PKH_121650 cDNA ORF clone, Plasmodium knowlesi strain H

Gene
Clones
gRNAs

Summary

Gene Symbol	PKH_121650
Entrez Gene ID	7322467
Full Name	1-deoxy-D-xylulose 5-phosphate synthase,putative
Gene Type	protein-coding
Organism	Plasmodium knowlesi strain H

mRNA and Protein(s)

mRNA	Protein	Name
XM_002259939.1	XP_002259975.1	1-deoxy-D-xylulose 5-phosphate synthase,putative

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The genome of the simian and human malaria parasite Plasmodium knowlesi.
Pain A, Böhme U, Berry AE, Mungall K, Finn RD, Jackson AP, Mourier T, Mistry J, Pasini EM, Aslett MA, Balasubrammaniam S, Borgwardt K, Brooks K, Carret C, Carver TJ, Cherevach I, Chillingworth T, Clark TG, Galinski MR, Hall N, Harper D, Harris D, Hauser H, Ivens A, Janssen CS, Keane T, Larke N, Lapp S, Marti M, Moule S, Meyer IM, Ormond D, Peters N, Sanders M, Sanders S, Sargeant TJ, Simmonds M, Smith F, Squares R, Thurston S, Tivey AR, Walker D, White B, Zuiderwijk E, Churcher C, Quail MA, Cowman AF, Turner CM, Rajandream MA, Kocken CH, Thomas AW, Newbold CI, Barrell BG, Berriman M
Nature455(7214)799-803(2008 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PKH_121650 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PKH_121650 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPs03061	XM_002259939.1 Latest version!	Plasmodium knowlesi strain H 1-deoxy-D-xylulose 5-phosphate synthase,putative partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PKH_121650 ( XM_002259939.1 ) cDNA ORF clone, Plasmodium knowlesi strain H -> XP_002259975.1 Plasmodium knowlesi strain H 1-deoxy-D-xylulose 5-phosphate synthase,putative partial mRNA.

Price & Availability↑

CloneID	OPs03061
Clone ID Related Accession (Same CDS sequence)	XM_002259939.1
Accession Version	XM_002259939.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3369bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497456000000
Organism	Plasmodium knowlesi strain H
Product	1-deoxy-D-xylulose 5-phosphate synthase,putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011913). COMPLETENESS: incomplete on both ends.

