ORF » Species Summary » Populus trichocarpa » POPTR_0005s11790g cDNA ORF clone

POPTR_0005s11790g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0005s11790g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0005s11790g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa13684 XM_006383062.1
Latest version!		 Populus trichocarpa aminotransferase class 1 and 2 family protein (POPTR_0005s11790g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa429485 XM_006383062.2
Latest version!		 Populus trichocarpa probable LL-diaminopimelate aminotransferase, chloroplastic (LOC18099211), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0005s11790g ( XM_006383062.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006383124.1 Populus trichocarpa aminotransferase class 1 and 2 family protein (POPTR_0005s11790g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa13684
    Clone ID Related Accession (Same CDS sequence) XM_006383062.1
    Accession Version XM_006383062.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1194bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product aminotransferase class 1 and 2 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGGAGAAGT TACAGAGTGC CTATTTGTTT CCTGAGATCT CAATGCGTGA GGTTCAACAC 
    ATTGAGAAGT ACCCAGATGC AAAATTGATA AGCCTTGGAA TTGGTGACAC CACAGAGCCC 
    ATACCGGATA TCATAGCTTC AAGCATGGCA AACTATGCAC GTTCCCTTTC AACAGCAGAA 
    GGTTATAGTG GGTATGGAGC TGAGCAAGGC AACAAAGCCT TGAGGAAAGC TATTGCTGAA 
    ACATTTTACA GAGATGTTCG GGTAAAGGAA ACAGAAGTTT TTGTGTCAGA TGGCTCACAG 
    TGTGATATTA CTCGCCTTCA GCTGCTGTTT GGTTCCAATG TGTCAATAGC TGTGCAGGAT 
    CCATCCTTTC CAGCCTATGT AGATTCAAGT GTCATAATTG GTCAAGCTGG TGATTTTGAA 
    GATAAAACTG GGATGTATGG GAAAATTCAG TACATGAAAT GTCTGCCTAA AACTAACTTT 
    TTTCCCGACT TAGCAACAGC TTCAAGGTCA GATATAATTT TCTTTTGCTC TCCGAATAAT 
    CCCACTGGTC ATGCAGCAAC ACGACAGCAG TTGGAGCAAC TTGTGAAGTT TGCAAAGGAG 
    AATGGATCAA TCATAATTTT TGACTCTGCG TATGCAGCTT ATATCAGTGA TGATTCCCCT 
    CGATCTATCT TTGAAATTCC TGGGGCGAGA GAGGTTGCGA TTGAAGTTTC CTCTTTCTCT 
    AAATTTGCTG GGTTCACAGG CATTCGTCTT GGCTGGACAG TTGTTCCTGA AGAGCTGTCC 
    TTTTCAAATG GTTTTCCTGT AATAAATGAC TTCAATCGTA TTGTTTGCAC TTGCTTCAAT 
    GGAGCATCAA ATATAGCCCA GGCTGGTGGA CTGGCGTGTC TTTCCCCAGA GGGTTTTGCG 
    TCTGTGCATT CCATAATCAA ATGCTACAAG GAGAACGCAA AAATACTGCG TGACACCTTT 
    TCTTCTCTTG GTCTAAAAGT ATATGGTGGT GAAAATGCTC CTTACCTTTG GGTTCATTTT 
    CCTGGTTCAA AATCTTGGGA TATATTTACT GAGATTCTGG AGAAGACTCA TATAATAACT 
    GTTCCAGGTT CTGGATTTGG TCCAGAAGGC GAAGAGTTCA TGAGAATTAG TGCTTTTGGA 
    CACAAAGAGA GTATCATAGA AGCCGCAAGG AGGCTGGGAA ACCTTTATCC ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006383124.1
    CDS19..1212
    Translation

    Target ORF information:

