ORF » Species Summary » Populus trichocarpa » LOC7458972 cDNA ORF clone

LOC7458972 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7458972 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7458972 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa35346 XM_002324205.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0018s00911g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa447842 XM_024590340.1
Latest version!		 Populus trichocarpa putative CCR4-associated factor 1 homolog 8 (LOC7458972), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7458972 ( XM_002324205.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002324241.2 Populus trichocarpa hypothetical protein (POPTR_0018s00911g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa35346
    Clone ID Related Accession (Same CDS sequence) XM_002324205.2
    Accession Version XM_002324205.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 918bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008484). On Dec 16, 2013 this sequence version replaced XM_002324205.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCTGCTG CAGCTGCGGT TGCCGCGAAA ATCACTGCGG TGTGGAGACA AAATTTTAAG 
    CGAGAGATTT TCAGATTGGA CGCTGCCCTG TTCAGATTTC CAGTTGTCTC TTTTGATACA 
    GAGTTTCCTG GTTTCTTTCG AAACACTCCG ATAGACGCCA CTGACTTGAC TCGTTACGAG 
    GATTTGAAGC ATAATGTTGA TCCATTAAGG TTAATCCAAT TTGGTATCAC CGTTGCAGAT 
    GCAAGTGGCA AAATCGGGGG CACTTGGGAG TTTAATTTGC GGTTCGATCT GTCAAAGGAT 
    TTGTTTGTCT CTCAGTCTAT ACAATTCTTG CAAGACAATG GCATCGATTT TGACAAGCTG 
    AGAAGAGATG GGATTGATTT CGACATGTTC GCACAGTTGT TGTCACGTGT TGTTGCCAAG 
    CATCGAAACC TTTGTTGGGT TACCTTCCAT GGCTTGTATG ATCTGTCACA CACATTGAGG 
    ACAGTGACAA ACAGGCCATT GCCCCATTCT TTGGCTGGTT TTACGTCTCT ACTTGGTATT 
    GTGTTCGGTG ACGTGGTGGA TATCAAATAC ACGGCACGCT TTTGCCAGGG ATTACGTGGT 
    GGCGAGTTAG GCTTGGCAGC CATTGCTAAA ATCTTGAACG TGGAAAGAGT TGGTGGGGCA 
    CATCAAGCAG GATCCGATTC GTTGTTGACG GCTCGTGTGT ACACAAAGAT GAGGATGGTA 
    TACAAAATTG ATGGCACTCT TTGTGTGGGC TGCTTGTATG GTGTCTCAGC TAGAATTTGC 
    AAGCCGATTG CTGTGCCTAA TACCAATGGC CGCTGCTTTA TTCCATTTCT ATGTATAAAC 
    TTCCCAGTTC ATGTGCAACT GCATAAGCCC AACAACTTTG TTGATCACTT CCAACCGTCT 
    GCATCATCCT ACAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002324241.2
    CDS1..918
    Translation

    Target ORF information:

