ORF » Species Summary » Populus trichocarpa » POPTR_0001s41510g cDNA ORF clone

POPTR_0001s41510g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s41510g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s41510g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa04249 XM_006370247.2
Latest version!		 Populus trichocarpa protein SYM1 (LOC18095627), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa04249 XM_006370247.1 Populus trichocarpa hypothetical protein (POPTR_0001s41510g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s41510g ( XM_006370247.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006370309.1 Populus trichocarpa protein SYM1 (LOC18095627), mRNA.
    Price & Availability↑
    CloneID OPa04249
    Clone ID Related Accession (Same CDS sequence) XM_006370247.2 , XM_006370247.1
    Accession Version XM_006370247.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1110bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product protein SYM1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006370247.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCTGCTT TACACGCCAT TTCTCCTCAC GGTCTCCTTT CTCTTTCAAA AACCAAAAAA 
    ACCATTTCAA AAAGCCTGCA AAACCCTCAG TTTCTCAGCC CAAAATTGCC AAAGAGCCAA 
    ACTTTCTGCA GAAACAAACA GAGCTGGCAC TTGAATTCTG TTGTCCAAGA AGAGCTCGAT 
    GTTATTCCAG TACAAAGCGG TGACAGTGTA GACCAGCAAG AAGGGATGCT AGCGATTCCA 
    GTAGAGAGAG AAGGGACCGA GTTGGCTGCT CAGGTGAGTG GGTTTGGAGG GAGCGACGGG 
    CAGTTCTCTT TTGAAGGGTT CTCTTCAGCT TCAAGTTCCG GTATTGATGG AGAGAGTATA 
    GATAGGCAAT CGGAATCCGA GAGGTTAATT GATAGGACCA TCAATGCAAT GATTGTTCTT 
    GGTGCTGGTA CTTATGCTAT CACCAAGTTG CTCACAATTG ACCATAATTA CTGGCATGGG 
    TGGACTCTCT TTGAGATACT AAGATATGCT CCTCAACACA ACTGGTCTGC TTATGAGGAA 
    GCTCTAAAGA CAAACCCAGT TTTAGCAAAA ATGATGATTA GTGGCATAGT CTACTCTCTA 
    GGGGATTGGA TTGCTCAGTG CTATGAAGGT AAACCCCTCT TCGAGTACGA CCGCACAAGA 
    ATGTTTAGAT CGGGCCTTGT TGGCTTTACA TTACATGGTT CCCTTTCACA TTACTATTAC 
    CAGTTTTGTG AGGAGCTTTT TCCCTTCCAA GATTGGTGGG TGGTTCCTGC CAAAGTAGCC 
    TTTGACCAAA CTTTGTGGGC AGCAGCTTGG AACAGCATTT ATTTCACAGC CTTGGGATTC 
    TTGCGTCTGG AATCACCTGC CAGCATTTTC AGTGAACTGA CAGCTACATT CTGGCCTATG 
    CTTACAGCAG GATGGAAGCT TTGGCCGTTT GCTCATCTTA TCACATATGG TGTGATCCCT 
    GTAGAACAAA GACTCCTTTG GGTGGACTGT GTAGAACTCA TCTGGGTGAC CATACTGTCT 
    ACTTATTCAA ACGAGAAATC AGAAGCAAGA ATATCTGAGG CAGCAGTAGA AGCTTCTTCC 
    AGTTCTCTGC CCAGTTCTCC TGAGGAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006370309.1
    CDS95..1204
    Translation

    Target ORF information:

    RefSeq Version XM_006370247.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein SYM1 (LOC18095627), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006370247.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCTGCTT TACACGCCAT TTCTCCTCAC GGTCTCCTTT CTCTTTCAAA AACCAAAAAA 
    ACCATTTCAA AAAGCCTGCA AAACCCTCAG TTTCTCAGCC CAAAATTGCC AAAGAGCCAA 
    ACTTTCTGCA GAAACAAACA GAGCTGGCAC TTGAATTCTG TTGTCCAAGA AGAGCTCGAT 
    GTTATTCCAG TACAAAGCGG TGACAGTGTA GACCAGCAAG AAGGGATGCT AGCGATTCCA 
    GTAGAGAGAG AAGGGACCGA GTTGGCTGCT CAGGTGAGTG GGTTTGGAGG GAGCGACGGG 
    CAGTTCTCTT TTGAAGGGTT CTCTTCAGCT TCAAGTTCCG GTATTGATGG AGAGAGTATA 
    GATAGGCAAT CGGAATCCGA GAGGTTAATT GATAGGACCA TCAATGCAAT GATTGTTCTT 
    GGTGCTGGTA CTTATGCTAT CACCAAGTTG CTCACAATTG ACCATAATTA CTGGCATGGG 
    TGGACTCTCT TTGAGATACT AAGATATGCT CCTCAACACA ACTGGTCTGC TTATGAGGAA 
    GCTCTAAAGA CAAACCCAGT TTTAGCAAAA ATGATGATTA GTGGCATAGT CTACTCTCTA 
    GGGGATTGGA TTGCTCAGTG CTATGAAGGT AAACCCCTCT TCGAGTACGA CCGCACAAGA 
    ATGTTTAGAT CGGGCCTTGT TGGCTTTACA TTACATGGTT CCCTTTCACA TTACTATTAC 
    CAGTTTTGTG AGGAGCTTTT TCCCTTCCAA GATTGGTGGG TGGTTCCTGC CAAAGTAGCC 
    TTTGACCAAA CTTTGTGGGC AGCAGCTTGG AACAGCATTT ATTTCACAGC CTTGGGATTC 
    TTGCGTCTGG AATCACCTGC CAGCATTTTC AGTGAACTGA CAGCTACATT CTGGCCTATG 
    CTTACAGCAG GATGGAAGCT TTGGCCGTTT GCTCATCTTA TCACATATGG TGTGATCCCT 
    GTAGAACAAA GACTCCTTTG GGTGGACTGT GTAGAACTCA TCTGGGTGAC CATACTGTCT 
    ACTTATTCAA ACGAGAAATC AGAAGCAAGA ATATCTGAGG CAGCAGTAGA AGCTTCTTCC 
    AGTTCTCTGC CCAGTTCTCC TGAGGAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s41510g ( XM_006370247.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006370309.1 Populus trichocarpa hypothetical protein (POPTR_0001s41510g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa04249
    Clone ID Related Accession (Same CDS sequence) XM_006370247.2 , XM_006370247.1
    Accession Version XM_006370247.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1110bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCTGCTT TACACGCCAT TTCTCCTCAC GGTCTCCTTT CTCTTTCAAA AACCAAAAAA 
    ACCATTTCAA AAAGCCTGCA AAACCCTCAG TTTCTCAGCC CAAAATTGCC AAAGAGCCAA 
    ACTTTCTGCA GAAACAAACA GAGCTGGCAC TTGAATTCTG TTGTCCAAGA AGAGCTCGAT 
    GTTATTCCAG TACAAAGCGG TGACAGTGTA GACCAGCAAG AAGGGATGCT AGCGATTCCA 
    GTAGAGAGAG AAGGGACCGA GTTGGCTGCT CAGGTGAGTG GGTTTGGAGG GAGCGACGGG 
    CAGTTCTCTT TTGAAGGGTT CTCTTCAGCT TCAAGTTCCG GTATTGATGG AGAGAGTATA 
    GATAGGCAAT CGGAATCCGA GAGGTTAATT GATAGGACCA TCAATGCAAT GATTGTTCTT 
    GGTGCTGGTA CTTATGCTAT CACCAAGTTG CTCACAATTG ACCATAATTA CTGGCATGGG 
    TGGACTCTCT TTGAGATACT AAGATATGCT CCTCAACACA ACTGGTCTGC TTATGAGGAA 
    GCTCTAAAGA CAAACCCAGT TTTAGCAAAA ATGATGATTA GTGGCATAGT CTACTCTCTA 
    GGGGATTGGA TTGCTCAGTG CTATGAAGGT AAACCCCTCT TCGAGTACGA CCGCACAAGA 
    ATGTTTAGAT CGGGCCTTGT TGGCTTTACA TTACATGGTT CCCTTTCACA TTACTATTAC 
    CAGTTTTGTG AGGAGCTTTT TCCCTTCCAA GATTGGTGGG TGGTTCCTGC CAAAGTAGCC 
    TTTGACCAAA CTTTGTGGGC AGCAGCTTGG AACAGCATTT ATTTCACAGC CTTGGGATTC 
    TTGCGTCTGG AATCACCTGC CAGCATTTTC AGTGAACTGA CAGCTACATT CTGGCCTATG 
    CTTACAGCAG GATGGAAGCT TTGGCCGTTT GCTCATCTTA TCACATATGG TGTGATCCCT 
    GTAGAACAAA GACTCCTTTG GGTGGACTGT GTAGAACTCA TCTGGGTGAC CATACTGTCT 
    ACTTATTCAA ACGAGAAATC AGAAGCAAGA ATATCTGAGG CAGCAGTAGA AGCTTCTTCC 
    AGTTCTCTGC CCAGTTCTCC TGAGGAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006370309.1
    CDS75..1184
    Translation