ATGATAATGG GAACGCCCTC TCTCCTGTAT TTGTTCACAC TGATCATTAC CTCCATGCAT 
TTCACGGTAA ACGCCACCAG CGGAAAATGC CAAGTAAGTA GAAATGTCAT GTACCGGAAG 
CAGTTAAACA GGATTACCAC GAAAAGGTAT TATTTGTGTA AAATTTTTAA GGACAGTTTT 
CCGTGTTTTT TTGGTATCTC TGGGTATGAC CAAAATGGTA GTAGTGGCGA TCTCCTCAAG 
CGTACTGCTA TACAGTGGAA TCAGTTAAAA ATAGAAAATG AAATCTTCCA CAGGGGAAAA 
CCTTCCGATG AGGTACAAGT AGAAAGCCCA GTACAAAAAA GGAATGTCGC CCATGATGAC 
CAGCGGATAG ATAACCTTAA GGGAGCTACA AAACGGTTCA TACAGGATGG ACACCATTAC 
TCCCTTAACG CAAAGAATCC ACGCGGTGGA AGCAGTGGTA GCTGGACATA TCCACCCACG 
GAAAAAGGGC CAAATGTGTT CTTCATAAAT TATACTAATT TAAAGCAATT GAGAAAATAT 
GGCCTGAGAA AAGGGGATCC TTTTATCACA CGAAAGTCGA CATTTTTACA CACCTATGAA 
GGTAATCGAT TGGGGAATTA CTCCACCAGT GCAACTGTAG GAGAGAAGCT TTTTACAGTC 
AAGAACGAAG ACACCCAAAC GGGGAAAGAG GCGCAATTCA TCACACGTGC GAAGAAAAGC 
GATGATGCCA AGGACCCCCC CAATTTGGAT GCCATCTTTG ATCAAATAAA CAGCTATCTG 
GATATTGAAA AATATAAAGA TTCATATGGT GAAGAAGTTT ATAATCAGAT AGTTAAATTA 
TACGTACATA GGCATGTCCC CGAAAATTAC GAACAATTGT TCTTCATGGA ACAACCGCAG 
AAGAGCGTTG CATTGGACGT AGACAAATAT GATGAGGACC AATTTCAGAA ACTAATTGAA 
GAGGAATTCC AAAGAAATGG AGTCCACATA GAAAACATCA ATAAAGAATA CTACAAAAGA 
GAGAATATCA AGAAAACTCT TAAGGTCCTA AATTACTTAC CTCTACTAAA TTTAATAAAC 
AATCCAAATG ATTTGAAAAA ATTGAAGAAG GAATATCTAC CTCTATTGGC TCACGAATTA 
AAAATGTTCC TTTTTTTCAT GGTTAATCTA AGTGGTGGTC ATTTTTCCGC TGGGTTGAGC 
TTGCTAGAGG TGCAGCTGAT GTTAATGTAT CTGTTTGATC AGCCCCATGA TGATGTGATA 
TACGATATAG GCCATCAGAC CTACGTACAC AAAATACTCA CAGGGAGAAA GTTCATTTTT 
TTATCTCTAA GACAGAAAGA GGGATTATGT GGCTTTCTAA ACACATTTGA AAGCACCTAC 
GACAAGTTTG GGGCAGGCCA TAGCTCCACT GCACTGAGTG CAATTCAGGG GTTTTATGAA 
GCCGACTGGC AGGTATGTCA AAACAGAAGA AACACCAAAT CGGAAGGAAA AGAAGCACAT 
CCCTTTGAAG ACACAGAAAA TATCACTTTT ATCCAACCTG GTGGAGAAGA CCAAATCCAT 
GCAGGGGAGA ACCTTCATGC AAGTCATCCC AAGGGAGGAG GAAATCCAAC ACAACAAAGT 
TCCTACCCTG GGCGAAATAA CTTAGCTGAT CATTTGAACA AAGTGCATAT CGCCATCATT 
GGGGACGGTG GCCTAACCGG TGGTATGGCA TTGGAAGCGC TGAATTACAT TTCCTTTTTA 
AATTCTAAAG TACTAATTAT TTATAATGAC AATGGGCAGG TATCTCTCCC CACTAATGCA 
CCCAGTATCT CGGGGCATCG ACCAATCGGC TCCATCTCTG ACCATCTGCG TAGTTTTATC 
ACAAGAAAAA GTGGAAAAGG AGACAGCCAA AATTCCAGCG ATAAGGAAAA AAACAACTTT 
TTTGAAAATT TAAACTACGA CTATGTGCAA GTCCAAAACG GAAATAACAC AGAAGCCCTT 
TTCAACGTGT TGTCGTCCTT TAAAAAGGGA AGTATGAATA GAGCCACTGT ATTGCATGTC 
TGTACGAACA AAACCAGTGA GTTTATAAAC AGTAGGGCAC CGATAACTGT GATGCATTCT 
ATTAAGAAGA ACGAAATCTT TCCATTCAAT GTGGATATGC TTAGCTCAGA TGGGCAGAAA 
GTTAAGTCTC CAGAGCCCAC CGCCCATAGC CAAGATGATA AGATGTACAG TGGAAAATCC 