    RefSeq Version XM_002324205.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0018s00911g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002324205.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCTGCTG CAGCTGCGGT TGCCGCGAAA ATCACTGCGG TGTGGAGACA AAATTTTAAG 
    CGAGAGATTT TCAGATTGGA CGCTGCCCTG TTCAGATTTC CAGTTGTCTC TTTTGATACA 
    GAGTTTCCTG GTTTCTTTCG AAACACTCCG ATAGACGCCA CTGACTTGAC TCGTTACGAG 
    GATTTGAAGC ATAATGTTGA TCCATTAAGG TTAATCCAAT TTGGTATCAC CGTTGCAGAT 
    GCAAGTGGCA AAATCGGGGG CACTTGGGAG TTTAATTTGC GGTTCGATCT GTCAAAGGAT 
    TTGTTTGTCT CTCAGTCTAT ACAATTCTTG CAAGACAATG GCATCGATTT TGACAAGCTG 
    AGAAGAGATG GGATTGATTT CGACATGTTC GCACAGTTGT TGTCACGTGT TGTTGCCAAG 
    CATCGAAACC TTTGTTGGGT TACCTTCCAT GGCTTGTATG ATCTGTCACA CACATTGAGG 
    ACAGTGACAA ACAGGCCATT GCCCCATTCT TTGGCTGGTT TTACGTCTCT ACTTGGTATT 
    GTGTTCGGTG ACGTGGTGGA TATCAAATAC ACGGCACGCT TTTGCCAGGG ATTACGTGGT 
    GGCGAGTTAG GCTTGGCAGC CATTGCTAAA ATCTTGAACG TGGAAAGAGT TGGTGGGGCA 
    CATCAAGCAG GATCCGATTC GTTGTTGACG GCTCGTGTGT ACACAAAGAT GAGGATGGTA 
    TACAAAATTG ATGGCACTCT TTGTGTGGGC TGCTTGTATG GTGTCTCAGC TAGAATTTGC 
    AAGCCGATTG CTGTGCCTAA TACCAATGGC CGCTGCTTTA TTCCATTTCT ATGTATAAAC 
    TTCCCAGTTC ATGTGCAACT GCATAAGCCC AACAACTTTG TTGATCACTT CCAACCGTCT 
    GCATCATCCT ACAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7458972 ( XM_024590340.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024446108.1 Populus trichocarpa putative CCR4-associated factor 1 homolog 8 (LOC7458972), mRNA.
    Price & Availability↑
    CloneID OPa447842
    Clone ID Related Accession (Same CDS sequence) XM_024590340.1
    Accession Version XM_024590340.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 918bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product putative CCR4-associated factor 1 homolog 8
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037302.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCTGCTG CAGCTGCGGT TGCCGCGAAA ATCACTGCGG TGTGGAGACA AAATTTTAAG 
    CGAGAGATTT TCAGATTGGA CGCTGCCCTG TTCAGATTTC CAGTTGTCTC TTTTGATACA 
    GAGTTTCCTG GTTTCTTTCG AAACACTCCG ATGGACGCCA CTGACTTGAC TCGTTACGAG 
    GATTTGAAGC ATAATGTTGA TCCATTAAGG TTAATCCAAT TTGGTATCAC CGTTGCAGAT 
    GCAAGTGGCA AAATCGGGGG CACTTGGGAG TTTAATTTGC GGTTCGATCT GTCAAAGGAT 
    TTGTTTGTCT CTCAGTCTAT ACAATTCTTG CAAGACAATG GCATCGATTT TGACAAGCTG 
    AGAAGAGATG GGATTGATTT CGACATGTTC GCACAGTTGT TGTCACGTGT TGTTGCCAAG 
    CATCGAAACC TTTGTTGGGT TACCTTCCAT GGCTTGTATG ATCTGTCACA CACATTGAGG 
    ACAGTGACAA ACAGGCCATT GCCCCATTCT TTGGCTGGTT TTACGTCTCT ACTTGGTATT 
    GTGTTCGGTG ACGTGGTGGA TATCAAATAC ACGGCACGCT TTTGCCAGGG ATTACGTGGT 
    GGCGAGTTAG GCTTGGCAGC CATTGCTAAA ATCTTGAACG TGGAAAGAGT TGGTGGGGCA 
    CATCAAGCAG GATCCGATTC GTTGTTGACG GCTCGTGTGT ACACAAAGAT GAGGATGGTA 
    TACAAAATTG ATGGCACTCT TTGTGTGGGC TGCTTGTATG GTGTCTCAGC TAGAATTTGC 
    AAGCCGATTG CTGTGCCTAA TACCAATGGC CGCTGCTTTA TTCCGTACTT CAGCACTCCA 
    GCACCGTTCC AGCGTTGCAT TCCTCCCCAT TGTTCTGGTT TCATGCAAGC TGCTCCAACT 
    TTTAGTCATG TCCTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024446108.1
    CDS1..918
    Translation

    Target ORF information:

    RefSeq Version XM_024590340.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa putative CCR4-associated factor 1 homolog 8 (LOC7458972), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024590340.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCTGCTG CAGCTGCGGT TGCCGCGAAA ATCACTGCGG TGTGGAGACA AAATTTTAAG 
    CGAGAGATTT TCAGATTGGA CGCTGCCCTG TTCAGATTTC CAGTTGTCTC TTTTGATACA 
    GAGTTTCCTG GTTTCTTTCG AAACACTCCG ATGGACGCCA CTGACTTGAC TCGTTACGAG 
    GATTTGAAGC ATAATGTTGA TCCATTAAGG TTAATCCAAT TTGGTATCAC CGTTGCAGAT 
    GCAAGTGGCA AAATCGGGGG CACTTGGGAG TTTAATTTGC GGTTCGATCT GTCAAAGGAT 
    TTGTTTGTCT CTCAGTCTAT ACAATTCTTG CAAGACAATG GCATCGATTT TGACAAGCTG 
    AGAAGAGATG GGATTGATTT CGACATGTTC GCACAGTTGT TGTCACGTGT TGTTGCCAAG 
    CATCGAAACC TTTGTTGGGT TACCTTCCAT GGCTTGTATG ATCTGTCACA CACATTGAGG 
    ACAGTGACAA ACAGGCCATT GCCCCATTCT TTGGCTGGTT TTACGTCTCT ACTTGGTATT 
    GTGTTCGGTG ACGTGGTGGA TATCAAATAC ACGGCACGCT TTTGCCAGGG ATTACGTGGT 
    GGCGAGTTAG GCTTGGCAGC CATTGCTAAA ATCTTGAACG TGGAAAGAGT TGGTGGGGCA 
    CATCAAGCAG GATCCGATTC GTTGTTGACG GCTCGTGTGT ACACAAAGAT GAGGATGGTA 
    TACAAAATTG ATGGCACTCT TTGTGTGGGC TGCTTGTATG GTGTCTCAGC TAGAATTTGC 
    AAGCCGATTG CTGTGCCTAA TACCAATGGC CGCTGCTTTA TTCCGTACTT CAGCACTCCA 
    GCACCGTTCC AGCGTTGCAT TCCTCCCCAT TGTTCTGGTT TCATGCAAGC TGCTCCAACT 
    TTTAGTCATG TCCTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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