 
    GATGAGGAGC TTGCTCTTTT CCTGAAACCT GATGATATTT TGGCTAGCGA AACTCGGCGG 
    AAGATCAGAT GTGTTGATCC AACTCTAAAC ATGGAAGCTG ATGAAGGGGA TGATTATACA 
    CATCTTCCAG ATCATGGGAT TGTCCGTGAT GGTAGCAAGG AAATAACTGA ATCACAGCAT 
    GAACTATATA TAAGAACTCT GTCGCAGGAG CTAAACAGGC ATGCCGCTGT TGTTCTTCAA 
    GGAACACCTA TAGATGAGGA ACAATTAAAA GACACTCAGA CTGTAGCAGA GGCACTTAAA 
    CAGTCAAAAC AGGGACAGAA TGCTTCAAAT GAAGAAACTT ATGTGAATGC AAACCAGGAC 
    AGATTAAGTA GGATTTCAAA AATGATGGAA ATTGATGATC TTCAGGCGTC AAGTGATCTT 
    CCTTTGGCAC CACTTTCTAT CAAGGATCCA AGGGACTACT TTGATTCTCA ACAAGCTACT 
    GCTCTTAAAA ATTCAAGAGA TACCAGTATT GGAACTGATC CAGTAAAACG CATCCTGAGT 
    GCAGAAGAAT CATATGCTTC TTTGAGGGAC TCCATTTCCC TCATAAAAAC CACTGGATTG 
    GTCGATCCCA TAATTAAACC AGAAGTTGCA GTAAAGGTTC TTTCAGTCTT GACCCACAAT 
    ATCTCAAGCA CCAAATATGA TACTGGGAAG AATCATGGGC TAAGTGTTTT GGACACATTG 
    CCAAATACAA TTAAAGAGGA GCTGCTATAT CACTGGACGT CTCTTCAGGA GTTATTGAAG 
    CATTATTGGT CATCATATCC AATCACTACT ACTTATCTTT ATACTAAGGT AAGCAGATTG 
    AAGGATGCAA TGTCAAAAAT TGATTCACAG CTACAGGAGC TGAAGGAATC TGTGCAGTCA 
    GATCTTCGAC ATCAGGTCAC TCTACTTCTT CGACCAATGC AACAGGCTCT CGAGGCAGCC 
    ATGCAACATT ATGATGCCGA ATTGCAGAAG AGATCAGCGC GCAGTGGAGA TAGATCAAAT 
    GGATATACCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0007s04010g ( XM_024605873.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024461641.1 Populus trichocarpa general transcription and DNA repair factor IIH subunit TFB1-1 (LOC7466730), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa433878
    Clone ID Related Accession (Same CDS sequence) XM_024605873.1
    Accession Version XM_024605873.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1683bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product general transcription and DNA repair factor IIH subunit TFB1-1 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037291.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCAAGCG GGCAAGTGTC AAAACGAGTC AAGTTTAAGA GTTCAGTGAA AGACCCTGGC 
    ACTCCTGGTC GATTATACCT TACTTTGGAG AGGTTGATGT TCAAACCTAA TAGTCCCAAT 
    TCAGCTACAA AGCTTAATAT GGAGTTTAGA TTCGTTAAAA ATCATAAGTA CACTAAGGAG 
    GGATCAAATA AAGCACCAAT GCTTAATCTC ACTTCGAGTC AGGGTGTGAG TTACATCTTT 
