ORF » Species Summary » Populus trichocarpa » POPTR_0004s22680g cDNA ORF clone

POPTR_0004s22680g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0004s22680g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0004s22680g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa11326 XM_006384907.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0004s22680g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa428480 XM_006384907.2
Latest version!		 Populus trichocarpa pheophorbide a oxygenase, chloroplastic (LOC18098257), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0004s22680g ( XM_006384907.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006384969.1 Populus trichocarpa hypothetical protein (POPTR_0004s22680g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa11326
    Clone ID Related Accession (Same CDS sequence) XM_006384907.1
    Accession Version XM_006384907.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1608bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCTCTAC TTCTATCTAC CGCTTGCATC TCCAAATCTT TAACACAAAC TAATCCCAAA 
    GCCTCCCCTT TTTCACTCAC CAAAGCCTTT AACACAAAAC AACCAATTAC AAGAGTTCGA 
    AAGATCTCTC CTTTACATGT AGCAGCACCT CCCTCACAGT CAGCACCATC TGTGCGAAAA 
    GAAGAAGAAG AAGAAGAGTA TGGGGTTGAT GATGAGAGTG GAGAGGAGGT TATTGATTCT 
    AAATTCACTT GGAGAGACCA TTGGTACCCT GTTTCTTTAC TTGAGGATTT GGACCCTCTC 
    TTGCCAACCC CATTTCAGCT TCTGGGTCGT GACTTGGTTC TCTGGTTTGA TAAGGCTAAT 
    CAGGAATGGG TTGCTTTTGA TGATAAATGT CCTCACAGAC TTGCCCCTTT ATCTGAAGGA 
    AGGATCGATG AAAATGGGCA CCTGCAATGT TCATACCATG GATGGTCATT TGATGGTTGT 
    GGGTCTTGCA CACGAATCCC TCAGGCTTTA CCTGAAGGCC CTGAAGCTCG TGCAGTCAAG 
    TCTCCAAGAG CTTGTGCTAC CAGATTTCCT ACATTGGTGT CCCAAGGTCT GCTCTTTGTT 
    TGGCCAGATG AGAATGGTTG GGAAAGAGCT CAAGCCACCA AGCCTCCCAT GTTACCTGAT 
    GACTTCAATA AACCTGAGTT CTCAACGGTG ACAATTCAGC GTGATTTGTT CTACGGTTAT 
    GATACCCTCA TGGAGAATGT TTCTGATCCT TCACACATTG ACTTTGCGCA CCACAAGGTT 
    ACAGGAAGGA GAGATAGAGC CAAGCCTTTG GAATTTAAGT TGGAGTCTAG TGGCCCCTGG 
    GGCTTTGCTG GAGCCAATGA TGGGAACCCA AGGATCACTG CTGAGTTTGT TGCACCTTGT 
    TACTATGTGA ATAAAGTGGA GATAGACACA AAACTTCCCA TCGTTGGTGA TCAGAAATGG 
    ATAATATGGA TTTGTTCCTT CAATGTGCCA ATGGCACCTG GGAAGACCCG TTCAATTGTT 
    TGCAGTGCTC GAAACTTCTT CCAGTTCACA ATGCCAGGGC CTGCATGGTG GCAGGTGATT 
    CCAAGATGGC ATGAGCATTG GACTTCAAAT AAGGTATATG ATGGAGACAT GATCGTCCTT 
    CAGGGTCAAG AGAAGACATT TCTTTCACAA TCCATGGGAG GTTCTGCTGA TATTAATAAG 
    CAGTACACAA AACTCACATT CACACCCACT CAAGCAGATC GGTTCGTTTT GGAATTTCGT 
    GGTTGGCTGA GGCGACATGG CAACAGCAAA CCTGAGTGGT TTGGGCTCAC TGACAAACAA 
    CTTTTTCCAT CAGCAGTTTT ATCAAAACGT GAGATGTTGG ATAGATTTGA ACAACACACA 
    AAAAAGTGCT CATCGTGTAA AAAGGCTTAT ACATCATTCC AGACACTGCA AAAGTTTTTA 
