ORF » Species Summary » Populus trichocarpa » LOC18102495 cDNA ORF clone

LOC18102495 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18102495 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18102495 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa24449 XM_006378304.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0010s08990g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa438105 XM_006378304.2
Latest version!		 Populus trichocarpa 3-ketoacyl-CoA synthase 20 (LOC18102495), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18102495 ( XM_006378304.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006378366.1 Populus trichocarpa hypothetical protein (POPTR_0010s08990g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa24449
    Clone ID Related Accession (Same CDS sequence) XM_006378304.1
    Accession Version XM_006378304.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1575bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAGAGG ATCAGAGCAA ACAAAGACTG GGACCAGAAT CAGTCACGGT TCATGATAGT 
    GAACCAGCTG AAACGAAGAG AAACACCCTC CCAAACTTTC TTCTATCAGT TAAACTCAAA 
    TATGTGAAAC TTGGTTATCA TTACTTAATA TCCAATGCCA TGTTTCTCCT GCTTATTCCA 
    CTCCTATTCA TTGCATCAGC TCATCTTTCA ACTCTTACCA TCCAAGATTT CGTCCAGCTT 
    TGGAACCACC TCAAATTCAA TTTTGTCTCA GTAACTGTTA GCTCAGGCCT TCTAGTTTTC 
    TTGGCTACTC TTTACTTCAC CAGCCGTCCT AGAAAAATAT ACTTGTTGGA TTTTGCATGT 
    TACAAGCCCG AACCCGCTCG AATGTGCACC AGAGAGACTT TCATGGAGAC ATCAACACTA 
    GCAGGCAGCT GCAGTGAAGA GAACTTAGCC TTTCAAAAGA AGATTATTGA GAGGTCTGGT 
    TTAGGACAAA ATACTTACTT CCCTGAGGCA GTGATGCGGA TCACACCAAG GCCGGGCATG 
    GAGGACGCAA GGAAGGAGGC TGAGATGGTG ATGTTTGGAG CCATTGATGA GCTCTTGGCC 
    AAAACTGGGG TTAAAGCTAA GGATATAGGC ATTCTTATAG TGAATTGCAG TTTGTTCAAT 
    CCAACCCCGT CTCTCTCTGC CATGGTAGTC AATCACTACA GACTCAGGGG GAACATATTG 
    AGCTATAATC TTGGTGGTAT GGGTTGCAGT GCGGGGCTCA TCTCTATTGA TCTTGCCAAG 
    CAGCTACTGC AGGTGCATCC CAATTCCTAT GCTCTAGTGA TCAGTATGGA GAACATCACT 
    CTTAATCGGT ACTTTGGCAA TGACCGGTCC ATGCTTGTCT CCAACTGCTT ATTCCGTATG 
    GGTGGTGCTG CAATCCTTCT CTCCAACCGA TCATCCGATC GCCGCCGCTC AAAGTATCAA 
    CTAATCCACA CTGTTCGAAC ACACAAGGGG GCTGATGATA AGTGTTACAA TTGTGTGTTC 
    CAAAAAGAGG ATAACACCAG AAGAGTTGGT GTTTCGCTTT CTAAGGACCT CATGGCTGTT 
    GCTGGAGAAG CCCTTAAAAC CAATATCACA ACACTAGGGC CGTTAGTCCT TCCCATGTCA 
    GAGCAACTCC TATTTTTTGC TACTTTAGTA GGAAGAAAGA TCTTCAAAAT GAAGATAAAA 
    CCGTACATTC CTGATTTCAA GTTGGCTTTT GAGCACTTCT GCATCCATGC TGGTGGGAGA 
    GCTGTGTTAG ATGAACTAGA GAAAAATCTG GAGCTCTCTG ACTGGCACAT GGAGCCTTCA 
    AGAATGACTC TTTATAGGTT CGGTAACACT TCTAGTAGCT CTTTGTGGTA TGAATTGGCT 
