Tfip11 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Tfip11
Entrez Gene ID	54723
Full Name	tuftelin interacting protein 11
Synonyms	2810002G02Rik,AF097181,AW046167,Srr1,TIP33,Tip39
General protein information	Preferred Names tuftelin interacting protein 11 Names tuftelin-interacting protein 11 STIP-1 septin and tuftelin-interacting protein 1 tuftelin-interacting protein 33 tuftelin-interacting protein 39 tuftelin-interacting protein, 39 kD
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 5 Map Location: 5\|5 F

mRNA and Protein(s)

mRNA	Protein	Name
NM_018783.4	NP_061253.2	tuftelin-interacting protein 11

Pathways from BioSystems

Homologies

Magnaporthe oryzae (rice blast fungus)	MGG_00288	XP_003718808.1
Macaca mulatta (Rhesus monkey)	TFIP11	NP_001073589.1
Bos taurus (cattle)	TFIP11	NP_001039495.2
Drosophila melanogaster (fruit fly)	sip1	NP_524725.2
Neurospora crassa	NCU06950	XP_958220.1
Pan troglodytes (chimpanzee)	TFIP11	NP_001073621.1
Danio rerio (zebrafish)	tfip11	NP_001002721.1
Canis lupus familiaris (dog)	TFIP11	NP_001073577.1
Mus musculus (house mouse)	Tfip11	NP_061253.2
Xenopus tropicalis (tropical clawed frog)	tfip11	NP_001090845.1
Schizosaccharomyces pombe (fission yeast)	SPAC1486.03c	NP_594091.1
Oryza sativa (rice)	Os12g0615800	NP_001067277.1
Gallus gallus (chicken)	TFIP11	NP_001025836.1
Caenorhabditis elegans (roundworm)	stip-1	NP_496226.2
Arabidopsis thaliana (thale cress)	AT1G17070	NP_173150.1
Arabidopsis thaliana (thale cress)	AT2G42330	NP_181762.1
Homo sapiens (human)	TFIP11	NP_001008697.1
Rattus norvegicus (Norway rat)	Tfip11	NP_001008292.1

Gene Ontology
Bibliography

Related articles in PubMed

Biphasic influence of hypoxia on tuftelin expression in mouse mesenchymal C3H10T1/2 stem cells.
Deutsch D, Silverstein N, Shilo D, Lecht S, Lazarovici P, Blumenfeld A
European journal of oral sciences119 Suppl 155-61(2011 Dec)

Identification of a novel nuclear localization signal and speckle-targeting sequence of tuftelin-interacting protein 11, a splicing factor involved in spliceosome disassembly.
Tannukit S, Crabb TL, Hertel KJ, Wen X, Jans DA, Paine ML
Biochemical and biophysical research communications390(3)1044-50(2009 Dec)

TFIP11 interacts with mDEAH9, an RNA helicase involved in spliceosome disassembly.
Wen X, Tannukit S, Paine ML
International journal of molecular sciences9(11)2105-13(2008 Nov)

Nell1-deficient mice have reduced expression of extracellular matrix proteins causing cranial and vertebral defects.
Desai J, Shannon ME, Johnson MD, Ruff DW, Hughes LA, Kerley MK, Carpenter DA, Johnson DK, Rinchik EM, Culiat CT
Human molecular genetics15(8)1329-41(2006 Apr)

A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.
McKee AE, Minet E, Stern C, Riahi S, Stiles CD, Silver PA
BMC developmental biology514(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Tfip11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tfip11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu18320	NM_018783.4 Latest version!	Mus musculus tuftelin interacting protein 11 (Tfip11), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Tfip11 ( NM_018783.4 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_061253.2 Mus musculus tuftelin interacting protein 11 (Tfip11), mRNA.

Price & Availability↑

CloneID	OMu18320
Clone ID Related Accession (Same CDS sequence)	NM_018783.4
Accession Version	NM_018783.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2517bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1569254400000
Organism	Mus musculus(house mouse)
Product	tuftelin-interacting protein 11
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AC123848.4. On Nov 17, 2006 this sequence version replaced NM_018783.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AF290474.3, AK148182.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END##