CCCCCCACGA CACCACAACA ACAGTGGATG TTCTCCAAGA AAACCTTCAC AGATGTGTAC 
ACAGAAGAAA TGCTAAAATA TTTGGAGAGA GATAAAAATA TCATCTTCAT TTCTCCAGCC 
ATGTTAGGGG GATCCGGATT AGTAAAGATC AGCGACAAGT ACCCCAACAA TGTATATGAC 
GTAGGAATCG CAGAACAACA CGCAACAACC TTTGCGACAG CCATGGCCAT GAATAAGAAC 
CTAAAGGTTC ACCTATGCAT TTATTCTACA TTTATGCAAA GAGCATATGA TCAAATAATA 
CATGATTTGA ATTTACAGAA GGTTCCGTTA AAGGTTATTA TCGGTAGGAG TGGCTTAGTC 
GGGGAAGATG GAGCTACTCA CCAAGGAATC TACGACCTTA CTATTTTGGG TGCCTTGAAC 
AATGCATGCG TTATATCCCC TAGCAACCAA GTGGACTTGA AGAAGGCTCT CAAGTTTTGC 
TACCATGATG TGAAACGATC TGTGTTTGTT CGCCTCCCCA GGATTAACAC CTTCACGGAG 
GAGTACCTGC AGAGGTATTT CCGCATCGGG GAGCAGCTCC AGGGAGATGG AAACGTAGGG 
CATAACAGGC AAATAGATTG GGAAAAAGCA AACAAGGGGG GAGATCCCCG CAACGACGAT 
ATGCAATCAT TCTTTGGAAA GGCGCGAGTC ATCAAAATGA GCCCAGAAAA AAATGAACCA 
AGAGAAGGAA GGAAAAAAAA AGTGTCCATT TTTAACATGG GTAGTATGCT ATTCAATGTA 
CTGAACGCTA TCGAAGAAAT CGAAAAGGAC CAATTTTTCT CCAATAAATT TTCCTTCTCA 
ATTATAGATA TGATTTTCCT AAATCCAATG GATAAAAAAA TAATAGATTA CTTAATAGAG 
GAGAATAAGC ATGACGTACA TATAACCTAC GAGGACAACA CTGTAGGTGG ATTTTCAACC 
CACTTCAATA ACTACCTAAT AGAGAAGAAT TACATTTCCA GACATCAGTT GTCTGTTCAT 
AATATTTACG TACCAAATGA TCCCATTGAA CACTCCACGT ATGTACAACA ATACACAGAT 
GTAAAAATGG ATTCTAATAG CTTAGTGAAA AGAATAAAGA GTTTCTTACA AGGACAACTG 
TCCAATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002259975.1
CDS	1..3369
Translation	MIMGTPSLLYLFTLIITSMHFTVNATSGKCQVSRNVMYRKQLNRITTKRYYLCKIFKDSFPCFFGISGYDQNGSSGDLLKRTAIQWNQLKIENEIFHRGKPSDEVQVESPVQKRNVAHDDQRIDNLKGATKRFIQDGHHYSLNAKNPRGGSSGSWTYPPTEKGPNVFFINYTNLKQLRKYGLRKGDPFITRKSTFLHTYEGNRLGNYSTSATVGEKLFTVKNEDTQTGKEAQFITRAKKSDDAKDPPNLDAIFDQINSYLDIEKYKDSYGEEVYNQIVKLYVHRHVPENYEQLFFMEQPQKSVALDVDKYDEDQFQKLIEEEFQRNGVHIENINKEYYKRENIKKTLKVLNYLPLLNLINNPNDLKKLKKEYLPLLAHELKMFLFFMVNLSGGHFSAGLSLLEVQLMLMYLFDQPHDDVIYDIGHQTYVHKILTGRKFIFLSLRQKEGLCGFLNTFESTYDKFGAGHSSTALSAIQGFYEADWQVCQNRRNTKSEGKEAHPFEDTENITFIQPGGEDQIHAGENLHASHPKGGGNPTQQSSYPGRNNLADHLNKVHIAIIGDGGLTGGMALEALNYISFLNSKVLIIYNDNGQVSLPTNAPSISGHRPIGSISDHLRSFITRKSGKGDSQNSSDKEKNNFFENLNYDYVQVQNGNNTEALFNVLSSFKKGSMNRATVLHVCTNKTSEFINSRAPITVMHSIKKNEIFPFNVDMLSSDGQKVKSPEPTAHSQDDKMYSGKSPPTTPQQQWMFSKKTFTDVYTEEMLKYLERDKNIIFISPAMLGGSGLVKISDKYPNNVYDVGIAEQHATTFATAMAMNKNLKVHLCIYSTFMQRAYDQIIHDLNLQKVPLKVIIGRSGLVGEDGATHQGIYDLTILGALNNACVISPSNQVDLKKALKFCYHDVKRSVFVRLPRINTFTEEYLQRYFRIGEQLQGDGNVGHNRQIDWEKANKGGDPRNDDMQSFFGKARVIKMSPEKNEPREGRKKKVSIFNMGSMLFNVLNAIEEIEKDQFFSNKFSFSIIDMIFLNPMDKKIIDYLIEENKHDVHITYEDNTVGGFSTHFNNYLIEKNYISRHQLSVHNIYVPNDPIEHSTYVQQYTDVKMDSNSLVKRIKSFLQGQLSN

