ORF » Species Summary » Populus trichocarpa » LOC18094966 cDNA ORF clone

LOC18094966 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18094966 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18094966 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa03665 XM_006369376.1
Latest version!		 Populus trichocarpa glycosyl hydrolase family 1 family protein (POPTR_0001s23430g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa421663 XM_006369376.2
Latest version!		 Populus trichocarpa vicianin hydrolase (LOC18094966), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18094966 ( XM_006369376.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006369438.1 Populus trichocarpa glycosyl hydrolase family 1 family protein (POPTR_0001s23430g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa03665
    Clone ID Related Accession (Same CDS sequence) XM_006369376.1
    Accession Version XM_006369376.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1521bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product glycosyl hydrolase family 1 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAATTA GAGGTCCTTT ACTAGTTTTG TTCCTGGCAT TAATTTGCTT GGTAGCAACC 
    ACCCATGGTG CAAAACCAAG CCCTCTTGTG CCATTTAGCC GAAGCAGTTT CCCACCTGGT 
    TTTTTGTTCG GAGCTGGATC TGCTGCCTAT CAGATTGAAG GAGCAGCACT GATTGACGGA 
    AGGGGATTTA GCATATGGGA TAAATTCACG AGGGAACATC CAGAAAAGAT TTGGGATCGC 
    AGCAATGGAG ATGTAGCAAG TGATTTTTAT CACAAGTTCA AGGATGACAT AAAATTGATG 
    AAACGTGTTG GCTTGGATAC CTTCAGACTT TCCTTTTCTT GGAGCAGAAT ATTGCCGAAG 
    GGAAAAGTTA GTCGAGGAGT GAACCCACTG GGTGTTAAGT TCTACAACAA CGTCATCAAC 
    GAGCTTCTTC ACAATGGTAT AAAACCCCTT GTGACGTTAC TCCATTATGA TCCTCCACAA 
    AGTCTCTATG ATGAGTACGG TGGATTCCTA AGCTCCAAGA TAGTAGATGA TTTTGCAGAG 
    TATGCAGACT TTTGCTTCAA AACATTTGGT GATCGAGTGA AATATTGGAT AACAATGAAC 
    GAACCAAATG GGCTGGCTAT TAATGGTTAC ACTTTCGGTT CCTTTGCACC CGGTCGATGT 
    TCTAAAACTC TTGGAAACTG CCCTGGGGGC AACTCTGCCG TCGAGCCCTA TGTTGCTGCC 
    CACAACATGA TTCTTAGCCA TGGAGCTGCC GTTAAAGTAT ACAAGGACAA GTACCAGGCT 
    ATTCAAAAGG GGCAAATTGG AATGACAATC GTAAGCCATT GGTTCGTACC AAAATTTAAT 
    ACAACTGCTG ACCGCATAGC TGTTTCCAGA GCTTTGGATT TCATGTTTGG ATGGTTTGCA 
    CATCCAATTA CATTTGGTGA TTACCCCGAT AGCATGAGAT CTTTGGTTGG AAATCGACTG 
    CCCAAATTTA CCAAAGAACA GTCTGCAATG CTAAAAGGAT CCCTCGATTT TCTTGGCTTA 
    AACTACTATA CAACAAATTA TGCAGAAAGC ATTCCTTTGA AAGCTACCGG GGCTAACCTT 
    AGTTATACTG ACGATAGGCG TGTCAGTCAA ACTACTGAGA AAAATGGAGT TCCCATCGGC 
    ACACCGACTG ACTTGAACTG GCTTTACGTC TACCCGAGGG GAATACAAGA TGTTCTGCTG 
    TACATCAAAT ATAATTACAA AAATCCACCA GTTTTTATTA CTGAAAATGG AATTGCTGAA 
    AATGCGTCGC GACCGATTGC CTTTGCCCTC AAGGATAGTT GGAGAATAAG ATACCACAGT 