    GAGTTTGAAA GTTATGATGA TCTCCACGTT TGCAAAGAGT GTGTAGGCAA AGCCCTTTCG 
    AAGACTGGAG AGACACCAAA GCCTATAGAC ACTTCAGAAG TTCCTTCTGA ACAACCTAGC 
    ACAGAAGAAT TGCTTTTGCG GATGAATATG CTGCAAGAAA ATAGTGAGTT GCAGAACCTT 
    CATAAGCGGT TTGTGAGTGA TGGTATCTTG ACAGAAGCTG AATTTTGGGC AACTAGGAAG 
    AAGTTGCTTG GTGGGAACTT CAGCAAAAAG TCAAAACAAC GGACAGGCCT TAAAAGTTTC 
    GTGCTTTCAG ACACCAAGCC ATCAACAGAC GGTCGAACAA ACAAAGTTAC ATTTACTTTG 
    ACTCCTGAGA TTGTTCGTGA GGTTTTTGCA GAGAAACCAG CAGTACACCG AGCATACTTG 
    GATTTAGTTC CCAAAAAGAT GTCAGAAAGG GATTTCTGGA GCAAATATTG TAGAGCAGAA 
    TACCTCCAGC ATGCAAAAAA TGCTAATGCT GCAGCTGCTG CTGCAGCAGA AGCTGCTGAA 
    GATGAGGAGC TTGCTCTTTT CCTGAAACCT GATGATATTT TGGCTAGCGA AACTCGGCGG 
    AAGATCAGAT GTGTTGATCC AACTCTAAAC ATGGAAGCTG ATGAAGGGGA TGATTATACA 
    CATCTTCCAG ATCATGGGAT TGTCCGTGAT GGTAGCAAGG AAATAACTGA ATCACAGCAT 
    GAACTATATA TAAGAACTCT GTCGCAGGAG CTAAACAGGC ATGCCGCTGT TGTTCTTCAA 
    GGAACACCTA TAGATGAGGA ACAATTAAAA GACACTCAGA CTGTAGCAGA GGCACTTAAA 
    CAGTCAAAAC AGGGACAGAA TGCTTCAAAT GAAGAAACTT ATGTGAATGC AAACCAGGAC 
    AGATTAAGTA GGATTTCAAA AATGATGGAA ATTGATGATC TTCAGGCGTC AAGTGATCTT 
    CCTTTGGCAC CACTTTCTAT CAAGGATCCA AGGGACTACT TTGATTCTCA ACAAGCTACT 
    GCTCTTAAAA ATTCAAGAGA TACCAGTATT GGAACTGATC CAGTAAAACG CATCCTGAGT 
    GCAGAAGAAT CATATGCTTC TTTGAGGGAC TCCATTTCCC TCATAAAAAC CACTGGATTG 
    GTCGATCCCA TAATTAAACC AGAAGTTGCA GTAAAGGTTC TTTCAGTCTT GACCCACAAT 
    ATCTCAAGCA CCAAATATGA TACTGGGAAG AATCATGGGC TAAGTGTTTT GGACACATTG 
    CCAAATACAA TTAAAGAGGA GCTGCTATAT CACTGGACGT CTCTTCAGGA GTTATTGAAG 
    CATTATTGGT CATCATATCC AATCACTACT ACTTATCTTT ATACTAAGGT AAGCAGATTG 
    AAGGATGCAA TGTCAAAAAT TGATTCACAG CTACAGGTGA ATTTGGCAAT AAGCTTATTG 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024461641.1
    CDS265..1947
    Translation

    Target ORF information:

    RefSeq Version XM_024605873.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa general transcription and DNA repair factor IIH subunit TFB1-1 (LOC7466730), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024605873.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCAAGCG GGCAAGTGTC AAAACGAGTC AAGTTTAAGA GTTCAGTGAA AGACCCTGGC 
