PB000236.03.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB000236.03.0
Entrez Gene ID	3423593
Full Name	conserved Plasmodium protein, unknown function
Synonyms	PB000236.03.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_670035.2	XP_675127.2	conserved Plasmodium protein, unknown function
XM_670035.1	XP_675127.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB000236.03.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB000236.03.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm05828	XM_670035.2 Latest version!	Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_101760), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB000236.03.0 ( XM_670035.2 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_675127.2 Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_101760), partial mRNA.

Price & Availability↑

CloneID	OPm05828
Clone ID Related Accession (Same CDS sequence)	XM_670035.2
Accession Version	XM_670035.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3297bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	conserved Plasmodium protein, unknown function
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036168). On Oct 24, 2017 this sequence version replaced XM_670035.1. COMPLETENESS: incomplete on both ends.

ATGGTTATAA GGAATAAACT AGCTAATTTC CTTTTTTTTT TTTTATGTTT TTTTTTTTTT 
CATCATATTT GTGGGATACA GTACAATACT ATTCATAAGA AAAATGCACA CACAAAAAAC 
GAGCTAGTTT TTTTTAATTA TAAAGAATAC AAAAAAAAAC ATAAGCAAAT TAATGACCGG 
AAATATGATA TACTTTATTT TCCTTTAAAA TTGGACAACT TTCATAAAAA AAGGGAAATT 
GATAACATTA ATTATCACAG AAACAATAGT AATAATTCCA GCCAATATAT ATATGGCATA 
AAGTCAAAAA AAAAAAATGT GCATGAGCTT TTTTGCACTA GCTTGGTAAA AAAAAATATA 
TTTTTTATAA ATATATCAAG TAACAATGGA ATACGAAATA AATTCTATAA ATGGAGAAAT 
GAAAACAAAC AAATTTTTAC AATAAAGAAT AAATTTCACT TAAACGAAAA TGGGAAAAAG 
GAAGTGGGGA ATAAAAATGA AAATATGGAA CAAAAATGTA ACATGGGGAA AGTGAGTGAA 
ATGGACAAAG AAAAAAAAAA CAGGTTAATT GATAATATGA AAAAAAATTA CTTAAGTATA 
AAATATGTGG ATGAAAAAAA TGAAAGTAGT GATATTTCAT TAACAATAGG AATAAAAGGT 
AAACTTCGGG AATATTATTA CGATAAATGT GTAAAAGAAT ATAAAAATAT AAAATTGAAA 
GAAAATAAAT ATGAATATTC CTATTTAAAT GATGTTCCGA TTAATAATTT AATTAATTAT 
ATAGATAAAA ATGAATATTT TAAAATATTT TTAAAATATA TTAATGAAGA TATTATAAAA 
GTTTATAAAA AAATGAACAA CCTATATTTA ATAGGTGCAC CTAGGTTATT GAATAAAATT 
GATCATATAA ATATAAGTAA GTTTGATGAT ATAGTTTTAA ATTTTTCTAT TGATATATTT 
CCAATAGTAA AGTTTAACAG GCCATATATT AATTTGGATA TAGTTGTAAA GGTGCCACCA 
TATGAAAAAG GTAATACTTT TAAAGAATTT TTAAAGTATA TTAATAATGA ACTCGAAATT 
AAAATCGATA CTGATGAAAA TCACAAAGTT GATTGGAATA ATGATGTATA TATAAATGTT 
TCAAAGGGAT GGGTTTACAG TTTTAATGAT ACTTACTATG ATGAATTTTG TAGTTTAAAT 
AATTGTTTTA GTGAAAAGAA AGAAGAAGTG GAAAATTATG AAAATATTAG TATTGAGGAA 
ATAAACAAAT TTGGAAACAA CAAAATAAGC GAGTTGATAG ATGTGGATAA AGATGAAGAA 
CAATTCATAA ACAATTCAGA TTATTATAAT AAGGAAATGA AGGAAGGAAA TGATACGACT 
CCATTACTTC GCGAAGAAGA AATATATTTT AACAATACAA ACGATGATGT AAATCATTAT 
GGTAATTTGG GAAATAAAAA TTATAAAAAT TATTACAACG AACTTTTAAA AAATTCAGAA 
TATATGAATT ATTTTAAAGA AGGATATCAA TTACCTAGTG AAGCTATATC TATGGAAAAT 
ACGATTATAT CAATAAAAGA AAATTACAAT CCCATAGGTT TTAATGAATC TTTAATAGGA 