    GCCCACCTCT CATATCTTTT GAAAGCTATC CAGAAGGGAG CTAACGTGAA GGCATACTAT 
    ATATGGTCAT TTTTGGACGA CTTCGAATGG GATGCTGGCT ACACTGTTCG CTTCGGTGTG 
    ACTTACGTTG ATTTCAAGAA TAATTTGAAA CGATATCTGA AAAGTTCAGC TAGATGGTTC 
    CAGCTCTTGC TTAAAAAGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006369438.1
    CDS3..1523
    Translation

    Target ORF information:

    RefSeq Version XM_006369376.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa glycosyl hydrolase family 1 family protein (POPTR_0001s23430g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006369376.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAATTA GAGGTCCTTT ACTAGTTTTG TTCCTGGCAT TAATTTGCTT GGTAGCAACC 
    ACCCATGGTG CAAAACCAAG CCCTCTTGTG CCATTTAGCC GAAGCAGTTT CCCACCTGGT 
    TTTTTGTTCG GAGCTGGATC TGCTGCCTAT CAGATTGAAG GAGCAGCACT GATTGACGGA 
    AGGGGATTTA GCATATGGGA TAAATTCACG AGGGAACATC CAGAAAAGAT TTGGGATCGC 
    AGCAATGGAG ATGTAGCAAG TGATTTTTAT CACAAGTTCA AGGATGACAT AAAATTGATG 
    AAACGTGTTG GCTTGGATAC CTTCAGACTT TCCTTTTCTT GGAGCAGAAT ATTGCCGAAG 
    GGAAAAGTTA GTCGAGGAGT GAACCCACTG GGTGTTAAGT TCTACAACAA CGTCATCAAC 
    GAGCTTCTTC ACAATGGTAT AAAACCCCTT GTGACGTTAC TCCATTATGA TCCTCCACAA 
    AGTCTCTATG ATGAGTACGG TGGATTCCTA AGCTCCAAGA TAGTAGATGA TTTTGCAGAG 
    TATGCAGACT TTTGCTTCAA AACATTTGGT GATCGAGTGA AATATTGGAT AACAATGAAC 
    GAACCAAATG GGCTGGCTAT TAATGGTTAC ACTTTCGGTT CCTTTGCACC CGGTCGATGT 
    TCTAAAACTC TTGGAAACTG CCCTGGGGGC AACTCTGCCG TCGAGCCCTA TGTTGCTGCC 
    CACAACATGA TTCTTAGCCA TGGAGCTGCC GTTAAAGTAT ACAAGGACAA GTACCAGGCT 
    ATTCAAAAGG GGCAAATTGG AATGACAATC GTAAGCCATT GGTTCGTACC AAAATTTAAT 
    ACAACTGCTG ACCGCATAGC TGTTTCCAGA GCTTTGGATT TCATGTTTGG ATGGTTTGCA 
    CATCCAATTA CATTTGGTGA TTACCCCGAT AGCATGAGAT CTTTGGTTGG AAATCGACTG 
    CCCAAATTTA CCAAAGAACA GTCTGCAATG CTAAAAGGAT CCCTCGATTT TCTTGGCTTA 
    AACTACTATA CAACAAATTA TGCAGAAAGC ATTCCTTTGA AAGCTACCGG GGCTAACCTT 
    AGTTATACTG ACGATAGGCG TGTCAGTCAA ACTACTGAGA AAAATGGAGT TCCCATCGGC 
    ACACCGACTG ACTTGAACTG GCTTTACGTC TACCCGAGGG GAATACAAGA TGTTCTGCTG 
    TACATCAAAT ATAATTACAA AAATCCACCA GTTTTTATTA CTGAAAATGG AATTGCTGAA 
    AATGCGTCGC GACCGATTGC CTTTGCCCTC AAGGATAGTT GGAGAATAAG ATACCACAGT 
    GCCCACCTCT CATATCTTTT GAAAGCTATC CAGAAGGGAG CTAACGTGAA GGCATACTAT 
    ATATGGTCAT TTTTGGACGA CTTCGAATGG GATGCTGGCT ACACTGTTCG CTTCGGTGTG 
    ACTTACGTTG ATTTCAAGAA TAATTTGAAA CGATATCTGA AAAGTTCAGC TAGATGGTTC 
    CAGCTCTTGC TTAAAAAGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18094966 ( XM_006369376.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006369438.2 Populus trichocarpa vicianin hydrolase (LOC18094966), mRNA.
