PBANKA_080870 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PBANKA_080870
Entrez Gene ID	3422568
Full Name	GTPase-activating protein, putative
Synonyms	PB101627.00.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_669043.1	XP_674135.1	hypothetical protein
XM_669043.2	XP_674135.2	GTPase-activating protein, putative

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PBANKA_080870 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PBANKA_080870 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm05078	XM_669043.2 Latest version!	Plasmodium berghei ANKA GTPase-activating protein, putative (PBANKA_080870), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PBANKA_080870 ( XM_669043.2 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_674135.2 Plasmodium berghei ANKA GTPase-activating protein, putative (PBANKA_080870), partial mRNA.

Price & Availability↑

CloneID	OPm05078
Clone ID Related Accession (Same CDS sequence)	XM_669043.2
Accession Version	XM_669043.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2676bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	GTPase-activating protein, putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036166). On Oct 24, 2017 this sequence version replaced XM_669043.1. COMPLETENESS: incomplete on both ends.

ATGAATAGCT CATCAACTCC TTGTGAAAAC ACATCAAACA ATATAAATGA CAAAGCGTTA 
GAATGTAATA AACAAAATGG AAATAAAATT GAATCTAGAA TTTGTCCAAA AGATGCACAA 
TATATATCTG AACTTATTTT AAATAAAGAT AACAAAATTG AAATAAACAA AACACAAAAT 
ATAGATTCTT ATAATTCAAC AGAAATGAGC GTATCTATTA ATAATGTATG CATAGATCAA 
GAACAAAAAA ATAAAAAATT TTCTATAAAT AATGAAACAG ATGTACCGCT ATATAATAAA 
AAAAATAATG AAGAATTTGA AACAAATTAT AATATAAATA AAAATAAAGA TATATCTCCA 
AAATTAGGAG AAAAATATTG TAAATCTATA GATGAAGAAA ATGAATATAT AGAAGATTGG 
GAAGTAATTA GAAAAAGAAT ATTTGATCCA ACATTAGGGT TAAGAAAACA TTATGCTAAA 
GAATTTTTAT CATGTGGTGA AAAATATAAT ACTCGTATTT TAGAGAAATG GTCATCTATG 
ATTGACAGAA ATATTAATTG GTTTATGAAA GCACATAAAA CAACATTTCT TAGAAGGGTA 
AAAAGAGGAA TTCCACAAAA ATATAGATGG AAAGTTTGGA TGCATATAAC AAATAGTATA 
AGTTTAATAA ATAAATTTGA AAAAAAATAT TATTATTTAT ATAAAAAAAC TTCAAATTAT 
AGTAATCTAA TATATATAGA TATATCAAGA ACATTTCCAG AATTATTAAT TTTTGATAAA 
TATGCCCAAG ACCAATTATA TCGAATATTA AATGCATATG CAAATTATGA ATCATCAGTT 
GGATATTGCC AAGGAATGAA TTTTATAGTT GGGTTATTAT TAATTGTTAG TAACTTTAAT 
GAACTTGAAA CATTTTGTAT TTTAGTAAGT TTAATGAATA ATTATCATTT AAAAAATTTC 
TATAAAGAAC AGTTTCCTTT ACTTAATAGA TTTATATATG TTTTTGAAAA AATTTTAAAG 
TTTGAAATTC CAGATTTATT TGAACATTTT AATAATGAAG AAGTACATCC ACCAGTTTAT 
TTACATCAAT GGCTTTTAAC ATTATTTATT GCGAGTTTAC CAATAAAAAG TGTTATTATT 
ATATGGGATT ATTTATTTAG TACTAGCATA AAAATGATAT TAATTATTTC AGTTGCTTTG 