ATGGGTAAAA ATGATAAAAA AAATATCACA GTATATATAC CTGTAAATTT ATTCCAAGAT 
TATTTTAAAA ATCAACAAAA AAAAAACGAT GGGAATGATA ATATTATTGC ATTCGATAAG 
GATACAAAAA AAGACCTTGA AAATATGAAC GAAATTAGCA AAGATAGTAT AAATAAATTT 
CGAGAAATTA TTTATATGGA AATTAAAAAA TTAAAAAATA ACAAAGTTTT TGATAAACTC 
GAATCAATTT TAAAAAGTAA TGATAATAAA TTTTTTGACA ACAATAATTT GGAGAAATAT 
CTAAAAAAAG ATGAGACAAG CCCAAATGAA AATGATACTA AGGAAGAAGA AATGAGAAAA 
AAAATGAATG AAAAAAATGA TAAAACAGGG GAAATATATT ACCTTCCAAA CAAGGAAGAA 
GATATTGAAT ATATCCTTGG CAATGACAAC GAGCTTGATG AAGAAATGGA GAACAACGAA 
CTGGAAAGCA AAGAAACAAA TGTAAATGTT AGTGATGATG AATTAAACTT TAAGAAAAAT 
TTTGATAAAT ATATAGAAGA AATATTAAAA GAAAATATGA ATTCACTTGA TAAAAAAATT 
CCATCATATA ATAATGAAAA CAGTAAAACA AAAGAAATTT TTGAAAATCT TTGTGATCCT 
AATGATTATG ATAAAGTCGA TAATATTGAT GAAACATTAA ATGATTATAT ATTAGGAAAA 
AGCGATTTAA TTAAATGTGT ATTAGAAGTA AATGTAATTG ATATAAAAAT GCGAAAAAGT 
GAAACAGAAA ACATAGATGA TTATATTTTT AAAAAGTATA ATAAAACAAA AGATGAGTTA 
TATACAGAAA TTGAAAAAAG GGCAATGATA GATATTCAAA ATAAATGTGT TGAACAAAGA 
AGAATGGGAG CATATAACAA ATTAATGGAA ATAACTTCGT TAAATGTGCC TATAACTTTG 
TTTCGTGCAC AAGGAAAAAA ATTATACGCG AATTATTTAA AGAAAAAGGA GATGCAAGGC 
AAAAATATCG AGGGAAATAA TAACGGAATG GAGAAGATAC TAACATTTGA AGAGTTTATT 
AATAAATCAC AACGGGAAAT ATATGATCAA ATTAGATTTT CTTTCATAGT AAAATCTATA 
TTCCATAATT CAAAATTAAA ATTAAATTAT GATGAACTAA TAAAAGATGT TATTAAAACG 
TTAATTAAAA CCCCTACATA TAATATCAAA ACCATAATTA AACAAATATA TACTATTCAT 
CAAGCTCAAT GTGTATTAGA TTTTGTTTCC TTAAATTCAA ATATTTTACA TGAAACAGAT 
AATAGTTCAT CTGTTAATTT TTCAGTTAGT TTGAAAAAGG GATCTTCTTA TTCAAAAGAA 
GATTTTATAA ATGACGATGA TCAGGAAATT TCTAATAATA GATTTAATGA TAGGGAAGAA 
AAAAAAAATA TTGAGAAGTC AATATTGCGT GATGATAAAA TAGAAAAGGG AAATGCTGTG 
AATAATGATT TACTAAATAA TAATGAAAAG AAGAAAGAAA AGATTTTTAA TTTTAATGAC 
GAAGCAAATT TTATAGTTGA GAAAAAAAAA GAAAACGATG AAAATATTGA ACTAGAATAT 
TTCACATTTA AAAAAGGTGC TAATTATACG AAATATTTTG AGGAAAAGAG AAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_675127.2
CDS	1..3297
Translation	MVIRNKLANFLFFFLCFFFFHHICGIQYNTIHKKNAHTKNELVFFNYKEYKKKHKQINDRKYDILYFPLKLDNFHKKREIDNINYHRNNSNNSSQYIYGIKSKKKNVHELFCTSLVKKNIFFINISSNNGIRNKFYKWRNENKQIFTIKNKFHLNENGKKEVGNKNENMEQKCNMGKVSEMDKEKKNRLIDNMKKNYLSIKYVDEKNESSDISLTIGIKGKLREYYYDKCVKEYKNIKLKENKYEYSYLNDVPINNLINYIDKNEYFKIFLKYINEDIIKVYKKMNNLYLIGAPRLLNKIDHINISKFDDIVLNFSIDIFPIVKFNRPYINLDIVVKVPPYEKGNTFKEFLKYINNELEIKIDTDENHKVDWNNDVYINVSKGWVYSFNDTYYDEFCSLNNCFSEKKEEVENYENISIEEINKFGNNKISELIDVDKDEEQFINNSDYYNKEMKEGNDTTPLLREEEIYFNNTNDDVNHYGNLGNKNYKNYYNELLKNSEYMNYFKEGYQLPSEAISMENTIISIKENYNPIGFNESLIGMGKNDKKNITVYIPVNLFQDYFKNQQKKNDGNDNIIAFDKDTKKDLENMNEISKDSINKFREIIYMEIKKLKNNKVFDKLESILKSNDNKFFDNNNLEKYLKKDETSPNENDTKEEEMRKKMNEKNDKTGEIYYLPNKEEDIEYILGNDNELDEEMENNELESKETNVNVSDDELNFKKNFDKYIEEILKENMNSLDKKIPSYNNENSKTKEIFENLCDPNDYDKVDNIDETLNDYILGKSDLIKCVLEVNVIDIKMRKSETENIDDYIFKKYNKTKDELYTEIEKRAMIDIQNKCVEQRRMGAYNKLMEITSLNVPITLFRAQGKKLYANYLKKKEMQGKNIEGNNNGMEKILTFEEFINKSQREIYDQIRFSFIVKSIFHNSKLKLNYDELIKDVIKTLIKTPTYNIKTIIKQIYTIHQAQCVLDFVSLNSNILHETDNSSSVNFSVSLKKGSSYSKEDFINDDDQEISNNRFNDREEKKNIEKSILRDDKIEKGNAVNNDLLNNNEKKKEKIFNFNDEANFIVEKKKENDENIELEYFTFKKGANYTKYFEEKRK