Target ORF information:

RefSeq Version	XM_002259939.1
Organism	Plasmodium knowlesi strain H
Definition	Plasmodium knowlesi strain H 1-deoxy-D-xylulose 5-phosphate synthase,putative partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002259939.1

ORF Insert Sequence:

ATGATAATGG GAACGCCCTC TCTCCTGTAT TTGTTCACAC TGATCATTAC CTCCATGCAT 
TTCACGGTAA ACGCCACCAG CGGAAAATGC CAAGTAAGTA GAAATGTCAT GTACCGGAAG 
CAGTTAAACA GGATTACCAC GAAAAGGTAT TATTTGTGTA AAATTTTTAA GGACAGTTTT 
CCGTGTTTTT TTGGTATCTC TGGGTATGAC CAAAATGGTA GTAGTGGCGA TCTCCTCAAG 
CGTACTGCTA TACAGTGGAA TCAGTTAAAA ATAGAAAATG AAATCTTCCA CAGGGGAAAA 
CCTTCCGATG AGGTACAAGT AGAAAGCCCA GTACAAAAAA GGAATGTCGC CCATGATGAC 
CAGCGGATAG ATAACCTTAA GGGAGCTACA AAACGGTTCA TACAGGATGG ACACCATTAC 
TCCCTTAACG CAAAGAATCC ACGCGGTGGA AGCAGTGGTA GCTGGACATA TCCACCCACG 
GAAAAAGGGC CAAATGTGTT CTTCATAAAT TATACTAATT TAAAGCAATT GAGAAAATAT 
GGCCTGAGAA AAGGGGATCC TTTTATCACA CGAAAGTCGA CATTTTTACA CACCTATGAA 
GGTAATCGAT TGGGGAATTA CTCCACCAGT GCAACTGTAG GAGAGAAGCT TTTTACAGTC 
AAGAACGAAG ACACCCAAAC GGGGAAAGAG GCGCAATTCA TCACACGTGC GAAGAAAAGC 
GATGATGCCA AGGACCCCCC CAATTTGGAT GCCATCTTTG ATCAAATAAA CAGCTATCTG 
GATATTGAAA AATATAAAGA TTCATATGGT GAAGAAGTTT ATAATCAGAT AGTTAAATTA 
TACGTACATA GGCATGTCCC CGAAAATTAC GAACAATTGT TCTTCATGGA ACAACCGCAG 
AAGAGCGTTG CATTGGACGT AGACAAATAT GATGAGGACC AATTTCAGAA ACTAATTGAA 
GAGGAATTCC AAAGAAATGG AGTCCACATA GAAAACATCA ATAAAGAATA CTACAAAAGA 
GAGAATATCA AGAAAACTCT TAAGGTCCTA AATTACTTAC CTCTACTAAA TTTAATAAAC 
AATCCAAATG ATTTGAAAAA ATTGAAGAAG GAATATCTAC CTCTATTGGC TCACGAATTA 
AAAATGTTCC TTTTTTTCAT GGTTAATCTA AGTGGTGGTC ATTTTTCCGC TGGGTTGAGC 
TTGCTAGAGG TGCAGCTGAT GTTAATGTAT CTGTTTGATC AGCCCCATGA TGATGTGATA 
TACGATATAG GCCATCAGAC CTACGTACAC AAAATACTCA CAGGGAGAAA GTTCATTTTT 
TTATCTCTAA GACAGAAAGA GGGATTATGT GGCTTTCTAA ACACATTTGA AAGCACCTAC 
GACAAGTTTG GGGCAGGCCA TAGCTCCACT GCACTGAGTG CAATTCAGGG GTTTTATGAA 
GCCGACTGGC AGGTATGTCA AAACAGAAGA AACACCAAAT CGGAAGGAAA AGAAGCACAT 
CCCTTTGAAG ACACAGAAAA TATCACTTTT ATCCAACCTG GTGGAGAAGA CCAAATCCAT 
GCAGGGGAGA ACCTTCATGC AAGTCATCCC AAGGGAGGAG GAAATCCAAC ACAACAAAGT 
TCCTACCCTG GGCGAAATAA CTTAGCTGAT CATTTGAACA AAGTGCATAT CGCCATCATT 
GGGGACGGTG GCCTAACCGG TGGTATGGCA TTGGAAGCGC TGAATTACAT TTCCTTTTTA 
AATTCTAAAG TACTAATTAT TTATAATGAC AATGGGCAGG TATCTCTCCC CACTAATGCA 
CCCAGTATCT CGGGGCATCG ACCAATCGGC TCCATCTCTG ACCATCTGCG TAGTTTTATC 
ACAAGAAAAA GTGGAAAAGG AGACAGCCAA AATTCCAGCG ATAAGGAAAA AAACAACTTT 
TTTGAAAATT TAAACTACGA CTATGTGCAA GTCCAAAACG GAAATAACAC AGAAGCCCTT 