    ACTCCTGGTC GATTATACCT TACTTTGGAG AGGTTGATGT TCAAACCTAA TAGTCCCAAT 
    TCAGCTACAA AGCTTAATAT GGAGTTTAGA TTCGTTAAAA ATCATAAGTA CACTAAGGAG 
    GGATCAAATA AAGCACCAAT GCTTAATCTC ACTTCGAGTC AGGGTGTGAG TTACATCTTT 
    GAGTTTGAAA GTTATGATGA TCTCCACGTT TGCAAAGAGT GTGTAGGCAA AGCCCTTTCG 
    AAGACTGGAG AGACACCAAA GCCTATAGAC ACTTCAGAAG TTCCTTCTGA ACAACCTAGC 
    ACAGAAGAAT TGCTTTTGCG GATGAATATG CTGCAAGAAA ATAGTGAGTT GCAGAACCTT 
    CATAAGCGGT TTGTGAGTGA TGGTATCTTG ACAGAAGCTG AATTTTGGGC AACTAGGAAG 
    AAGTTGCTTG GTGGGAACTT CAGCAAAAAG TCAAAACAAC GGACAGGCCT TAAAAGTTTC 
    GTGCTTTCAG ACACCAAGCC ATCAACAGAC GGTCGAACAA ACAAAGTTAC ATTTACTTTG 
    ACTCCTGAGA TTGTTCGTGA GGTTTTTGCA GAGAAACCAG CAGTACACCG AGCATACTTG 
    GATTTAGTTC CCAAAAAGAT GTCAGAAAGG GATTTCTGGA GCAAATATTG TAGAGCAGAA 
    TACCTCCAGC ATGCAAAAAA TGCTAATGCT GCAGCTGCTG CTGCAGCAGA AGCTGCTGAA 
    GATGAGGAGC TTGCTCTTTT CCTGAAACCT GATGATATTT TGGCTAGCGA AACTCGGCGG 
    AAGATCAGAT GTGTTGATCC AACTCTAAAC ATGGAAGCTG ATGAAGGGGA TGATTATACA 
    CATCTTCCAG ATCATGGGAT TGTCCGTGAT GGTAGCAAGG AAATAACTGA ATCACAGCAT 
    GAACTATATA TAAGAACTCT GTCGCAGGAG CTAAACAGGC ATGCCGCTGT TGTTCTTCAA 
    GGAACACCTA TAGATGAGGA ACAATTAAAA GACACTCAGA CTGTAGCAGA GGCACTTAAA 
    CAGTCAAAAC AGGGACAGAA TGCTTCAAAT GAAGAAACTT ATGTGAATGC AAACCAGGAC 
    AGATTAAGTA GGATTTCAAA AATGATGGAA ATTGATGATC TTCAGGCGTC AAGTGATCTT 
    CCTTTGGCAC CACTTTCTAT CAAGGATCCA AGGGACTACT TTGATTCTCA ACAAGCTACT 
    GCTCTTAAAA ATTCAAGAGA TACCAGTATT GGAACTGATC CAGTAAAACG CATCCTGAGT 
    GCAGAAGAAT CATATGCTTC TTTGAGGGAC TCCATTTCCC TCATAAAAAC CACTGGATTG 
    GTCGATCCCA TAATTAAACC AGAAGTTGCA GTAAAGGTTC TTTCAGTCTT GACCCACAAT 
    ATCTCAAGCA CCAAATATGA TACTGGGAAG AATCATGGGC TAAGTGTTTT GGACACATTG 
    CCAAATACAA TTAAAGAGGA GCTGCTATAT CACTGGACGT CTCTTCAGGA GTTATTGAAG 
    CATTATTGGT CATCATATCC AATCACTACT ACTTATCTTT ATACTAAGGT AAGCAGATTG 
    AAGGATGCAA TGTCAAAAAT TGATTCACAG CTACAGGTGA ATTTGGCAAT AAGCTTATTG 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0007s04010g ( XM_024605874.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024461642.1 Populus trichocarpa general transcription and DNA repair factor IIH subunit TFB1-1 (LOC7466730), transcript variant X5, mRNA.