Target ORF information:

RefSeq Version	XM_670035.2
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_101760), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_670035.2

ORF Insert Sequence:

ATGGTTATAA GGAATAAACT AGCTAATTTC CTTTTTTTTT TTTTATGTTT TTTTTTTTTT 
CATCATATTT GTGGGATACA GTACAATACT ATTCATAAGA AAAATGCACA CACAAAAAAC 
GAGCTAGTTT TTTTTAATTA TAAAGAATAC AAAAAAAAAC ATAAGCAAAT TAATGACCGG 
AAATATGATA TACTTTATTT TCCTTTAAAA TTGGACAACT TTCATAAAAA AAGGGAAATT 
GATAACATTA ATTATCACAG AAACAATAGT AATAATTCCA GCCAATATAT ATATGGCATA 
AAGTCAAAAA AAAAAAATGT GCATGAGCTT TTTTGCACTA GCTTGGTAAA AAAAAATATA 
TTTTTTATAA ATATATCAAG TAACAATGGA ATACGAAATA AATTCTATAA ATGGAGAAAT 
GAAAACAAAC AAATTTTTAC AATAAAGAAT AAATTTCACT TAAACGAAAA TGGGAAAAAG 
GAAGTGGGGA ATAAAAATGA AAATATGGAA CAAAAATGTA ACATGGGGAA AGTGAGTGAA 
ATGGACAAAG AAAAAAAAAA CAGGTTAATT GATAATATGA AAAAAAATTA CTTAAGTATA 
AAATATGTGG ATGAAAAAAA TGAAAGTAGT GATATTTCAT TAACAATAGG AATAAAAGGT 
AAACTTCGGG AATATTATTA CGATAAATGT GTAAAAGAAT ATAAAAATAT AAAATTGAAA 
GAAAATAAAT ATGAATATTC CTATTTAAAT GATGTTCCGA TTAATAATTT AATTAATTAT 
ATAGATAAAA ATGAATATTT TAAAATATTT TTAAAATATA TTAATGAAGA TATTATAAAA 
GTTTATAAAA AAATGAACAA CCTATATTTA ATAGGTGCAC CTAGGTTATT GAATAAAATT 
GATCATATAA ATATAAGTAA GTTTGATGAT ATAGTTTTAA ATTTTTCTAT TGATATATTT 
CCAATAGTAA AGTTTAACAG GCCATATATT AATTTGGATA TAGTTGTAAA GGTGCCACCA 
TATGAAAAAG GTAATACTTT TAAAGAATTT TTAAAGTATA TTAATAATGA ACTCGAAATT 
AAAATCGATA CTGATGAAAA TCACAAAGTT GATTGGAATA ATGATGTATA TATAAATGTT 
TCAAAGGGAT GGGTTTACAG TTTTAATGAT ACTTACTATG ATGAATTTTG TAGTTTAAAT 
AATTGTTTTA GTGAAAAGAA AGAAGAAGTG GAAAATTATG AAAATATTAG TATTGAGGAA 
ATAAACAAAT TTGGAAACAA CAAAATAAGC GAGTTGATAG ATGTGGATAA AGATGAAGAA 
CAATTCATAA ACAATTCAGA TTATTATAAT AAGGAAATGA AGGAAGGAAA TGATACGACT 
CCATTACTTC GCGAAGAAGA AATATATTTT AACAATACAA ACGATGATGT AAATCATTAT 
GGTAATTTGG GAAATAAAAA TTATAAAAAT TATTACAACG AACTTTTAAA AAATTCAGAA 
TATATGAATT ATTTTAAAGA AGGATATCAA TTACCTAGTG AAGCTATATC TATGGAAAAT 
ACGATTATAT CAATAAAAGA AAATTACAAT CCCATAGGTT TTAATGAATC TTTAATAGGA 
