ORF » Species Summary » Populus trichocarpa » LOC18104210 cDNA ORF clone

LOC18104210 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18104210 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18104210 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa28622 XM_006375961.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0013s08080g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa441217 XM_024582972.1
Latest version!		 Populus trichocarpa uroporphyrinogen decarboxylase, chloroplastic (LOC18104210), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18104210 ( XM_006375961.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006376023.1 Populus trichocarpa hypothetical protein (POPTR_0013s08080g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa28622
    Clone ID Related Accession (Same CDS sequence) XM_006375961.1
    Accession Version XM_006375961.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 711bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGCCTAATT TTTTGTTGAT TCTCAGGGTC GTATTCTGTG AGCCCACTAG CAGATCATGT 
    CTAGTTTCAC TTAACGAAGA GGTAGAAAAC AAAGCTGCAG GGCTGGGCTT TGTAGGGGCT 
    CCTTTGACCC TTGCTTCATA TGTAGTGGAA GGTGGTTCGT CAAAGCACTT TACCAAAGTA 
    AAGAGATTAG CTTTCTCCCA GCCCAAGATT CCCCACGAAT TACTTCAGAC CTCTATGGCA 
    AAATACATTC AATATCAAGC TGACAGTGGA GCTCAAACTG TTCAAATCTT TGCCTCGTGG 
    GCCACAGAAC TTAGCCCTGT GGATTTTGAG GAGTTTAGTC TTCCATACTT GAAGCAGATT 
    GTGGACACTG TGAATCAATC CCATCCAAAT CTCCCACTAA TCCTTCATGC CAGCGGATCT 
    GGAGGCTTGC TTGAGCGGCT AGCTTTGACA GATGTAGATG TTGTTAGCAT GGATTGGTCA 
    GTTGATATGG CTGAAGGTAG GAGGCGACTG GGGCCTGATG TAGCAGTTCA GGGAAATGTA 
    GATCCTGGTG TTTTATTTCG GTCAAAGGAA TTCATAACTA ATCGAATCAA TGATGTCGTC 
    AGAAAAGCCG GTAAAGGAAA ACATATACTG AATCTTGGTC ATGGAATTGT AGTAGGCACA 
    CCTGAGGAGA ATGTTGCTCA TTTTCTTGAG GTTGCTAAAA GAATCAGATA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006376023.1
    CDS1..711
    Translation

    Target ORF information:

    RefSeq Version XM_006375961.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0013s08080g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006375961.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGCCTAATT TTTTGTTGAT TCTCAGGGTC GTATTCTGTG AGCCCACTAG CAGATCATGT 
    CTAGTTTCAC TTAACGAAGA GGTAGAAAAC AAAGCTGCAG GGCTGGGCTT TGTAGGGGCT 
    CCTTTGACCC TTGCTTCATA TGTAGTGGAA GGTGGTTCGT CAAAGCACTT TACCAAAGTA 
    AAGAGATTAG CTTTCTCCCA GCCCAAGATT CCCCACGAAT TACTTCAGAC CTCTATGGCA 
    AAATACATTC AATATCAAGC TGACAGTGGA GCTCAAACTG TTCAAATCTT TGCCTCGTGG 
    GCCACAGAAC TTAGCCCTGT GGATTTTGAG GAGTTTAGTC TTCCATACTT GAAGCAGATT 
    GTGGACACTG TGAATCAATC CCATCCAAAT CTCCCACTAA TCCTTCATGC CAGCGGATCT 
    GGAGGCTTGC TTGAGCGGCT AGCTTTGACA GATGTAGATG TTGTTAGCAT GGATTGGTCA 
    GTTGATATGG CTGAAGGTAG GAGGCGACTG GGGCCTGATG TAGCAGTTCA GGGAAATGTA 
    GATCCTGGTG TTTTATTTCG GTCAAAGGAA TTCATAACTA ATCGAATCAA TGATGTCGTC 
    AGAAAAGCCG GTAAAGGAAA ACATATACTG AATCTTGGTC ATGGAATTGT AGTAGGCACA 
    CCTGAGGAGA ATGTTGCTCA TTTTCTTGAG GTTGCTAAAA GAATCAGATA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18104210 ( XM_024582972.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024438740.1 Populus trichocarpa uroporphyrinogen decarboxylase, chloroplastic (LOC18104210), mRNA.
    Price & Availability↑
    CloneID OPa441217
    Clone ID Related Accession (Same CDS sequence) XM_024582972.1
    Accession Version XM_024582972.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 477bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uroporphyrinogen decarboxylase, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    ATGGCAAAAT ACATTCAATA TCAAGCTGAC AGTGGAGCTC AAACTGTTCA AATCTTTGCC 
    TCGTGGGCCA CAGAACTTAG CCCTGTGGAT TTTGAGGAGT TTAGTCTTCC ATACTTGAAG 
    CAGATTGTGG ACACTGTGAA TCAATCCCAT CCAAATCTCC CACTAATCCT TCATGCCAGC 
    GGATCTGGAG GCTTGCTTGA GCGGCTAGCT TTGACAGATG TAGATGTTGT TAGCATGGAT 
    TGGTCAGTTG ATATGGCTGA AGGTAGGAGG CGACTGGGGC CTGATGTAGC AGTTCAGGGA 
    AATGTAGATC CTGGTGTTTT ATTTCGGTCA AAGGAATTCA TAACTAATCG AATCAATGAT 
    GTCGTCAGAA AAGCCGGTAA AGGAAAACAT ATACTGAATC TTGGTCATGG AATTGTAGTA 
    GGCACACCTG AGGAGAATGT TGCTCATTTT CTTGAGGTTG CTAAAAGAAT CAGATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024438740.1
    CDS1159..1635
    Translation

    Target ORF information:

    RefSeq Version XM_024582972.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uroporphyrinogen decarboxylase, chloroplastic (LOC18104210), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024582972.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    ATGGCAAAAT ACATTCAATA TCAAGCTGAC AGTGGAGCTC AAACTGTTCA AATCTTTGCC 
    TCGTGGGCCA CAGAACTTAG CCCTGTGGAT TTTGAGGAGT TTAGTCTTCC ATACTTGAAG 
    CAGATTGTGG ACACTGTGAA TCAATCCCAT CCAAATCTCC CACTAATCCT TCATGCCAGC 
    GGATCTGGAG GCTTGCTTGA GCGGCTAGCT TTGACAGATG TAGATGTTGT TAGCATGGAT 
    TGGTCAGTTG ATATGGCTGA AGGTAGGAGG CGACTGGGGC CTGATGTAGC AGTTCAGGGA 
    AATGTAGATC CTGGTGTTTT ATTTCGGTCA AAGGAATTCA TAACTAATCG AATCAATGAT 
    GTCGTCAGAA AAGCCGGTAA AGGAAAACAT ATACTGAATC TTGGTCATGG AATTGTAGTA 
    GGCACACCTG AGGAGAATGT TGCTCATTTT CTTGAGGTTG CTAAAAGAAT CAGATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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