    TACTCCGAGG CCAAAGGGAG AATTAGGAAG GGTGATAGAA CTTGGCAGAT TGCTTTCGGT 
    TCAGGATTCA AGTGTAACAG TGCGGTGTGG CATGCATTGA GGACAATCAA TCCGGCAAAA 
    GAGAAGAATC CTTGGGTTGA TGAAATTGAT GAATTCCCTG TTCATGTGCC TAAAGTGGTG 
    CCCATCGCCT CTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006378366.1
    CDS1..1575
    Translation

    Target ORF information:

    RefSeq Version XM_006378304.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0010s08990g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006378304.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAGAGG ATCAGAGCAA ACAAAGACTG GGACCAGAAT CAGTCACGGT TCATGATAGT 
    GAACCAGCTG AAACGAAGAG AAACACCCTC CCAAACTTTC TTCTATCAGT TAAACTCAAA 
    TATGTGAAAC TTGGTTATCA TTACTTAATA TCCAATGCCA TGTTTCTCCT GCTTATTCCA 
    CTCCTATTCA TTGCATCAGC TCATCTTTCA ACTCTTACCA TCCAAGATTT CGTCCAGCTT 
    TGGAACCACC TCAAATTCAA TTTTGTCTCA GTAACTGTTA GCTCAGGCCT TCTAGTTTTC 
    TTGGCTACTC TTTACTTCAC CAGCCGTCCT AGAAAAATAT ACTTGTTGGA TTTTGCATGT 
    TACAAGCCCG AACCCGCTCG AATGTGCACC AGAGAGACTT TCATGGAGAC ATCAACACTA 
    GCAGGCAGCT GCAGTGAAGA GAACTTAGCC TTTCAAAAGA AGATTATTGA GAGGTCTGGT 
    TTAGGACAAA ATACTTACTT CCCTGAGGCA GTGATGCGGA TCACACCAAG GCCGGGCATG 
    GAGGACGCAA GGAAGGAGGC TGAGATGGTG ATGTTTGGAG CCATTGATGA GCTCTTGGCC 
    AAAACTGGGG TTAAAGCTAA GGATATAGGC ATTCTTATAG TGAATTGCAG TTTGTTCAAT 
    CCAACCCCGT CTCTCTCTGC CATGGTAGTC AATCACTACA GACTCAGGGG GAACATATTG 
    AGCTATAATC TTGGTGGTAT GGGTTGCAGT GCGGGGCTCA TCTCTATTGA TCTTGCCAAG 
    CAGCTACTGC AGGTGCATCC CAATTCCTAT GCTCTAGTGA TCAGTATGGA GAACATCACT 
    CTTAATCGGT ACTTTGGCAA TGACCGGTCC ATGCTTGTCT CCAACTGCTT ATTCCGTATG 
    GGTGGTGCTG CAATCCTTCT CTCCAACCGA TCATCCGATC GCCGCCGCTC AAAGTATCAA 
    CTAATCCACA CTGTTCGAAC ACACAAGGGG GCTGATGATA AGTGTTACAA TTGTGTGTTC 
    CAAAAAGAGG ATAACACCAG AAGAGTTGGT GTTTCGCTTT CTAAGGACCT CATGGCTGTT 
    GCTGGAGAAG CCCTTAAAAC CAATATCACA ACACTAGGGC CGTTAGTCCT TCCCATGTCA 
    GAGCAACTCC TATTTTTTGC TACTTTAGTA GGAAGAAAGA TCTTCAAAAT GAAGATAAAA 
    CCGTACATTC CTGATTTCAA GTTGGCTTTT GAGCACTTCT GCATCCATGC TGGTGGGAGA 
    GCTGTGTTAG ATGAACTAGA GAAAAATCTG GAGCTCTCTG ACTGGCACAT GGAGCCTTCA 
    AGAATGACTC TTTATAGGTT CGGTAACACT TCTAGTAGCT CTTTGTGGTA TGAATTGGCT 
    TACTCCGAGG CCAAAGGGAG AATTAGGAAG GGTGATAGAA CTTGGCAGAT TGCTTTCGGT 
    TCAGGATTCA AGTGTAACAG TGCGGTGTGG CATGCATTGA GGACAATCAA TCCGGCAAAA 
    GAGAAGAATC CTTGGGTTGA TGAAATTGAT GAATTCCCTG TTCATGTGCC TAAAGTGGTG 
    CCCATCGCCT CTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18102495 ( XM_006378304.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006378366.2 Populus trichocarpa 3-ketoacyl-CoA synthase 20 (LOC18102495), mRNA.