    Price & Availability↑
    CloneID OPa421663
    Clone ID Related Accession (Same CDS sequence) XM_006369376.2
    Accession Version XM_006369376.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1521bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product vicianin hydrolase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006369376.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAATTA GAGGTCCTTT ACTAGTTTTG TTCCTGGCAT TAATTTGCTT GGTAGCAACC 
    ACCCATGGTG CAAAACCAAG CCCTCTTGTG CCATTTAGCC GAAGCAGTTT CCCACCTGGT 
    TTTTTGTTCG GAGCTGGATC TGCTGCCTAT CAGATTGAAG GAGCAGCACT GATTGACGGA 
    AGGGGATTTA GCATATGGGA TAAATTCACG AGGGAACATC CAGAAAAGAT TTGGGATCGC 
    AGCAATGGAG ATGTAGCAAG TGATTTTTAT CACAAGTTCA AGGATGACAT AAAATTGATG 
    AAACGTGTTG GCTTGGATAC CTTCAGACTT TCCTTTTCTT GGAGCAGAAT ATTGCCGAAG 
    GGAAAAGTTA GTCGAGGAGT GAACCCACTG GGTGTTAAGT TCTACAACAA CGTCATCAAC 
    GAGCTTCTTC ACAATGGTAT AAAACCCCTT GTGACGTTAC TCCATTATGA TCCTCCACAA 
    AGTCTCTATG ATGAGTACGG TGGATTCCTA AGCTCCAAGA TAGTAGATGA TTTTGCAGAG 
    TATGCAGACT TTTGCTTCAA AACATTTGGT GATCGAGTGA AATATTGGAT AACAATGAAC 
    GAACCAAATG GGCTGGCTAT TAATGGTTAC ACTTTCGGTT CCTTTGCACC CGGTCGATGT 
    TCTAAAACTC TTGGAAACTG CCCTGGGGGC AACTCTGCCG TCGAGCCCTA TGTTGCTGCC 
    CACAACATGA TTCTTAGCCA TGGAGCTGCC GTTAAAGTAT ACAAGGACAA GTACCAGGCT 
    ATTCAAAAGG GGCAAATTGG AATTACAATC GTAAGCCATT GGTTCGTACC AAAATTTAAT 
    ACAACTGCTG ACCGCATAGC TGTTTCCAGA GCTTTGGATT TCATGTTTGG ATGGTTTGCA 
    CATCCAATTA CATTTGGTGA TTACCCCGAT AGCATGAGAT CTTTGGTTGG AAATCGACTG 
    CCCAAATTTA CCAAAGAACA GTCTGCAATG CTAAAAGGAT CCCTCGATTT TCTTGGCTTA 
    AACTACTATA CAACAAATTA TGCAGAAAGC ATTCCTTTGA AAGCTACCGG GGCTAACCTT 
    AGTTATACTG ACGATAGGCG TGTCAGTCAA ACTACTGAGA AAAATGGAGT TCCCATCGGC 
    ACACCGACTG ACTTGAACTG GCTTTACGTC TACCCGAGGG GAATACAAGA TGTTCTGCTG 
    TACATCAAAT ATAATTACAA AAATCCACCA GTTTTTATTA CTGAAAATGG AATTGCTGAA 
    AATGCGTCGC GACCGATTGC CTTTGCCCTC AAGGATAGTT GGAGAATAAG ATACCACAGT 
    GCCCACCTCT CATATCTTTT GAAAGCTATC CAGAAGGGAG CTAACGTGAA GGCATACTAT 
    ATATGGTCAT TTTTGGACGA CTTCGAATGG GATGCTGGCT ACACTGTTCG CTTCGGTGTG 
    ACTTACGTTG ATTTCAAGAA TAATTTGAAA CGATATCTGA AAAGTTCAGC TAGATGGTTC 
    CAGCTCTTGC TTAAAAAGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006369438.2
