LINJ_13_1580 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_13_1580
Entrez Gene ID	5067555
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001464135.2	XP_001464172.2	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_13_1580 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_13_1580 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc01368	XM_001464135.2 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_13_1580 ( XM_001464135.2 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001464172.2 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc01368
Clone ID Related Accession (Same CDS sequence)	XM_001464135.2
Accession Version	XM_001464135.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2838bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009397). On Jul 14, 2011 this sequence version replaced XM_001464135.1. COMPLETENESS: incomplete on both ends.

ATGTCCACGC TCTCCTACCA GCGGCAGTAC CAGCAGATCC TGGCGGATCT GGCCGAGGTA 
CAGCGCGAGG ATGTGTACGT GAGCGCCCTG CGCGTCCCTA TGGATGCCAA AGCACGGCAT 
GCGTACTACG CGCAGTACTG GCTCTCCCTC TACGTGCGGT ACGTGCGGCT GGCGCGGCAG 
ATTGCCGTCA TCCATGACAC GGAGCTTCAG CCACAGCGCC GCGGTGATGT GCGCACACTA 
CTGGACAGCT GTCTTGGACG CATGCTCGAG GCGCGTCATA ATATTGTTGA GCACTGCGGC 
GACTATGTGG CGCTGGACGA CACCCTCGAG GAGATGAGGC TGTCCCCGGA GGATCTGGAG 
CCGCCGCTGC CAACGTACCT GCTTGAGGAC CGCCGCGAGG TTCTGCTGCA GGAGCGGGCG 
TACGTCTTGT CTCTGCAGCA GCACTACAAG GAAACGGCGC CTGGGGTGGC CCCGGTGGCG 
CTCGCGGCAG CCGCGCACAG CGCGGCACTT TTCGCTGAGG ACCCCACTAA AGCTCTGCCC 
CCGTTTCCCA CCACTGCGGA GAAGTCACCG GCGACGGCAG ATGGCGACAC GGCGCCGATG 
TCTGTCGAGG AGGCTGTACG CATCCTGCAA CTCGCTGAGC GCGGTCGTCA AGCTCGGCAG 
CTGGCAAAGA TCCAGCTGCA GCTCTTCCGT CAGCAGCAGT ACGCCGCCGC GCATGGGGCA 
GAGCTGCAGT CTCTGACGGG CAAGGATCGT GCGGCGACCA TCGTACAGAA GGTGGCTCTT 
GGCTACCTTC AGCAGAAGCG TGCCAAGGAG CGGTACCAAC AGGAGCAGGA GCTTCTGGGG 
ATGACCAGCA CGGCGGCCGT TCGCGGTAAC GCGGCAAGAG TTGCCGCCAG CATCCACCAC 
GACGATCGCA AGGCGCGGCA GCGAGTGAAC CAGGCGGAGC TGCTGCAGAA GATGCTTGAG 
ATGAACCGCC AGTTGAAAAG CCAGGAAGGG CCCAAGACGC TTGAGGTGAT GCTCGACGAA 
GTGCTGATGC ACATGGCCTA CGCACGCCTC GATGGGAAGG CTAAGAACGG CATTATGGAC 
GTTCCCACAG TGGAGGACGG AGGCACATTG ACACTGCTCG GCCGCAGCAC TCGCAAGGCT 