    Price & Availability↑
    CloneID OPa438105
    Clone ID Related Accession (Same CDS sequence) XM_006378304.2
    Accession Version XM_006378304.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1575bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 3-ketoacyl-CoA synthase 20
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006378304.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAGAGG ATCAGAGCAA ACAAAGACTG GGACCAGAAT CAGTCACGGT TCATGATAGT 
    GAACCAGCTG AAACGAAGAG AAACACCCTC CCAAACTTTC TTCTATCAGT TAAACTCAAA 
    TATGTGAAAC TTGGTTATCA TTACTTAATA TCCAATGCCA TGTTTCTCCT GCTTATTCCA 
    CTCCTATTCA TTGCATCAGC TCATCTTTCA ACTCTTACCA TCCAAGATTT CGTCCAGCTT 
    TGGAACCACC TCAAATTCAA TTTTGTCTCA GTAACTGTTA GCTCAGGCCT TCTAGTTTTC 
    TTGGCTACTC TTTACTTCAC CAGCCGTCCT AGAAAAATAT ACTTGTTGGA TTTTGCATGT 
    TACAAGCCCG AACCCGCTCG AATGTGCACC AGAGAGACTT TCATGGAGAA ATCAGTACTA 
    GCAGGCAGCT TCAGTGAAGA GAACTTAGCC TTTCAAAAGA AGATTATTGA GAGGTCTGGT 
    TTAGGACAAA ATACTTACTT CCCTGAGGCA GTGATGCGGA TCACACCAAG GCCGGGCATG 
    GAGGACGCAA GGAAGGAGGC TGAGATGGTG ATGTTTGGAG CCATTGATGA GCTCTTGGCC 
    AAAACTGGGG TTAAAGCTAA GGATATAGGC ATTCTTATAG TGAATTGCAG TTTGTTCAAT 
    CCAACCCCGT CTCTCTCTGC CATGGTAGTC AATCACTACA GACTCAGGGG GAACATATTG 
    AGCTATAATC TTGGTGGTAT GGGTTGCAGT GCGGGGCTCA TCTCTATTGA TCTTGCCAAG 
    CAGCTACTGC AGGTGCATCC CAATTCCTAT GCTCTAGTGA TCAGTATGGA GAACATCACT 
    CTTAATTGTT ACTTTGGTAA TGACCGGTCC ATGCTTGTCT CCAACTGCTT ATTCCGTATG 
    GGTGGTGCTG CAATCCTTCT CTCCAACCGA TCATCCGATC GCCGCCGCTC AAAGTATCAA 
    CTAATCCACA CTGTTCGAAC ACACAAGGGG GCTGATGATA AGTGTTACAA TTGTGTGTTC 
    CAAAAAGAGG ATAACACCAG AAGAGTTGGT GTTTCGCTTT CTAAGGACCT CATGGCTGTT 
    GCTGGAGAAG CCCTTAAAAC CAATATCACA ACACTAGGGC CGTTAGTCCT TCCCATGTCA 
    GAGCAACTCC TATTTTTTGC TACTTTAGTA GGAAGAAAGA TCTTCAAAAT GAAGATAAAA 
    CCGTACATTC CTGATTTCAA GTTGGCTTTT GAGCACTTCT GCATCCATGC TGGTGGGAGA 
    GCTGTGTTAG ATGAACTAGA GAAAAATCTG GAGCTCTCTG ACTGGCACAT GGAGCCTTCA 
    AGAATGACTC TTTATAGGTT CGGTAACACT TCTAGTAGCT CTTTGTGGTA TGAATTGGCT 
    TACTCCGAGG CCAAAGGGAG AATTAGGAAG GGTGATAGAA CTTGGCAGAT TGCTTTCGGT 
    TCAGGATTCA AGTGTAACAG TGCGGTGTGG CATGCATTGA GGACAATCAA TCCGGCAAAA 
    GAGAAGAATC CTTGGGTTGA TGAAATTGAT GAATTCCCTG TTCATGTGCC TAAAGTGGTG 
    CCCATCGCCT CTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006378366.2