    Price & Availability↑
    CloneID OPa433879
    Clone ID Related Accession (Same CDS sequence) XM_024605874.1
    Accession Version XM_024605874.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1602bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product general transcription and DNA repair factor IIH subunit TFB1-1 isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037291.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAAGCG GGCAAGTGTC AAAACGAGTC AAGTTTAAGA GTTCAGTGAA AGACCCTGGC 
    ACTCCTGGTC GATTATACCT TACTTTGGAG AGGTTGATGT TCAAACCTAA TAGTCCCAAT 
    TCAGCTACAA AGCTTAATAT GGAGTTTAGA TTCGTTAAAA ATCATAAGTA CACTAAGGAG 
    GGATCAAATA AAGCACCAAT GCTTAATCTC ACTTCGAGTC AGGGTGTGAG TTACATCTTT 
    GAGTTTGAAA GTTATGATGA TCTCCACGTT TGCAAAGAGT GTGTAGGCAA AGCCCTTTCG 
    AAGACTGGAG AGACACCAAA GCCTATAGAC ACTTCAGAAG TTCCTTCTGA ACAACCTAGC 
    ACAGAAGAAT TGCTTTTGCG GATGAATATG CTGCAAGAAA ATAGTGAGTT GCAGAACCTT 
    CATAAGCGGT TTGTGAGTGA TGGTATCTTG ACAGAAGCTG AATTTTGGGC AACTAGGAAG 
    AAGTTGCTTG GTGGGAACTT CAGCAAAAAG TCAAAACAAC GGACAGGCCT TAAAAGTTTC 
    GTGCTTTCAG ACACCAAGCC ATCAACAGAC GGTCGAACAA ACAAAGTTAC ATTTACTTTG 
    ACTCCTGAGA TTGTTCGTGA GGTTTTTGCA GAGAAACCAG CAGTACACCG AGCATACTTG 
    GATTTAGTTC CCAAAAAGAT GTCAGAAAGG GATTTCTGGA GCAAATATTG TAGAGCAGAA 
    TACCTCCAGC ATGCAAAAAA TGCTAATGCT GCAGCTGCTG CTGCAGCAGA AGCTGCTGAA 
    GATGAGGAGC TTGCTCTTTT CCTGAAACCT GATGATATTT TGGCTAGCGA AACTCGGCGG 
    AAGATCAGAT GTGTTGATCC AACTCTAAAC ATGGAAGCTG ATGAAGGGGA TGATTATACA 
    CATCTTCCAG ATCATGGGAT TGTCCGTGAT GGTAGCAAGG AAATAACTGA ATCACAGCAT 
    GAACTATATA TAAGAACTCT GTCGCAGGAG CTAAACAGGC ATGCCGCTGT TGTTCTTCAA 
    GGAACACCTA TAGATGAGGA ACAATTAAAA GACACTCAGA CTGTAGCAGA GGCACTTAAA 
    CAGTCAAAAC AGGGACAGAA TGCTTCAAAT GAAGAAACTT ATGTGAATGC AAACCAGGAC 
    AGATTAAGTA GGATTTCAAA AATGATGGAA ATTGATGATC TTCAGGCGTC AAGTGATCTT 
    CCTTTGGCAC CACTTTCTAT CAAGGATCCA AGGGACTACT TTGATTCTCA ACAAGCTACT 
    GCTCTTAAAA ATTCAAGAGA TACCAGTATT GGAACTGATC CAGTAAAACG CATCCTGAGT 
    GCAGAAGAAT CATATGCTTC TTTGAGGGAC TCCATTTCCC TCATAAAAAC CACTGGATTG 
    GTCGATCCCA TAATTAAACC AGAAGTTGCA GTAAAGGTTC TTTCAGTCTT GACCCACAAT 
    ATCTCAAGCA CCAAATATGA TACTGGGAAG AATCATGGGC TAAGTGTTTT GGACACATTG 
    CCAAATACAA TTAAAGAGGA GCTGCTATAT ATTTTGGTTT CGTTTCTTAT GTTCATGTGG 
    AAACTTGCCT TCAGCACTGG ACGTCTCTTC AGGAGTTATT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024461642.1