    RefSeq Version XM_006383062.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa aminotransferase class 1 and 2 family protein (POPTR_0005s11790g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006383062.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGGAGAAGT TACAGAGTGC CTATTTGTTT CCTGAGATCT CAATGCGTGA GGTTCAACAC 
    ATTGAGAAGT ACCCAGATGC AAAATTGATA AGCCTTGGAA TTGGTGACAC CACAGAGCCC 
    ATACCGGATA TCATAGCTTC AAGCATGGCA AACTATGCAC GTTCCCTTTC AACAGCAGAA 
    GGTTATAGTG GGTATGGAGC TGAGCAAGGC AACAAAGCCT TGAGGAAAGC TATTGCTGAA 
    ACATTTTACA GAGATGTTCG GGTAAAGGAA ACAGAAGTTT TTGTGTCAGA TGGCTCACAG 
    TGTGATATTA CTCGCCTTCA GCTGCTGTTT GGTTCCAATG TGTCAATAGC TGTGCAGGAT 
    CCATCCTTTC CAGCCTATGT AGATTCAAGT GTCATAATTG GTCAAGCTGG TGATTTTGAA 
    GATAAAACTG GGATGTATGG GAAAATTCAG TACATGAAAT GTCTGCCTAA AACTAACTTT 
    TTTCCCGACT TAGCAACAGC TTCAAGGTCA GATATAATTT TCTTTTGCTC TCCGAATAAT 
    CCCACTGGTC ATGCAGCAAC ACGACAGCAG TTGGAGCAAC TTGTGAAGTT TGCAAAGGAG 
    AATGGATCAA TCATAATTTT TGACTCTGCG TATGCAGCTT ATATCAGTGA TGATTCCCCT 
    CGATCTATCT TTGAAATTCC TGGGGCGAGA GAGGTTGCGA TTGAAGTTTC CTCTTTCTCT 
    AAATTTGCTG GGTTCACAGG CATTCGTCTT GGCTGGACAG TTGTTCCTGA AGAGCTGTCC 
    TTTTCAAATG GTTTTCCTGT AATAAATGAC TTCAATCGTA TTGTTTGCAC TTGCTTCAAT 
    GGAGCATCAA ATATAGCCCA GGCTGGTGGA CTGGCGTGTC TTTCCCCAGA GGGTTTTGCG 
    TCTGTGCATT CCATAATCAA ATGCTACAAG GAGAACGCAA AAATACTGCG TGACACCTTT 
    TCTTCTCTTG GTCTAAAAGT ATATGGTGGT GAAAATGCTC CTTACCTTTG GGTTCATTTT 
    CCTGGTTCAA AATCTTGGGA TATATTTACT GAGATTCTGG AGAAGACTCA TATAATAACT 
    GTTCCAGGTT CTGGATTTGG TCCAGAAGGC GAAGAGTTCA TGAGAATTAG TGCTTTTGGA 
    CACAAAGAGA GTATCATAGA AGCCGCAAGG AGGCTGGGAA ACCTTTATCC ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0005s11790g ( XM_006383062.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006383124.2 Populus trichocarpa probable LL-diaminopimelate aminotransferase, chloroplastic (LOC18099211), mRNA.
    Price & Availability↑
    CloneID OPa429485
    Clone ID Related Accession (Same CDS sequence) XM_006383062.2
    Accession Version XM_006383062.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1323bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable LL-diaminopimelate aminotransferase, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006383062.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGTACAGCT CTTCTGCTGG CAATTCTATG TTACGTAGAA ATTTCTTGCG GCCTAGGATT 
    ATCCAGGCCA GTTATAAAAC CCAGAAAGAG GGAATTGCTT GCAATACAAA GGTACCCCGC 
    AATGTCAACA TGGAGAAGTT ACAGAGTGCC TATTTGTTTC CTGAGATCTC AATGCGTGAG 
    GTTCAACACA TTGAGAAGTA CCCAGATGCA AAATTGATAA GCCTTGGAAT TGGTGACACC 
    ACAGAGCCCA TACCGGATAT CATAGCTTCA AGCATGGCAA ACTATGCACG TTCCCTTTCA 
    ACAGCAGAAG GTTATAGTGG GTATGGAGCT GAGCAAGGCA ACAAAGCCTT GAGGAAAGCT 
    ATTGCTGAAA CATTTTACAG AGATGTTCGG GTAAAGGAAA CAGAAGTTTT TGTGTCAGAT 
    GGCTCACAGT GTGATATTAC TCGCCTTCAG CTGCTGTTTG GTTCCAATGT GTCAATAGCT 
    GTGCAGGATC CATCCTTTCC AGCCTATGTA GATTCAAGTG TCATAATTGG TCAAGCTGGT 
    GATTTTGAAG ATAAAACTGG GATGTATGGG AAAATTCAGT ACATGAAATG TCTGCCTAAA 
    ACTAACTTTT TTCCCGACTT AGCAACAGCT TCAAGGTCAG ATATAATTTT CTTTTGCTCT 
    CCGAATAATC CCACTGGTCA TGCAGCAACA CGACAGCAGT TGGAGCAACT TGTGAAGTTT 
    GCAAAGGAGA ATGGATCAAT CATAATTTTT GACTCTGCGT ATGCAGCTTA TATCAGTGAT 
    GATTCCCCTC GATCTATCTT TGAAATTCCT GGGGCGAGAG AGGTTGCGAT TGAAGTTTCC 
    TCTTTCTCTA AATTTGCTGG GTTCACAGGC ATTCGTCTTG GCTGGACAGT TGTTCCTGAA 
    GAGCTGTCCT TTTCAAATGG TTTTCCTGTA ATAAATGACT TCAATCGTAT TGTTTGCACT 
    TGCTTCAATG GAGCATCAAA TATAGCCCAG GCTGGTGGAC TGGCGTGTCT TTCCCCAGAG 
    GGTTTTGCGT CTGTGCATTC CATAATCAAA TGCTACAAGG AGAACGCAAA AATACTGCGT 
    GACACCTTTT CTTCTCTTGG TCTAAAAGTA TATGGTGGTG AAAATGCTCC TTACCTTTGG 
    GTTCATTTTC CTGGTTCAAA ATCTTGGGAT ATATTTACTG AGATTCTGGA GAAGACTCAT 
    ATAATAACTG TTCCAGGTTC TGGATTTGGT CCAGAAGGCG AAGAGTTCAT GAGAATTAGT 
    GCTTTTGGAC ACAAAGAGAG TATCATAGAA GCCGCAAGGA GGCTGGGAAA CCTTTATCCA 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006383124.2
    CDS1798..3120
    Translation

