ORF » Species Summary » Populus trichocarpa » LOC18108779 cDNA ORF clone

LOC18108779 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18108779 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18108779 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa418876 XM_024592169.1
Latest version!		 Populus trichocarpa squalene monooxygenase (LOC18108779), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18108779 ( XM_024592169.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024447937.1 Populus trichocarpa squalene monooxygenase (LOC18108779), mRNA.
    Price & Availability↑
    CloneID OPa418876
    Clone ID Related Accession (Same CDS sequence) XM_024592169.1
    Accession Version XM_024592169.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1404bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product squalene monooxygenase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020167879.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 3% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGACTCCA AACATATATT TGGAGGAGTT GTAGCAGCTT TCTTGTTCGG GTTTGTTGTA 
    CTCTACAGTT CAAGAAGGAG AGAGAATATC AAAGCTTCAG AGAAAAATCG AAGCAAGAAA 
    AGTTTGAAAA GCTCTGGAAA TGGAGTGTGC AGATCAAATT TTGCTGGAAA TACTGATGTG 
    ATCATCGTAG GTGCTGGTGT TGCTGGTTCA GCTCTTGCTT ATGCTCTCGC AAAGGATGGA 
    TGGCGCGTGC AAGTTATTGA AAGAGACTTG GCTGAGCCCG ACAGAATTGT TGGTGAGGTC 
    CTGCATGCTG GGGGCTGCAT TAAATTGGCC GAGTTAGGTC TTCAAGACTG TCTAGATGGG 
    ATTGATTCTC AGATAGTCTT CAGTTTCGCT GCTGTTCACA AAGATGGGAA AAGAACTGCA 
    ATTTCATATC CCGCCAATGC GAGTGGCAGA GGCTTTCACA ATGGCCGCTT CATCCAGAAA 
    CTACGTGAAA AAGCCGCATC TCTTCCCAAT GTTAAACTCG ATCAAGGAAC TGTAACATCT 
    CTTGTCGAAG AAAATGGAAC TATCAAAGGT GTGCTATACA AAACAAAGGC AGGCCAGGAG 
    TTAGTAGCTT CAGCTTCACT CACAATAGTA TGTGATGGTT GTTTTTCAAA TTTACGACGC 
    AATCTCTGCA ATCCAAAGAT TGAAGTCCCA TCTTACTTTG TTGGTTTGGT CCTGGAGAAT 
    TATAATCTTC CATATGCAAA TCGGGCATAC TTTATTTTGA AGGATACAAT TGTCATAGCT 
    TATCCAATTA GCAGCAATGA AATTCGTTGT TTAGTTGATG TACCTGGCTC GAAACAACCA 
    CCTATTTCCA ATGGCGAAAT GGCAAGCTAC TTGAAAACAG TGGTGGCACC TCAAATGCCA 
    CCTGAGCTAT ACAATGCTTT CATATGTGCA ATTGATAAGG GCAACATAAG AACAATGCCA 
    AACAGAATCA TGCCTGCGTC TCCCTATCCA ACCCCTGGTG CATTTCTAAT AGGGGATTCG 
    TTGAATATGC GCCATGCTGT AACTGGAGGA GGAATGACCG TGGGACTTTC TGATGTTGTT 
    CTACTGCGAG ATCTTCTTAG GCCTCTGAAT GATCTTAGTG ATGGAGCTTC CATTTGCAAA 
    TATCTTGAAT CCTTTTACAT TCTGCGTAAG CCAACGGCAT TTGCAATAAA CACATTGGCA 
    AGCACCCTAC ACACAGTATT CTCTTCATCG GATCAGGATC CATCAAGGAA GGAAATGAAA 
    GAAGCATTCT TCAATTATTT GAGCCTTGGA GGCGTGTTCT CAGAAGGACT GATGGCTCTT 
    CTGTCTGGTC TAAACCCTGA CCCGTTGAGC TTGAGGAAAG GGTGCAGAAA GCGATCACAA 
    ACCAACCAGA TGCAAGCAGA CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024447937.1
    CDS440..1843
    Translation

    Target ORF information:

    RefSeq Version XM_024592169.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa squalene monooxygenase (LOC18108779), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024592169.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGACTCCA AACATATATT TGGAGGAGTT GTAGCAGCTT TCTTGTTCGG GTTTGTTGTA 
    CTCTACAGTT CAAGAAGGAG AGAGAATATC AAAGCTTCAG AGAAAAATCG AAGCAAGAAA 
    AGTTTGAAAA GCTCTGGAAA TGGAGTGTGC AGATCAAATT TTGCTGGAAA TACTGATGTG 
    ATCATCGTAG GTGCTGGTGT TGCTGGTTCA GCTCTTGCTT ATGCTCTCGC AAAGGATGGA 
    TGGCGCGTGC AAGTTATTGA AAGAGACTTG GCTGAGCCCG ACAGAATTGT TGGTGAGGTC 
    CTGCATGCTG GGGGCTGCAT TAAATTGGCC GAGTTAGGTC TTCAAGACTG TCTAGATGGG 
    ATTGATTCTC AGATAGTCTT CAGTTTCGCT GCTGTTCACA AAGATGGGAA AAGAACTGCA 
    ATTTCATATC CCGCCAATGC GAGTGGCAGA GGCTTTCACA ATGGCCGCTT CATCCAGAAA 
    CTACGTGAAA AAGCCGCATC TCTTCCCAAT GTTAAACTCG ATCAAGGAAC TGTAACATCT 
    CTTGTCGAAG AAAATGGAAC TATCAAAGGT GTGCTATACA AAACAAAGGC AGGCCAGGAG 
    TTAGTAGCTT CAGCTTCACT CACAATAGTA TGTGATGGTT GTTTTTCAAA TTTACGACGC 
    AATCTCTGCA ATCCAAAGAT TGAAGTCCCA TCTTACTTTG TTGGTTTGGT CCTGGAGAAT 
    TATAATCTTC CATATGCAAA TCGGGCATAC TTTATTTTGA AGGATACAAT TGTCATAGCT 
    TATCCAATTA GCAGCAATGA AATTCGTTGT TTAGTTGATG TACCTGGCTC GAAACAACCA 
    CCTATTTCCA ATGGCGAAAT GGCAAGCTAC TTGAAAACAG TGGTGGCACC TCAAATGCCA 
    CCTGAGCTAT ACAATGCTTT CATATGTGCA ATTGATAAGG GCAACATAAG AACAATGCCA 
    AACAGAATCA TGCCTGCGTC TCCCTATCCA ACCCCTGGTG CATTTCTAAT AGGGGATTCG 
    TTGAATATGC GCCATGCTGT AACTGGAGGA GGAATGACCG TGGGACTTTC TGATGTTGTT 
    CTACTGCGAG ATCTTCTTAG GCCTCTGAAT GATCTTAGTG ATGGAGCTTC CATTTGCAAA 
    TATCTTGAAT CCTTTTACAT TCTGCGTAAG CCAACGGCAT TTGCAATAAA CACATTGGCA 
    AGCACCCTAC ACACAGTATT CTCTTCATCG GATCAGGATC CATCAAGGAA GGAAATGAAA 
    GAAGCATTCT TCAATTATTT GAGCCTTGGA GGCGTGTTCT CAGAAGGACT GATGGCTCTT 
    CTGTCTGGTC TAAACCCTGA CCCGTTGAGC TTGAGGAAAG GGTGCAGAAA GCGATCACAA 
    ACCAACCAGA TGCAAGCAGA CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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