    CDS169..1743
    Translation

    Target ORF information:

    RefSeq Version XM_006378304.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 3-ketoacyl-CoA synthase 20 (LOC18102495), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006378304.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAGAGG ATCAGAGCAA ACAAAGACTG GGACCAGAAT CAGTCACGGT TCATGATAGT 
    GAACCAGCTG AAACGAAGAG AAACACCCTC CCAAACTTTC TTCTATCAGT TAAACTCAAA 
    TATGTGAAAC TTGGTTATCA TTACTTAATA TCCAATGCCA TGTTTCTCCT GCTTATTCCA 
    CTCCTATTCA TTGCATCAGC TCATCTTTCA ACTCTTACCA TCCAAGATTT CGTCCAGCTT 
    TGGAACCACC TCAAATTCAA TTTTGTCTCA GTAACTGTTA GCTCAGGCCT TCTAGTTTTC 
    TTGGCTACTC TTTACTTCAC CAGCCGTCCT AGAAAAATAT ACTTGTTGGA TTTTGCATGT 
    TACAAGCCCG AACCCGCTCG AATGTGCACC AGAGAGACTT TCATGGAGAA ATCAGTACTA 
    GCAGGCAGCT TCAGTGAAGA GAACTTAGCC TTTCAAAAGA AGATTATTGA GAGGTCTGGT 
    TTAGGACAAA ATACTTACTT CCCTGAGGCA GTGATGCGGA TCACACCAAG GCCGGGCATG 
    GAGGACGCAA GGAAGGAGGC TGAGATGGTG ATGTTTGGAG CCATTGATGA GCTCTTGGCC 
    AAAACTGGGG TTAAAGCTAA GGATATAGGC ATTCTTATAG TGAATTGCAG TTTGTTCAAT 
    CCAACCCCGT CTCTCTCTGC CATGGTAGTC AATCACTACA GACTCAGGGG GAACATATTG 
    AGCTATAATC TTGGTGGTAT GGGTTGCAGT GCGGGGCTCA TCTCTATTGA TCTTGCCAAG 
    CAGCTACTGC AGGTGCATCC CAATTCCTAT GCTCTAGTGA TCAGTATGGA GAACATCACT 
    CTTAATTGTT ACTTTGGTAA TGACCGGTCC ATGCTTGTCT CCAACTGCTT ATTCCGTATG 
    GGTGGTGCTG CAATCCTTCT CTCCAACCGA TCATCCGATC GCCGCCGCTC AAAGTATCAA 
    CTAATCCACA CTGTTCGAAC ACACAAGGGG GCTGATGATA AGTGTTACAA TTGTGTGTTC 
    CAAAAAGAGG ATAACACCAG AAGAGTTGGT GTTTCGCTTT CTAAGGACCT CATGGCTGTT 
    GCTGGAGAAG CCCTTAAAAC CAATATCACA ACACTAGGGC CGTTAGTCCT TCCCATGTCA 
    GAGCAACTCC TATTTTTTGC TACTTTAGTA GGAAGAAAGA TCTTCAAAAT GAAGATAAAA 
    CCGTACATTC CTGATTTCAA GTTGGCTTTT GAGCACTTCT GCATCCATGC TGGTGGGAGA 
    GCTGTGTTAG ATGAACTAGA GAAAAATCTG GAGCTCTCTG ACTGGCACAT GGAGCCTTCA 
    AGAATGACTC TTTATAGGTT CGGTAACACT TCTAGTAGCT CTTTGTGGTA TGAATTGGCT 
    TACTCCGAGG CCAAAGGGAG AATTAGGAAG GGTGATAGAA CTTGGCAGAT TGCTTTCGGT 
    TCAGGATTCA AGTGTAACAG TGCGGTGTGG CATGCATTGA GGACAATCAA TCCGGCAAAA 
    GAGAAGAATC CTTGGGTTGA TGAAATTGAT GAATTCCCTG TTCATGTGCC TAAAGTGGTG 
    CCCATCGCCT CTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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