    ATAGGTGCAA CCATTGCTTT CTGTGCAACG GTTGGAATTC CTTCGGATGT TCAACTTCGA 
    GTTGTTTTGG CTGCCCTTGC ACTTGCCAGT GCCGGCTCGG CTTACGCTTT GAATCAACTT 
    GAAAAGAATT TTGTGTTTGT TGATTATGTA CATGCTGAGA TTGATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006384969.1
    CDS147..1754
    Translation

    Target ORF information:

    RefSeq Version XM_006384907.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0004s22680g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384907.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCTCTAC TTCTATCTAC CGCTTGCATC TCCAAATCTT TAACACAAAC TAATCCCAAA 
    GCCTCCCCTT TTTCACTCAC CAAAGCCTTT AACACAAAAC AACCAATTAC AAGAGTTCGA 
    AAGATCTCTC CTTTACATGT AGCAGCACCT CCCTCACAGT CAGCACCATC TGTGCGAAAA 
    GAAGAAGAAG AAGAAGAGTA TGGGGTTGAT GATGAGAGTG GAGAGGAGGT TATTGATTCT 
    AAATTCACTT GGAGAGACCA TTGGTACCCT GTTTCTTTAC TTGAGGATTT GGACCCTCTC 
    TTGCCAACCC CATTTCAGCT TCTGGGTCGT GACTTGGTTC TCTGGTTTGA TAAGGCTAAT 
    CAGGAATGGG TTGCTTTTGA TGATAAATGT CCTCACAGAC TTGCCCCTTT ATCTGAAGGA 
    AGGATCGATG AAAATGGGCA CCTGCAATGT TCATACCATG GATGGTCATT TGATGGTTGT 
    GGGTCTTGCA CACGAATCCC TCAGGCTTTA CCTGAAGGCC CTGAAGCTCG TGCAGTCAAG 
    TCTCCAAGAG CTTGTGCTAC CAGATTTCCT ACATTGGTGT CCCAAGGTCT GCTCTTTGTT 
    TGGCCAGATG AGAATGGTTG GGAAAGAGCT CAAGCCACCA AGCCTCCCAT GTTACCTGAT 
    GACTTCAATA AACCTGAGTT CTCAACGGTG ACAATTCAGC GTGATTTGTT CTACGGTTAT 
    GATACCCTCA TGGAGAATGT TTCTGATCCT TCACACATTG ACTTTGCGCA CCACAAGGTT 
    ACAGGAAGGA GAGATAGAGC CAAGCCTTTG GAATTTAAGT TGGAGTCTAG TGGCCCCTGG 
    GGCTTTGCTG GAGCCAATGA TGGGAACCCA AGGATCACTG CTGAGTTTGT TGCACCTTGT 
    TACTATGTGA ATAAAGTGGA GATAGACACA AAACTTCCCA TCGTTGGTGA TCAGAAATGG 
    ATAATATGGA TTTGTTCCTT CAATGTGCCA ATGGCACCTG GGAAGACCCG TTCAATTGTT 
    TGCAGTGCTC GAAACTTCTT CCAGTTCACA ATGCCAGGGC CTGCATGGTG GCAGGTGATT 
    CCAAGATGGC ATGAGCATTG GACTTCAAAT AAGGTATATG ATGGAGACAT GATCGTCCTT 
    CAGGGTCAAG AGAAGACATT TCTTTCACAA TCCATGGGAG GTTCTGCTGA TATTAATAAG 
    CAGTACACAA AACTCACATT CACACCCACT CAAGCAGATC GGTTCGTTTT GGAATTTCGT 
    GGTTGGCTGA GGCGACATGG CAACAGCAAA CCTGAGTGGT TTGGGCTCAC TGACAAACAA 
    CTTTTTCCAT CAGCAGTTTT ATCAAAACGT GAGATGTTGG ATAGATTTGA ACAACACACA 
    AAAAAGTGCT CATCGTGTAA AAAGGCTTAT ACATCATTCC AGACACTGCA AAAGTTTTTA 
    ATAGGTGCAA CCATTGCTTT CTGTGCAACG GTTGGAATTC CTTCGGATGT TCAACTTCGA 
    GTTGTTTTGG CTGCCCTTGC ACTTGCCAGT GCCGGCTCGG CTTACGCTTT GAATCAACTT 
    GAAAAGAATT TTGTGTTTGT TGATTATGTA CATGCTGAGA TTGATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0004s22680g ( XM_006384907.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006384969.2 Populus trichocarpa pheophorbide a oxygenase, chloroplastic (LOC18098257), mRNA.