TTAAAAATTT TAAAAAATTA TTTAGTTAAA AATAATTTTG AAAAAATTCT TAAATTGCTT 
AAATCGATGA AATATAATGA AAGTAATGAT GATATATTAA TTGCTAAATT GTTAATAAAA 
AAATCTGAAT TTGTTATTTT AAATACTGGA TTAGCATATA TTTTTGAAAA TATAGAAAAA 
GAAGATATCC CTTTAGATGT TAAATTTAAA TTCTCAATAA ATAATATTAC AAACTTTCAT 
TTTAAAACTG TAACTTCAAA TTATTCTAAA AATGAATTTG AAAATAATGA TGAAAACAAA 
AATAATAATA CAACCTTTTC CGATCTTGAT GGTGCTTCAT TATTAAATTT TTTTTCCACT 
AATATTTTAC CAAAAGGACA TTATAACCAA ATTAAGGAAG AAGATAAGGA ACTTAAACAA 
AATGCTAATT ATGATTTAAA GAATGTTGAA AAAACAGAAA GCCAAACGAA TATAAATGAA 
ATTTATTATA AAATGTTACG TAGTAATGAA AAAAATAAAA TAAATAATGA AAGTGATAAT 
GATTCCCCTT ATGAACAAAA ACAAAATAAT GAGAAAATTG AAGATTCGGG ATTTTACAAT 
AAAAAGGAAA ACAATATATA CAATTATGAA TTCATAAAAC ATGATCAGGA TGCTAACAAT 
TATGAATATA AAGATTTTCA AAATATTTCA AACTCTAAAA ATTTTACAAA TCAAACAACA 
GCATCAATAG TAAACACAAA TTCTGAAAAA AATGAAATAA AACAAAATAA TAATAGTTCT 
CATATTATTT ATGCTAATAG ATGTGAAGAT ACAGATTCTA AAAAAATTAA TTATGAAAAA 
TATAATTCGA TAAATGTTAA AAATGATAAA AAAAAAAAAT CAGAAAATAT CAAAAGACAT 
GCCTATTATT ATAAAAGTGA TGGTTTTTAT GATGAAAATC AAAATTGTCA AAATAATAAT 
GATAATATTT TAGCTACTAA TAATAATTAT ATTATAACAA ATAAAACTAA GCAAACACGA 
CAAAAGCTTA GCGATGATGA AAAAAGGGAT ATATGTTTTG CTCAAGAATT TAGAAAAGAA 
AATAAAAAAT CTCAAAATAA TATAATTGAT AAAACAAAAA TAAAAAATCA ATTTAAATAT 
AATGATAAAG ATATAGAACA AAATGGTGAA CAAACACAAA TATCTGATAA TAGTGAAGAG 
TTTGCATATA CAGGTACTAA TAATGATAAA GAAGAAAGTA TATTGAACAT CTCTGAATAC 
ATAAATAACA ATAGTAATGA CAATAATGAA ATGCAAAACA ATTCAGAAGA AAATGGACTG 
AGCTTTTTTA ATTTAATACA AACATATACC AAAGATAATA GTTGGTTTGA TGTATCATCT 
ATAAATAAAT ATTACAATTT TAATAAAAAA CGTTCAGATT TTGAATTAGA TAGTATGGGA 
ATTAACAAAA AAGAAAATTT TGAAGATAGC AATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_674135.2
CDS	1..2676
Translation	MNSSSTPCENTSNNINDKALECNKQNGNKIESRICPKDAQYISELILNKDNKIEINKTQNIDSYNSTEMSVSINNVCIDQEQKNKKFSINNETDVPLYNKKNNEEFETNYNINKNKDISPKLGEKYCKSIDEENEYIEDWEVIRKRIFDPTLGLRKHYAKEFLSCGEKYNTRILEKWSSMIDRNINWFMKAHKTTFLRRVKRGIPQKYRWKVWMHITNSISLINKFEKKYYYLYKKTSNYSNLIYIDISRTFPELLIFDKYAQDQLYRILNAYANYESSVGYCQGMNFIVGLLLIVSNFNELETFCILVSLMNNYHLKNFYKEQFPLLNRFIYVFEKILKFEIPDLFEHFNNEEVHPPVYLHQWLLTLFIASLPIKSVIIIWDYLFSTSIKMILIISVALLKILKNYLVKNNFEKILKLLKSMKYNESNDDILIAKLLIKKSEFVILNTGLAYIFENIEKEDIPLDVKFKFSINNITNFHFKTVTSNYSKNEFENNDENKNNNTTFSDLDGASLLNFFSTNILPKGHYNQIKEEDKELKQNANYDLKNVEKTESQTNINEIYYKMLRSNEKNKINNESDNDSPYEQKQNNEKIEDSGFYNKKENNIYNYEFIKHDQDANNYEYKDFQNISNSKNFTNQTTASIVNTNSEKNEIKQNNNSSHIIYANRCEDTDSKKINYEKYNSINVKNDKKKKSENIKRHAYYYKSDGFYDENQNCQNNNDNILATNNNYIITNKTKQTRQKLSDDEKRDICFAQEFRKENKKSQNNIIDKTKIKNQFKYNDKDIEQNGEQTQISDNSEEFAYTGTNNDKEESILNISEYINNNSNDNNEMQNNSEENGLSFFNLIQTYTKDNSWFDVSSINKYYNFNKKRSDFELDSMGINKKENFEDSN