ATGTCTCTGT CCCACTTGTA CCGGGATGGC GAAGGCCACC TTGATGATGA CGATGACGAT 
GAGAGGGAGA ACTTTGAGAT CACCGACTGG GATCTCCAGA ATGAGTTCAA CCCCAACCGG 
CAGCGCCATT GGCAGACCAA AGAGGAGGCC ACCTACGGGG TGTGGGCGGA GCGAGACTCG 
GACGAGGAGA GGCCCAGCTT TGGAGGCAAA AGGGCCCGAG ACTATTCTGC ACCTGTCAAC 
TTCATCAGTG CGGGGCTCAA GAAAGGGGCG GCTGAGGAAG CGGACTCCGA GGACTCTGAT 
GCTGAAGAGA AGCCTGTTAA GCAGGAGGAC TTCCCGAAGG ATTTAGGACC AAAGAAGTTA 
AAGACGGGTG GCAATTTTAA GCCCAGCCAG AAAGGCTTTT CAGGAGGAAC CAAGTCCTTC 
ATGGACTTTG GCAGCTGGGA GAGACACACG AAAGGGATCG GGCAGAAGCT GCTGCAGAAG 
ATGGGCTACG TCCCTGGGCG TGGCCTGGGG AAGAACGCAC AGGGGATCAT CAACCCCATC 
GAAGCCAAAC AGAGAAAAGG CAAGGGAGCC GTGGGGGCCT ATGGCTCGGA GAGGACCACT 
CAGTCTCTGC AGGACTTCCC CGTGGCCGAC TCGGAAGAGG AGGCAGAAGA GGAGTTTCAG 
AAGGAGCTGA GCCAATGGAG GAAAGACCCC AGCGGGAGCA AGAAGAAGCC AAAGTACTCT 
TACAAGACTG TGGAGGAGCT GAAGGCCAAG GGCAGGGTCA GCAAGAAGCT CACAGCACCT 
CAGAAGGAAC TGTCTCAGGT CAAGGTGATC GACATGACAG GCCGGGAGCA GAAGGTGTAC 
TACAGCTACA GCCAAATCAG CCACAAGCAC AGCGTGCCCG ATGAAGGGGT GCCATTGCTG 
GCGCAGCTGC CCCCCACAGC CGGCAAGGAA GCCAGGATGC CGGGCTTTGC ACTGCCTGAG 
CTGGAGCACA ACCTGCAGCT GCTCATTGAG CGCACGGAGC AGGAGATCAT CCAGAGCGAC 
CGGCAGCTCC AGTATGAGCG GGACATGGTG GTCAGCCTGT CACACGAGCT GGAGAAGACG 
GCCGAGGTTC TTGCACATGA GGAGCGTGTC ATCTCTAACC TCAGCAAGGT GCTGGCCCTG 
GTGGAGGAAT GTGAGCGCCG CATGCAGCCC CATGGCGCCG ACCCCCTCAC TCTGGATGAG 
TGTGCCCGCA TCTTTGAGAC ACTACAGGAC AAGTATTATG AGGAGTACCG CCTGGCGGAC 
CGCGCAGACC TCGCTGTGGC CATTGTCTAC CCGCTCGTGA AGGACTACTT TAAGGATTGG 
CACCCCCTCG AGGACGGCAG CTATGGCACC CAGATCATCT CCAAGTGGAA GAGCCTCCTG 
GAGAACGACC AGCTGCTGTC TCACAGCAGC CAGGACCTGT CCTCCGATGC CTTCCACAGG 
CTCATGTGGG AGGTCTGGAT GCCTTTCGTT CGGAATGTCG TCGCCCAGTG GCAGCCACGG 
AACTGTGAGC CGATGGTGGA TTTCCTGGAC AGCTGGGCAC ACATCATCCC CGTGTGGATC 
CTGGACAATA TCCTGGACCA GCTCATCTTC CCTAAGCTGC AGAAGGAGGT GGACAACTGG 
AACCCCCTGA CAGACACCGT TCCCATCCAC TCGTGGATCC ACCCGTGGCT GCCGCTCATG 
CAGGCCCGCC TGGAGCCACT CTACTCCCCT GTGCGCAGCA AGTTGTCCAG CGCACTGCAG 
AAATGGCACC CCAGCGACGC CTCAGCCAAG CTCATCCTGC AGCCCTGGAA AGAGGTCCTC 
ACCCCTGGGT CCTGGGAGGC CTTCATGCTC AGGAACATCG TGCCCAAGCT GGGCATGTGC 
CTGGGAGAGC TTGTCATCAA CCCCCACCAG CAGCACATGG ACGCCTTCTA CTGGGTGATG 
GACTGGGAGG GGATGATCTC CGTCTCCAGC CTGGTGGGGC TGCTGGAGAA GCATTTCTTC 
CCCAAGTGGC TCCAGGTGCT GTGCTCCTGG CTCAGTAACA GTCCCAATTA CGAGGAGATC 
ACCAAGTGGT ACCTGGGCTG GAAGTCTATG TTCTCAGACC AGGTGCTGGC CCACCCTTCT 
GTCAAGGACA AGTTCAACGA AGCGCTCGAC ATAATGAACA GGGCTGTGTC CTCCAATGTT 
GGTGCCTACA TGCAGCCGGG TGCGAGAGAG AACATTGCCT ACCTCACCCA CACAGAGCGC 
AGGAAGGACT TCCAGTACGA GGCCATGCAG GAGCGCCGGG AGGCTGAGAA CATGGCACAG 
AGAGGCATCG GTGTGGCCGC CAGCTCCGTG CCCATGAACT TTAAGGACCT CATCGAGACT 
AAGGCAGAGG AGCACAACAT TGTGTTCATG CCTGTCATCG GCAAGCGGCA CGAGGGCAAG 
CAGCTCTACA CCTTCGGCCG CATCGTCATC TACATTGACC GGGGTGTGGT GTTTGTGCAG 
GGCGAGAAGA CGTGGGTGCC CACCTCCCTG CAGAGCCTCA TCGACATGGC CAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_061253.2
CDS	301..2817
Translation	MSLSHLYRDGEGHLDDDDDDERENFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAERDSDEERPSFGGKRARDYSAPVNFISAGLKKGAAEEADSEDSDAEEKPVKQEDFPKDLGPKKLKTGGNFKPSQKGFSGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGSERTTQSLQDFPVADSEEEAEEEFQKELSQWRKDPSGSKKKPKYSYKTVEELKAKGRVSKKLTAPQKELSQVKVIDMTGREQKVYYSYSQISHKHSVPDEGVPLLAQLPPTAGKEARMPGFALPELEHNLQLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTAEVLAHEERVISNLSKVLALVEECERRMQPHGADPLTLDECARIFETLQDKYYEEYRLADRADLAVAIVYPLVKDYFKDWHPLEDGSYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRLMWEVWMPFVRNVVAQWQPRNCEPMVDFLDSWAHIIPVWILDNILDQLIFPKLQKEVDNWNPLTDTVPIHSWIHPWLPLMQARLEPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLTPGSWEAFMLRNIVPKLGMCLGELVINPHQQHMDAFYWVMDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIETKAEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK

Target ORF information:

RefSeq Version	NM_018783.4
Organism	Mus musculus(house mouse)
Definition	Mus musculus tuftelin interacting protein 11 (Tfip11), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_018783.4

ORF Insert Sequence:

ATGTCTCTGT CCCACTTGTA CCGGGATGGC GAAGGCCACC TTGATGATGA CGATGACGAT 
GAGAGGGAGA ACTTTGAGAT CACCGACTGG GATCTCCAGA ATGAGTTCAA CCCCAACCGG 
CAGCGCCATT GGCAGACCAA AGAGGAGGCC ACCTACGGGG TGTGGGCGGA GCGAGACTCG 
GACGAGGAGA GGCCCAGCTT TGGAGGCAAA AGGGCCCGAG ACTATTCTGC ACCTGTCAAC 
TTCATCAGTG CGGGGCTCAA GAAAGGGGCG GCTGAGGAAG CGGACTCCGA GGACTCTGAT 
GCTGAAGAGA AGCCTGTTAA GCAGGAGGAC TTCCCGAAGG ATTTAGGACC AAAGAAGTTA 
AAGACGGGTG GCAATTTTAA GCCCAGCCAG AAAGGCTTTT CAGGAGGAAC CAAGTCCTTC 
ATGGACTTTG GCAGCTGGGA GAGACACACG AAAGGGATCG GGCAGAAGCT GCTGCAGAAG 
ATGGGCTACG TCCCTGGGCG TGGCCTGGGG AAGAACGCAC AGGGGATCAT CAACCCCATC 
GAAGCCAAAC AGAGAAAAGG CAAGGGAGCC GTGGGGGCCT ATGGCTCGGA GAGGACCACT 
CAGTCTCTGC AGGACTTCCC CGTGGCCGAC TCGGAAGAGG AGGCAGAAGA GGAGTTTCAG 
AAGGAGCTGA GCCAATGGAG GAAAGACCCC AGCGGGAGCA AGAAGAAGCC AAAGTACTCT 
TACAAGACTG TGGAGGAGCT GAAGGCCAAG GGCAGGGTCA GCAAGAAGCT CACAGCACCT 
CAGAAGGAAC TGTCTCAGGT CAAGGTGATC GACATGACAG GCCGGGAGCA GAAGGTGTAC 
TACAGCTACA GCCAAATCAG CCACAAGCAC AGCGTGCCCG ATGAAGGGGT GCCATTGCTG 
GCGCAGCTGC CCCCCACAGC CGGCAAGGAA GCCAGGATGC CGGGCTTTGC ACTGCCTGAG 
CTGGAGCACA ACCTGCAGCT GCTCATTGAG CGCACGGAGC AGGAGATCAT CCAGAGCGAC 
CGGCAGCTCC AGTATGAGCG GGACATGGTG GTCAGCCTGT CACACGAGCT GGAGAAGACG 
GCCGAGGTTC TTGCACATGA GGAGCGTGTC ATCTCTAACC TCAGCAAGGT GCTGGCCCTG 
GTGGAGGAAT GTGAGCGCCG CATGCAGCCC CATGGCGCCG ACCCCCTCAC TCTGGATGAG 
TGTGCCCGCA TCTTTGAGAC ACTACAGGAC AAGTATTATG AGGAGTACCG CCTGGCGGAC 
CGCGCAGACC TCGCTGTGGC CATTGTCTAC CCGCTCGTGA AGGACTACTT TAAGGATTGG 
CACCCCCTCG AGGACGGCAG CTATGGCACC CAGATCATCT CCAAGTGGAA GAGCCTCCTG 
GAGAACGACC AGCTGCTGTC TCACAGCAGC CAGGACCTGT CCTCCGATGC CTTCCACAGG 
CTCATGTGGG AGGTCTGGAT GCCTTTCGTT CGGAATGTCG TCGCCCAGTG GCAGCCACGG 
AACTGTGAGC CGATGGTGGA TTTCCTGGAC AGCTGGGCAC ACATCATCCC CGTGTGGATC 
CTGGACAATA TCCTGGACCA GCTCATCTTC CCTAAGCTGC AGAAGGAGGT GGACAACTGG 
AACCCCCTGA CAGACACCGT TCCCATCCAC TCGTGGATCC ACCCGTGGCT GCCGCTCATG 
CAGGCCCGCC TGGAGCCACT CTACTCCCCT GTGCGCAGCA AGTTGTCCAG CGCACTGCAG 