    Price & Availability↑
    CloneID OPa428480
    Clone ID Related Accession (Same CDS sequence) XM_006384907.2
    Accession Version XM_006384907.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1608bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product pheophorbide a oxygenase, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006384907.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCTCTAC TTCTATCTAC CGCTTGCATC TCCAAATCTT TAACACAAAC TAATCCCAAA 
    GCCTCCCCTT TTTCACTCAC CAAAGCCTTT AACACAAAAC AACCAATTAC AAGAGTTCGA 
    AAGATCTCTC CTTTACATGT AGCAGCACCT CCCTCACAGT CAGCACCATC TGTGCGAAAA 
    GAAGAAGAAG AAGAAGAGTA TGGGGTTGAT GATGAGAGTG GAGAGGAGGT TATTGATTCT 
    AAATTCACTT GGAGGGACCA TTGGTACCCT GTTTCTTTAC TTGAGGATTT GGACCCTCTC 
    TTGCCAACCC CATTTCAGCT TCTGGGTCGT GACTTGGTTC TCTGGTTTGA TAAGGCTAAT 
    CAGGAATGGG TTGCTTTTGA TGATAAATGT CCTCACAGAC TTGCCCCTTT ATCTGAAGGA 
    AGGATCGATG AAAATGGGCA CCTGCAATGT TCATACCATG GATGGTCATT TGATGGTTGT 
    GGGTCTTGCA CACGAATCCC TCAGGCTTTA CCTGAAGGCC CTGAAGCTCG TGCAGTCAAG 
    TCTCCAAGAG CTTGTGCTAC CAGATTTCCT ACAATGGTGT CCCAAGGTCT GCTCTTTGTT 
    TGGCCAGATG AGAATGGTTG GGAAAGAGCT CAAGCCACCA AGCCTCCCAT GTTACCTGAT 
    GACTTCAATA AACCTGAGTT CTCAACGGTG ACAATTCAGC GTGATTTGTT CTACGGTTAT 
    GATACCCTCA TGGAGAATGT TTCTGATCCT TCACACATTG ACTTTGCGCA CCACAAGGTT 
    ACAGGAAGGA GAGATAGAGC CAAGCCTTTG GAATTTAAGT TGGAGTCTAG TGGCCCCTGG 
    GGCTTTGCTG GAGCCAATGA TGGGAACCCA AGGATCACTG CTGAGTTTGT TGCACCTTGT 
    TACTATGTGA ATAAAGTGGA GATAGACACA AAACTTCCCA TCGTTGGTGA TCAGAAATGG 
    ATAATATGGA TTTGTTCCTT CAATGTGCCA ATGGCACCTG GGAAGACCCG TTCAATTGTT 
    TGCAGTGCTC GAAACTTCTT CCAGTTCACA ATGCCAGGGC CTGCATGGTG GCAGGTGATT 
    CCAAGATGGC ATGAGCATTG GACTTCAAAT AAGGTATATG ATGGAGACAT GATCGTCCTT 
    CAGGGTCAAG AGAAGACATT TCTTTCACAA TCCATGGGAG GTTCTGCTGA TATTAATAAG 
    CAGTACACAA AACTCACATT CACACCCACT CAAGCAGATC GGTTCGTTTT GGAATTTCGT 
    GGTTGGCTGA GGCGACATGG CAACAGCAAA CCTGAGTGGT TTGGGCTCAC TGACAAACAA 
    CTTTTTCCAT CAGCAGTTTT ATCAAAACGT GAGATGTTGG ATAGATTTGA ACAACACACA 
    AAAAAGTGCT CATCGTGTAA AAAGGCTTAT ACATCATTCC AGACACTGCA AAAGTTTTTA 
    ATAGGTGCAA CCATTGCTTT CTGTGCAACG GTTGGAATTC CTTCGGATGT TCAACTTCGA 
    GTTGTTTTGG CTGCCCTTGC ACTTGCCAGT GCCGGCTCGG CTTACGCTTT GAATCAACTT 
    GAAAAGAATT TTGTGTTTGT TGATTATGTA CATGCTGAGA TTGATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006384969.2