ATGGGTAAAA ATGATAAAAA AAATATCACA GTATATATAC CTGTAAATTT ATTCCAAGAT 
TATTTTAAAA ATCAACAAAA AAAAAACGAT GGGAATGATA ATATTATTGC ATTCGATAAG 
GATACAAAAA AAGACCTTGA AAATATGAAC GAAATTAGCA AAGATAGTAT AAATAAATTT 
CGAGAAATTA TTTATATGGA AATTAAAAAA TTAAAAAATA ACAAAGTTTT TGATAAACTC 
GAATCAATTT TAAAAAGTAA TGATAATAAA TTTTTTGACA ACAATAATTT GGAGAAATAT 
CTAAAAAAAG ATGAGACAAG CCCAAATGAA AATGATACTA AGGAAGAAGA AATGAGAAAA 
AAAATGAATG AAAAAAATGA TAAAACAGGG GAAATATATT ACCTTCCAAA CAAGGAAGAA 
GATATTGAAT ATATCCTTGG CAATGACAAC GAGCTTGATG AAGAAATGGA GAACAACGAA 
CTGGAAAGCA AAGAAACAAA TGTAAATGTT AGTGATGATG AATTAAACTT TAAGAAAAAT 
TTTGATAAAT ATATAGAAGA AATATTAAAA GAAAATATGA ATTCACTTGA TAAAAAAATT 
CCATCATATA ATAATGAAAA CAGTAAAACA AAAGAAATTT TTGAAAATCT TTGTGATCCT 
AATGATTATG ATAAAGTCGA TAATATTGAT GAAACATTAA ATGATTATAT ATTAGGAAAA 
AGCGATTTAA TTAAATGTGT ATTAGAAGTA AATGTAATTG ATATAAAAAT GCGAAAAAGT 
GAAACAGAAA ACATAGATGA TTATATTTTT AAAAAGTATA ATAAAACAAA AGATGAGTTA 
TATACAGAAA TTGAAAAAAG GGCAATGATA GATATTCAAA ATAAATGTGT TGAACAAAGA 
AGAATGGGAG CATATAACAA ATTAATGGAA ATAACTTCGT TAAATGTGCC TATAACTTTG 
TTTCGTGCAC AAGGAAAAAA ATTATACGCG AATTATTTAA AGAAAAAGGA GATGCAAGGC 
AAAAATATCG AGGGAAATAA TAACGGAATG GAGAAGATAC TAACATTTGA AGAGTTTATT 
AATAAATCAC AACGGGAAAT ATATGATCAA ATTAGATTTT CTTTCATAGT AAAATCTATA 
TTCCATAATT CAAAATTAAA ATTAAATTAT GATGAACTAA TAAAAGATGT TATTAAAACG 
TTAATTAAAA CCCCTACATA TAATATCAAA ACCATAATTA AACAAATATA TACTATTCAT 
CAAGCTCAAT GTGTATTAGA TTTTGTTTCC TTAAATTCAA ATATTTTACA TGAAACAGAT 
AATAGTTCAT CTGTTAATTT TTCAGTTAGT TTGAAAAAGG GATCTTCTTA TTCAAAAGAA 
GATTTTATAA ATGACGATGA TCAGGAAATT TCTAATAATA GATTTAATGA TAGGGAAGAA 
AAAAAAAATA TTGAGAAGTC AATATTGCGT GATGATAAAA TAGAAAAGGG AAATGCTGTG 
AATAATGATT TACTAAATAA TAATGAAAAG AAGAAAGAAA AGATTTTTAA TTTTAATGAC 
GAAGCAAATT TTATAGTTGA GAAAAAAAAA GAAAACGATG AAAATATTGA ACTAGAATAT 
TTCACATTTA AAAAAGGTGC TAATTATACG AAATATTTTG AGGAAAAGAG AAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB000236.03.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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