AAATGGCACC CCAGCGACGC CTCAGCCAAG CTCATCCTGC AGCCCTGGAA AGAGGTCCTC 
ACCCCTGGGT CCTGGGAGGC CTTCATGCTC AGGAACATCG TGCCCAAGCT GGGCATGTGC 
CTGGGAGAGC TTGTCATCAA CCCCCACCAG CAGCACATGG ACGCCTTCTA CTGGGTGATG 
GACTGGGAGG GGATGATCTC CGTCTCCAGC CTGGTGGGGC TGCTGGAGAA GCATTTCTTC 
CCCAAGTGGC TCCAGGTGCT GTGCTCCTGG CTCAGTAACA GTCCCAATTA CGAGGAGATC 
ACCAAGTGGT ACCTGGGCTG GAAGTCTATG TTCTCAGACC AGGTGCTGGC CCACCCTTCT 
GTCAAGGACA AGTTCAACGA AGCGCTCGAC ATAATGAACA GGGCTGTGTC CTCCAATGTT 
GGTGCCTACA TGCAGCCGGG TGCGAGAGAG AACATTGCCT ACCTCACCCA CACAGAGCGC 
AGGAAGGACT TCCAGTACGA GGCCATGCAG GAGCGCCGGG AGGCTGAGAA CATGGCACAG 
AGAGGCATCG GTGTGGCCGC CAGCTCCGTG CCCATGAACT TTAAGGACCT CATCGAGACT 
AAGGCAGAGG AGCACAACAT TGTGTTCATG CCTGTCATCG GCAAGCGGCA CGAGGGCAAG 
CAGCTCTACA CCTTCGGCCG CATCGTCATC TACATTGACC GGGGTGTGGT GTTTGTGCAG 
GGCGAGAAGA CGTGGGTGCC CACCTCCCTG CAGAGCCTCA TCGACATGGC CAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Biphasic influence of hypoxia on tuftelin expression in mouse mesenchymal C3H10T1/2 stem cells.
European journal of oral sciences119 Suppl 155-61(2011 Dec)
Deutsch D,Silverstein N,Shilo D,Lecht S,Lazarovici P,Blumenfeld A

Identification of a novel nuclear localization signal and speckle-targeting sequence of tuftelin-interacting protein 11, a splicing factor involved in spliceosome disassembly.
Biochemical and biophysical research communications390(3)1044-50(2009 Dec)
Tannukit S,Crabb TL,Hertel KJ,Wen X,Jans DA,Paine ML

TFIP11 interacts with mDEAH9, an RNA helicase involved in spliceosome disassembly.
International journal of molecular sciences9(11)2105-13(2008 Nov)
Wen X,Tannukit S,Paine ML

Nell1-deficient mice have reduced expression of extracellular matrix proteins causing cranial and vertebral defects.
Human molecular genetics15(8)1329-41(2006 Apr)
Desai J,Shannon ME,Johnson MD,Ruff DW,Hughes LA,Kerley MK,Carpenter DA,Johnson DK,Rinchik EM,Culiat CT

A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.
BMC developmental biology514(2005 Jul)
McKee AE,Minet E,Stern C,Riahi S,Stiles CD,Silver PA

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Tfip11 cDNA ORF clone, Mus musculus(house mouse)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

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