| Gene Symbol | COL2A1 |
| Entrez Gene ID | 100009005 |
| Full Name | collagen type II alpha 1 chain |
| Gene Type | protein-coding |
| Organism | Oryctolagus cuniculus(rabbit) |
IVD Raw Materials
ORF » Species Summary » Oryctolagus cuniculus » COL2A1 cDNA ORF clone
| Gene Symbol | COL2A1 |
| Entrez Gene ID | 100009005 |
| Full Name | collagen type II alpha 1 chain |
| Gene Type | protein-coding |
| Organism | Oryctolagus cuniculus(rabbit) |
| mRNA | Protein | Name |
|---|---|---|
| XM_002723439.3 | XP_002723485.1 | collagen alpha-1(II) chain isoform X1 |
| NM_001195671.1 | NP_001182600.1 | collagen alpha-1(II) chain precursor |
PEP-1-SIRT2-induced matrix metalloproteinase-1 and -13 modulates type II collagen expression via ERK signaling in rabbit articular chondrocytes.
Eo SH, Choi SY, Kim SJ
Experimental cell research348(2)201-208(2016 Nov)
Combined detection of serum CTX-II and COMP concentrations in osteoarthritis model rabbits: an effective technique for early diagnosis and estimation of disease severity.
Bai B, Li Y
Journal of orthopaedic surgery and research11(1)149(2016 Nov)
Gene expression modulation in TGF-β3-mediated rabbit bone marrow stem cells using electrospun scaffolds of various stiffness.
Guo Q, Liu C, Li J, Zhu C, Yang H, Li B
Journal of cellular and molecular medicine19(7)1582-92(2015 Jul)
[Experimental study on the expression of II type collagen and MMP-7 in acetabular cartilage of developmental dysplasia of hip].
Zhang XX, Ma RX, Chen L, Li TY
Zhonghua yi xue za zhi90(9)638-41(2010 Mar)
Expression of two novel alternatively spliced COL2A1 isoforms during chondrocyte differentiation.
McAlinden A, Johnstone B, Kollar J, Kazmi N, Hering TM
Matrix biology : journal of the International Society for Matrix Biology27(3)254-66(2008 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following COL2A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL2A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OOb30596 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001195671.1 | |
| Accession Version | NM_001195671.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 4464bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1495728000000 | |
| Organism | Oryctolagus cuniculus(rabbit) | |
| Product | collagen alpha-1(II) chain precursor | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AAGW02075648.1 and AAGW02075647.1. On Sep 22, 2010 this sequence version replaced XM_002723438.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA1876818, SAMEA1876819 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGATCCGCC TCGGGGCGCC CCAGACCCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001182600.1 |
| CDS | 1..4464 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001195671.1 |
1 | ATGATCCGCC TCGGGGCGCC CCAGACCCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OOb28022 | |
| Clone ID Related Accession (Same CDS sequence) | XM_002723439.3 | |
| Accession Version | XM_002723439.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 4257bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1466524800000 | |
| Organism | Oryctolagus cuniculus(rabbit) | |
| Product | collagen alpha-1(II) chain isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003159575.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 23, 2016 this sequence version replaced XM_002723439.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryctolagus cuniculus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGATCCGCC TCGGGGCGCC CCAGACCCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_002723485.1 |
| CDS | 165..4421 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_002723439.3 |
1 | ATGATCCGCC TCGGGGCGCC CCAGACCCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PEP-1-SIRT2-induced matrix metalloproteinase-1 and -13 modulates type II collagen expression via ERK signaling in rabbit articular chondrocytes. |
Combined detection of serum CTX-II and COMP concentrations in osteoarthritis model rabbits: an effective technique for early diagnosis and estimation of disease severity. |
Gene expression modulation in TGF-β3-mediated rabbit bone marrow stem cells using electrospun scaffolds of various stiffness. |
[Experimental study on the expression of II type collagen and MMP-7 in acetabular cartilage of developmental dysplasia of hip]. |
Expression of two novel alternatively spliced COL2A1 isoforms during chondrocyte differentiation. |