Target ORF information:

RefSeq Version	XM_669043.2
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA GTPase-activating protein, putative (PBANKA_080870), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_669043.2

ORF Insert Sequence:

ATGAATAGCT CATCAACTCC TTGTGAAAAC ACATCAAACA ATATAAATGA CAAAGCGTTA 
GAATGTAATA AACAAAATGG AAATAAAATT GAATCTAGAA TTTGTCCAAA AGATGCACAA 
TATATATCTG AACTTATTTT AAATAAAGAT AACAAAATTG AAATAAACAA AACACAAAAT 
ATAGATTCTT ATAATTCAAC AGAAATGAGC GTATCTATTA ATAATGTATG CATAGATCAA 
GAACAAAAAA ATAAAAAATT TTCTATAAAT AATGAAACAG ATGTACCGCT ATATAATAAA 
AAAAATAATG AAGAATTTGA AACAAATTAT AATATAAATA AAAATAAAGA TATATCTCCA 
AAATTAGGAG AAAAATATTG TAAATCTATA GATGAAGAAA ATGAATATAT AGAAGATTGG 
GAAGTAATTA GAAAAAGAAT ATTTGATCCA ACATTAGGGT TAAGAAAACA TTATGCTAAA 
GAATTTTTAT CATGTGGTGA AAAATATAAT ACTCGTATTT TAGAGAAATG GTCATCTATG 
ATTGACAGAA ATATTAATTG GTTTATGAAA GCACATAAAA CAACATTTCT TAGAAGGGTA 
AAAAGAGGAA TTCCACAAAA ATATAGATGG AAAGTTTGGA TGCATATAAC AAATAGTATA 
AGTTTAATAA ATAAATTTGA AAAAAAATAT TATTATTTAT ATAAAAAAAC TTCAAATTAT 
AGTAATCTAA TATATATAGA TATATCAAGA ACATTTCCAG AATTATTAAT TTTTGATAAA 
TATGCCCAAG ACCAATTATA TCGAATATTA AATGCATATG CAAATTATGA ATCATCAGTT 
GGATATTGCC AAGGAATGAA TTTTATAGTT GGGTTATTAT TAATTGTTAG TAACTTTAAT 
GAACTTGAAA CATTTTGTAT TTTAGTAAGT TTAATGAATA ATTATCATTT AAAAAATTTC 
TATAAAGAAC AGTTTCCTTT ACTTAATAGA TTTATATATG TTTTTGAAAA AATTTTAAAG 
TTTGAAATTC CAGATTTATT TGAACATTTT AATAATGAAG AAGTACATCC ACCAGTTTAT 
TTACATCAAT GGCTTTTAAC ATTATTTATT GCGAGTTTAC CAATAAAAAG TGTTATTATT 
ATATGGGATT ATTTATTTAG TACTAGCATA AAAATGATAT TAATTATTTC AGTTGCTTTG 
TTAAAAATTT TAAAAAATTA TTTAGTTAAA AATAATTTTG AAAAAATTCT TAAATTGCTT 
AAATCGATGA AATATAATGA AAGTAATGAT GATATATTAA TTGCTAAATT GTTAATAAAA 
AAATCTGAAT TTGTTATTTT AAATACTGGA TTAGCATATA TTTTTGAAAA TATAGAAAAA 
GAAGATATCC CTTTAGATGT TAAATTTAAA TTCTCAATAA ATAATATTAC AAACTTTCAT 
TTTAAAACTG TAACTTCAAA TTATTCTAAA AATGAATTTG AAAATAATGA TGAAAACAAA 
AATAATAATA CAACCTTTTC CGATCTTGAT GGTGCTTCAT TATTAAATTT TTTTTCCACT 
AATATTTTAC CAAAAGGACA TTATAACCAA ATTAAGGAAG AAGATAAGGA ACTTAAACAA 
AATGCTAATT ATGATTTAAA GAATGTTGAA AAAACAGAAA GCCAAACGAA TATAAATGAA 
ATTTATTATA AAATGTTACG TAGTAATGAA AAAAATAAAA TAAATAATGA AAGTGATAAT 
GATTCCCCTT ATGAACAAAA ACAAAATAAT GAGAAAATTG AAGATTCGGG ATTTTACAAT 
AAAAAGGAAA ACAATATATA CAATTATGAA TTCATAAAAC ATGATCAGGA TGCTAACAAT 
TATGAATATA AAGATTTTCA AAATATTTCA AACTCTAAAA ATTTTACAAA TCAAACAACA 
GCATCAATAG TAAACACAAA TTCTGAAAAA AATGAAATAA AACAAAATAA TAATAGTTCT 
CATATTATTT ATGCTAATAG ATGTGAAGAT ACAGATTCTA AAAAAATTAA TTATGAAAAA 
TATAATTCGA TAAATGTTAA AAATGATAAA AAAAAAAAAT CAGAAAATAT CAAAAGACAT 
GCCTATTATT ATAAAAGTGA TGGTTTTTAT GATGAAAATC AAAATTGTCA AAATAATAAT 
GATAATATTT TAGCTACTAA TAATAATTAT ATTATAACAA ATAAAACTAA GCAAACACGA 
CAAAAGCTTA GCGATGATGA AAAAAGGGAT ATATGTTTTG CTCAAGAATT TAGAAAAGAA 
AATAAAAAAT CTCAAAATAA TATAATTGAT AAAACAAAAA TAAAAAATCA ATTTAAATAT 
AATGATAAAG ATATAGAACA AAATGGTGAA CAAACACAAA TATCTGATAA TAGTGAAGAG 
TTTGCATATA CAGGTACTAA TAATGATAAA GAAGAAAGTA TATTGAACAT CTCTGAATAC 
ATAAATAACA ATAGTAATGA CAATAATGAA ATGCAAAACA ATTCAGAAGA AAATGGACTG 
AGCTTTTTTA ATTTAATACA AACATATACC AAAGATAATA GTTGGTTTGA TGTATCATCT 
ATAAATAAAT ATTACAATTT TAATAAAAAA CGTTCAGATT TTGAATTAGA TAGTATGGGA 
ATTAACAAAA AAGAAAATTT TGAAGATAGC AATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PBANKA_080870 cDNA ORF clone, Plasmodium berghei ANKA

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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