    CDS266..1867
    Translation

    Target ORF information:

    RefSeq Version XM_024605874.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa general transcription and DNA repair factor IIH subunit TFB1-1 (LOC7466730), transcript variant X5, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024605874.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAAGCG GGCAAGTGTC AAAACGAGTC AAGTTTAAGA GTTCAGTGAA AGACCCTGGC 
    ACTCCTGGTC GATTATACCT TACTTTGGAG AGGTTGATGT TCAAACCTAA TAGTCCCAAT 
    TCAGCTACAA AGCTTAATAT GGAGTTTAGA TTCGTTAAAA ATCATAAGTA CACTAAGGAG 
    GGATCAAATA AAGCACCAAT GCTTAATCTC ACTTCGAGTC AGGGTGTGAG TTACATCTTT 
    GAGTTTGAAA GTTATGATGA TCTCCACGTT TGCAAAGAGT GTGTAGGCAA AGCCCTTTCG 
    AAGACTGGAG AGACACCAAA GCCTATAGAC ACTTCAGAAG TTCCTTCTGA ACAACCTAGC 
    ACAGAAGAAT TGCTTTTGCG GATGAATATG CTGCAAGAAA ATAGTGAGTT GCAGAACCTT 
    CATAAGCGGT TTGTGAGTGA TGGTATCTTG ACAGAAGCTG AATTTTGGGC AACTAGGAAG 
    AAGTTGCTTG GTGGGAACTT CAGCAAAAAG TCAAAACAAC GGACAGGCCT TAAAAGTTTC 
    GTGCTTTCAG ACACCAAGCC ATCAACAGAC GGTCGAACAA ACAAAGTTAC ATTTACTTTG 
    ACTCCTGAGA TTGTTCGTGA GGTTTTTGCA GAGAAACCAG CAGTACACCG AGCATACTTG 
    GATTTAGTTC CCAAAAAGAT GTCAGAAAGG GATTTCTGGA GCAAATATTG TAGAGCAGAA 
    TACCTCCAGC ATGCAAAAAA TGCTAATGCT GCAGCTGCTG CTGCAGCAGA AGCTGCTGAA 
    GATGAGGAGC TTGCTCTTTT CCTGAAACCT GATGATATTT TGGCTAGCGA AACTCGGCGG 
    AAGATCAGAT GTGTTGATCC AACTCTAAAC ATGGAAGCTG ATGAAGGGGA TGATTATACA 
    CATCTTCCAG ATCATGGGAT TGTCCGTGAT GGTAGCAAGG AAATAACTGA ATCACAGCAT 
    GAACTATATA TAAGAACTCT GTCGCAGGAG CTAAACAGGC ATGCCGCTGT TGTTCTTCAA 
    GGAACACCTA TAGATGAGGA ACAATTAAAA GACACTCAGA CTGTAGCAGA GGCACTTAAA 
    CAGTCAAAAC AGGGACAGAA TGCTTCAAAT GAAGAAACTT ATGTGAATGC AAACCAGGAC 
    AGATTAAGTA GGATTTCAAA AATGATGGAA ATTGATGATC TTCAGGCGTC AAGTGATCTT 
    CCTTTGGCAC CACTTTCTAT CAAGGATCCA AGGGACTACT TTGATTCTCA ACAAGCTACT 
    GCTCTTAAAA ATTCAAGAGA TACCAGTATT GGAACTGATC CAGTAAAACG CATCCTGAGT 
    GCAGAAGAAT CATATGCTTC TTTGAGGGAC TCCATTTCCC TCATAAAAAC CACTGGATTG 
    GTCGATCCCA TAATTAAACC AGAAGTTGCA GTAAAGGTTC TTTCAGTCTT GACCCACAAT 
    ATCTCAAGCA CCAAATATGA TACTGGGAAG AATCATGGGC TAAGTGTTTT GGACACATTG 
    CCAAATACAA TTAAAGAGGA GCTGCTATAT ATTTTGGTTT CGTTTCTTAT GTTCATGTGG 
    AAACTTGCCT TCAGCACTGG ACGTCTCTTC AGGAGTTATT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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