TTCAACGTGT TGTCGTCCTT TAAAAAGGGA AGTATGAATA GAGCCACTGT ATTGCATGTC 
TGTACGAACA AAACCAGTGA GTTTATAAAC AGTAGGGCAC CGATAACTGT GATGCATTCT 
ATTAAGAAGA ACGAAATCTT TCCATTCAAT GTGGATATGC TTAGCTCAGA TGGGCAGAAA 
GTTAAGTCTC CAGAGCCCAC CGCCCATAGC CAAGATGATA AGATGTACAG TGGAAAATCC 
CCCCCCACGA CACCACAACA ACAGTGGATG TTCTCCAAGA AAACCTTCAC AGATGTGTAC 
ACAGAAGAAA TGCTAAAATA TTTGGAGAGA GATAAAAATA TCATCTTCAT TTCTCCAGCC 
ATGTTAGGGG GATCCGGATT AGTAAAGATC AGCGACAAGT ACCCCAACAA TGTATATGAC 
GTAGGAATCG CAGAACAACA CGCAACAACC TTTGCGACAG CCATGGCCAT GAATAAGAAC 
CTAAAGGTTC ACCTATGCAT TTATTCTACA TTTATGCAAA GAGCATATGA TCAAATAATA 
CATGATTTGA ATTTACAGAA GGTTCCGTTA AAGGTTATTA TCGGTAGGAG TGGCTTAGTC 
GGGGAAGATG GAGCTACTCA CCAAGGAATC TACGACCTTA CTATTTTGGG TGCCTTGAAC 
AATGCATGCG TTATATCCCC TAGCAACCAA GTGGACTTGA AGAAGGCTCT CAAGTTTTGC 
TACCATGATG TGAAACGATC TGTGTTTGTT CGCCTCCCCA GGATTAACAC CTTCACGGAG 
GAGTACCTGC AGAGGTATTT CCGCATCGGG GAGCAGCTCC AGGGAGATGG AAACGTAGGG 
CATAACAGGC AAATAGATTG GGAAAAAGCA AACAAGGGGG GAGATCCCCG CAACGACGAT 
ATGCAATCAT TCTTTGGAAA GGCGCGAGTC ATCAAAATGA GCCCAGAAAA AAATGAACCA 
AGAGAAGGAA GGAAAAAAAA AGTGTCCATT TTTAACATGG GTAGTATGCT ATTCAATGTA 
CTGAACGCTA TCGAAGAAAT CGAAAAGGAC CAATTTTTCT CCAATAAATT TTCCTTCTCA 
ATTATAGATA TGATTTTCCT AAATCCAATG GATAAAAAAA TAATAGATTA CTTAATAGAG 
GAGAATAAGC ATGACGTACA TATAACCTAC GAGGACAACA CTGTAGGTGG ATTTTCAACC 
CACTTCAATA ACTACCTAAT AGAGAAGAAT TACATTTCCA GACATCAGTT GTCTGTTCAT 
AATATTTACG TACCAAATGA TCCCATTGAA CACTCCACGT ATGTACAACA ATACACAGAT 
GTAAAAATGG ATTCTAATAG CTTAGTGAAA AGAATAAAGA GTTTCTTACA AGGACAACTG 
TCCAATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The genome of the simian and human malaria parasite Plasmodium knowlesi.
Nature455(7214)799-803(2008 Oct)
Pain A,Böhme U,Berry AE,Mungall K,Finn RD,Jackson AP,Mourier T,Mistry J,Pasini EM,Aslett MA,Balasubrammaniam S,Borgwardt K,Brooks K,Carret C,Carver TJ,Cherevach I,Chillingworth T,Clark TG,Galinski MR,Hall N,Harper D,Harris D,Hauser H,Ivens A,Janssen CS,Keane T,Larke N,Lapp S,Marti M,Moule S,Meyer IM,Ormond D,Peters N,Sanders M,Sanders S,Sargeant TJ,Simmonds M,Smith F,Squares R,Thurston S,Tivey AR,Walker D,White B,Zuiderwijk E,Churcher C,Quail MA,Cowman AF,Turner CM,Rajandream MA,Kocken CH,Thomas AW,Newbold CI,Barrell BG,Berriman M

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PKH_121650 cDNA ORF clone, Plasmodium knowlesi strain H

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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