    Target ORF information:

    RefSeq Version XM_006383062.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable LL-diaminopimelate aminotransferase, chloroplastic (LOC18099211), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006383062.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGTACAGCT CTTCTGCTGG CAATTCTATG TTACGTAGAA ATTTCTTGCG GCCTAGGATT 
    ATCCAGGCCA GTTATAAAAC CCAGAAAGAG GGAATTGCTT GCAATACAAA GGTACCCCGC 
    AATGTCAACA TGGAGAAGTT ACAGAGTGCC TATTTGTTTC CTGAGATCTC AATGCGTGAG 
    GTTCAACACA TTGAGAAGTA CCCAGATGCA AAATTGATAA GCCTTGGAAT TGGTGACACC 
    ACAGAGCCCA TACCGGATAT CATAGCTTCA AGCATGGCAA ACTATGCACG TTCCCTTTCA 
    ACAGCAGAAG GTTATAGTGG GTATGGAGCT GAGCAAGGCA ACAAAGCCTT GAGGAAAGCT 
    ATTGCTGAAA CATTTTACAG AGATGTTCGG GTAAAGGAAA CAGAAGTTTT TGTGTCAGAT 
    GGCTCACAGT GTGATATTAC TCGCCTTCAG CTGCTGTTTG GTTCCAATGT GTCAATAGCT 
    GTGCAGGATC CATCCTTTCC AGCCTATGTA GATTCAAGTG TCATAATTGG TCAAGCTGGT 
    GATTTTGAAG ATAAAACTGG GATGTATGGG AAAATTCAGT ACATGAAATG TCTGCCTAAA 
    ACTAACTTTT TTCCCGACTT AGCAACAGCT TCAAGGTCAG ATATAATTTT CTTTTGCTCT 
    CCGAATAATC CCACTGGTCA TGCAGCAACA CGACAGCAGT TGGAGCAACT TGTGAAGTTT 
    GCAAAGGAGA ATGGATCAAT CATAATTTTT GACTCTGCGT ATGCAGCTTA TATCAGTGAT 
    GATTCCCCTC GATCTATCTT TGAAATTCCT GGGGCGAGAG AGGTTGCGAT TGAAGTTTCC 
    TCTTTCTCTA AATTTGCTGG GTTCACAGGC ATTCGTCTTG GCTGGACAGT TGTTCCTGAA 
    GAGCTGTCCT TTTCAAATGG TTTTCCTGTA ATAAATGACT TCAATCGTAT TGTTTGCACT 
    TGCTTCAATG GAGCATCAAA TATAGCCCAG GCTGGTGGAC TGGCGTGTCT TTCCCCAGAG 
    GGTTTTGCGT CTGTGCATTC CATAATCAAA TGCTACAAGG AGAACGCAAA AATACTGCGT 
    GACACCTTTT CTTCTCTTGG TCTAAAAGTA TATGGTGGTG AAAATGCTCC TTACCTTTGG 
    GTTCATTTTC CTGGTTCAAA ATCTTGGGAT ATATTTACTG AGATTCTGGA GAAGACTCAT 
    ATAATAACTG TTCCAGGTTC TGGATTTGGT CCAGAAGGCG AAGAGTTCAT GAGAATTAGT 
    GCTTTTGGAC ACAAAGAGAG TATCATAGAA GCCGCAAGGA GGCTGGGAAA CCTTTATCCA 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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