    CDS212..1819
    Translation

    Target ORF information:

    RefSeq Version XM_006384907.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa pheophorbide a oxygenase, chloroplastic (LOC18098257), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384907.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCTCTAC TTCTATCTAC CGCTTGCATC TCCAAATCTT TAACACAAAC TAATCCCAAA 
    GCCTCCCCTT TTTCACTCAC CAAAGCCTTT AACACAAAAC AACCAATTAC AAGAGTTCGA 
    AAGATCTCTC CTTTACATGT AGCAGCACCT CCCTCACAGT CAGCACCATC TGTGCGAAAA 
    GAAGAAGAAG AAGAAGAGTA TGGGGTTGAT GATGAGAGTG GAGAGGAGGT TATTGATTCT 
    AAATTCACTT GGAGGGACCA TTGGTACCCT GTTTCTTTAC TTGAGGATTT GGACCCTCTC 
    TTGCCAACCC CATTTCAGCT TCTGGGTCGT GACTTGGTTC TCTGGTTTGA TAAGGCTAAT 
    CAGGAATGGG TTGCTTTTGA TGATAAATGT CCTCACAGAC TTGCCCCTTT ATCTGAAGGA 
    AGGATCGATG AAAATGGGCA CCTGCAATGT TCATACCATG GATGGTCATT TGATGGTTGT 
    GGGTCTTGCA CACGAATCCC TCAGGCTTTA CCTGAAGGCC CTGAAGCTCG TGCAGTCAAG 
    TCTCCAAGAG CTTGTGCTAC CAGATTTCCT ACAATGGTGT CCCAAGGTCT GCTCTTTGTT 
    TGGCCAGATG AGAATGGTTG GGAAAGAGCT CAAGCCACCA AGCCTCCCAT GTTACCTGAT 
    GACTTCAATA AACCTGAGTT CTCAACGGTG ACAATTCAGC GTGATTTGTT CTACGGTTAT 
    GATACCCTCA TGGAGAATGT TTCTGATCCT TCACACATTG ACTTTGCGCA CCACAAGGTT 
    ACAGGAAGGA GAGATAGAGC CAAGCCTTTG GAATTTAAGT TGGAGTCTAG TGGCCCCTGG 
    GGCTTTGCTG GAGCCAATGA TGGGAACCCA AGGATCACTG CTGAGTTTGT TGCACCTTGT 
    TACTATGTGA ATAAAGTGGA GATAGACACA AAACTTCCCA TCGTTGGTGA TCAGAAATGG 
    ATAATATGGA TTTGTTCCTT CAATGTGCCA ATGGCACCTG GGAAGACCCG TTCAATTGTT 
    TGCAGTGCTC GAAACTTCTT CCAGTTCACA ATGCCAGGGC CTGCATGGTG GCAGGTGATT 
    CCAAGATGGC ATGAGCATTG GACTTCAAAT AAGGTATATG ATGGAGACAT GATCGTCCTT 
    CAGGGTCAAG AGAAGACATT TCTTTCACAA TCCATGGGAG GTTCTGCTGA TATTAATAAG 
    CAGTACACAA AACTCACATT CACACCCACT CAAGCAGATC GGTTCGTTTT GGAATTTCGT 
    GGTTGGCTGA GGCGACATGG CAACAGCAAA CCTGAGTGGT TTGGGCTCAC TGACAAACAA 
    CTTTTTCCAT CAGCAGTTTT ATCAAAACGT GAGATGTTGG ATAGATTTGA ACAACACACA 
    AAAAAGTGCT CATCGTGTAA AAAGGCTTAT ACATCATTCC AGACACTGCA AAAGTTTTTA 
    ATAGGTGCAA CCATTGCTTT CTGTGCAACG GTTGGAATTC CTTCGGATGT TCAACTTCGA 
    GTTGTTTTGG CTGCCCTTGC ACTTGCCAGT GCCGGCTCGG CTTACGCTTT GAATCAACTT 
    GAAAAGAATT TTGTGTTTGT TGATTATGTA CATGCTGAGA TTGATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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