    CDS20..1540
    Translation

    Target ORF information:

    RefSeq Version XM_006369376.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa vicianin hydrolase (LOC18094966), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006369376.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAATTA GAGGTCCTTT ACTAGTTTTG TTCCTGGCAT TAATTTGCTT GGTAGCAACC 
    ACCCATGGTG CAAAACCAAG CCCTCTTGTG CCATTTAGCC GAAGCAGTTT CCCACCTGGT 
    TTTTTGTTCG GAGCTGGATC TGCTGCCTAT CAGATTGAAG GAGCAGCACT GATTGACGGA 
    AGGGGATTTA GCATATGGGA TAAATTCACG AGGGAACATC CAGAAAAGAT TTGGGATCGC 
    AGCAATGGAG ATGTAGCAAG TGATTTTTAT CACAAGTTCA AGGATGACAT AAAATTGATG 
    AAACGTGTTG GCTTGGATAC CTTCAGACTT TCCTTTTCTT GGAGCAGAAT ATTGCCGAAG 
    GGAAAAGTTA GTCGAGGAGT GAACCCACTG GGTGTTAAGT TCTACAACAA CGTCATCAAC 
    GAGCTTCTTC ACAATGGTAT AAAACCCCTT GTGACGTTAC TCCATTATGA TCCTCCACAA 
    AGTCTCTATG ATGAGTACGG TGGATTCCTA AGCTCCAAGA TAGTAGATGA TTTTGCAGAG 
    TATGCAGACT TTTGCTTCAA AACATTTGGT GATCGAGTGA AATATTGGAT AACAATGAAC 
    GAACCAAATG GGCTGGCTAT TAATGGTTAC ACTTTCGGTT CCTTTGCACC CGGTCGATGT 
    TCTAAAACTC TTGGAAACTG CCCTGGGGGC AACTCTGCCG TCGAGCCCTA TGTTGCTGCC 
    CACAACATGA TTCTTAGCCA TGGAGCTGCC GTTAAAGTAT ACAAGGACAA GTACCAGGCT 
    ATTCAAAAGG GGCAAATTGG AATTACAATC GTAAGCCATT GGTTCGTACC AAAATTTAAT 
    ACAACTGCTG ACCGCATAGC TGTTTCCAGA GCTTTGGATT TCATGTTTGG ATGGTTTGCA 
    CATCCAATTA CATTTGGTGA TTACCCCGAT AGCATGAGAT CTTTGGTTGG AAATCGACTG 
    CCCAAATTTA CCAAAGAACA GTCTGCAATG CTAAAAGGAT CCCTCGATTT TCTTGGCTTA 
    AACTACTATA CAACAAATTA TGCAGAAAGC ATTCCTTTGA AAGCTACCGG GGCTAACCTT 
    AGTTATACTG ACGATAGGCG TGTCAGTCAA ACTACTGAGA AAAATGGAGT TCCCATCGGC 
    ACACCGACTG ACTTGAACTG GCTTTACGTC TACCCGAGGG GAATACAAGA TGTTCTGCTG 
    TACATCAAAT ATAATTACAA AAATCCACCA GTTTTTATTA CTGAAAATGG AATTGCTGAA 
    AATGCGTCGC GACCGATTGC CTTTGCCCTC AAGGATAGTT GGAGAATAAG ATACCACAGT 
    GCCCACCTCT CATATCTTTT GAAAGCTATC CAGAAGGGAG CTAACGTGAA GGCATACTAT 
    ATATGGTCAT TTTTGGACGA CTTCGAATGG GATGCTGGCT ACACTGTTCG CTTCGGTGTG 
    ACTTACGTTG ATTTCAAGAA TAATTTGAAA CGATATCTGA AAAGTTCAGC TAGATGGTTC 
    CAGCTCTTGC TTAAAAAGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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