    Target ORF information:

    RefSeq Version XM_006370247.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s41510g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006370247.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCTGCTT TACACGCCAT TTCTCCTCAC GGTCTCCTTT CTCTTTCAAA AACCAAAAAA 
    ACCATTTCAA AAAGCCTGCA AAACCCTCAG TTTCTCAGCC CAAAATTGCC AAAGAGCCAA 
    ACTTTCTGCA GAAACAAACA GAGCTGGCAC TTGAATTCTG TTGTCCAAGA AGAGCTCGAT 
    GTTATTCCAG TACAAAGCGG TGACAGTGTA GACCAGCAAG AAGGGATGCT AGCGATTCCA 
    GTAGAGAGAG AAGGGACCGA GTTGGCTGCT CAGGTGAGTG GGTTTGGAGG GAGCGACGGG 
    CAGTTCTCTT TTGAAGGGTT CTCTTCAGCT TCAAGTTCCG GTATTGATGG AGAGAGTATA 
    GATAGGCAAT CGGAATCCGA GAGGTTAATT GATAGGACCA TCAATGCAAT GATTGTTCTT 
    GGTGCTGGTA CTTATGCTAT CACCAAGTTG CTCACAATTG ACCATAATTA CTGGCATGGG 
    TGGACTCTCT TTGAGATACT AAGATATGCT CCTCAACACA ACTGGTCTGC TTATGAGGAA 
    GCTCTAAAGA CAAACCCAGT TTTAGCAAAA ATGATGATTA GTGGCATAGT CTACTCTCTA 
    GGGGATTGGA TTGCTCAGTG CTATGAAGGT AAACCCCTCT TCGAGTACGA CCGCACAAGA 
    ATGTTTAGAT CGGGCCTTGT TGGCTTTACA TTACATGGTT CCCTTTCACA TTACTATTAC 
    CAGTTTTGTG AGGAGCTTTT TCCCTTCCAA GATTGGTGGG TGGTTCCTGC CAAAGTAGCC 
    TTTGACCAAA CTTTGTGGGC AGCAGCTTGG AACAGCATTT ATTTCACAGC CTTGGGATTC 
    TTGCGTCTGG AATCACCTGC CAGCATTTTC AGTGAACTGA CAGCTACATT CTGGCCTATG 
    CTTACAGCAG GATGGAAGCT TTGGCCGTTT GCTCATCTTA TCACATATGG TGTGATCCCT 
    GTAGAACAAA GACTCCTTTG GGTGGACTGT GTAGAACTCA TCTGGGTGAC CATACTGTCT 
    ACTTATTCAA ACGAGAAATC AGAAGCAAGA ATATCTGAGG CAGCAGTAGA AGCTTCTTCC 
    AGTTCTCTGC CCAGTTCTCC TGAGGAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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