GGATCGGCTG GCGCGTCTGT TGGATCTGAG GCAAGCGGCA GTGAGAAGGC AAGCCTTAAC 
GGGACGGGCT ACGGTGGCCG CTCGGTATCT CGTGTGTCCG AAAGTGTCGA AGCCACCAAT 
GCTACTGCAC AGGGCGGCCC ACGTAAATCC TTTCGTCGCC CAGGCAATGG CGATGCCGCC 
GCTTCTGCCT CGACAGCCGC ACCGCCCAGC GTCTTCCTCG ATCACGTCTC CGCCACAACC 
GAGCGGCACA ACACGCTCTG GAAGGAGCAG TTCCACCGCA CCCGCGTGGA GAAGGGCGAC 
CTGGATCAGC CCTATGACGA GGCTTTGCTG AGGCGGGAGC TGCTGGATGG CCCCCGCGGC 
ATTATGCAGG ATCTGCGCCA GTGCGTCGAC CAGCTCGTGA TGATGGAGGT GAACAACCTC 
AAGGAACGTC TCGAGGCGGA GAAGAACGCT GGCAAGAGGA AGAAGGGCGG CCGAAAGGGT 
AAGAAGGCGA AGGCCGCCAA AAAGCCGAAG CTGCGCGACC CGACCAAGGG CGAAGATTTG 
GAGTCCTACC TCAACACCAC CGTCTACGAG AACAAGCTGC AGCTGCCGCC GCCGGATGTG 
CGGCTTTCGT CCTTCGTCGG CCCCCTTGGC GTCACGGCCG GGCCGCTGGA TCGCCTGCTG 
CGCACGCAGA CCGTTGATAA GGAGATCGAG AAGAAGTGGA AGCGTGTGCT GCGCGGGTGG 
AACGACGACG TGCAACACGC GATCGGGATG CCGAAGGAGA AGATGGAGAC GCTCTTCAAA 
GCGTACGCGC AGCCGTCCTC GTGGCTGAAG GACCCGTCTG CCGCCGAGGT GCGCGCCGCC 
GTCACCGACT ACGCGGTGCT GCCTCTGGGG TCGCAGGTGG TGCACGACCT GGCCCCGCAC 
CCGACAGGGC TGTTGCTCTA CGGTGCACCC GGCTCTGGAA AGACCCTCCT CGCCTATGCC 
ATCGCCAACG AGAGTGGTGC TCGCTTCTTC AATCTGTCGC CTGCTAACTT CCTCACCACC 
AAGGGTATTG CCAAGATGGT GCAGGTCGTC TTCTACACGG CACGCATGAA GGGGCCATCG 
GTGATTTACA TAGACCGCAT CGAGAAGATC TTTCCTGGGA AGGGCGGCAA GCGAGGGAAG 
AAGAAGGACG GCGAGCTGAC GCGTGGAAAG AAGCTGAAGA AGGAGCTGCT CAAGGGCATC 
GCAAGTCTGC AGCCAACAGA TCGTGTTTTG GTAGTGGCCA CGTCGACGGA GCCGTGGTGT 
GCCGACACCG CCGCCCTGTG CAACATCTTT CAGCGAGCCG TGCACCTCGC CGCCCCCGAC 
TTTGCGACCC GTGAGGCGCT GCTGAAAACC TTCATCAAGG CGCGGCTGGA TACGGTTCAC 
TCCACCGCCG TCACCCCTGC AGCAGAGGCA TCCATCGCGG AAGCCATCCG CCACGTCTCC 
CTGCTCACGG ATGGCCTCTC CGCTGGCCAG CTGCGCGACT GCGTCACGCA GACGCTCACT 
GCCCACCGGA TGGAGCGGCT GGCCCATAAC CCGATCGCAG CTGAGGAGTT TGTCCCTGCG 
CTGGCCGTCA CGACTGGACT GAACGCTGCT CAGGTGCAGC GTTACCATGA CTTCCAAGCG 
TCGCTGCCGG TGATGATGCG GCGCGCCAAC GCCGTTGAGG ACTTTAAGCC ATCCGAGGAT 
GAGGCGAAGC ACCGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001464172.2
CDS	1..2838
Translation	MSTLSYQRQYQQILADLAEVQREDVYVSALRVPMDAKARHAYYAQYWLSLYVRYVRLARQIAVIHDTELQPQRRGDVRTLLDSCLGRMLEARHNIVEHCGDYVALDDTLEEMRLSPEDLEPPLPTYLLEDRREVLLQERAYVLSLQQHYKETAPGVAPVALAAAAHSAALFAEDPTKALPPFPTTAEKSPATADGDTAPMSVEEAVRILQLAERGRQARQLAKIQLQLFRQQQYAAAHGAELQSLTGKDRAATIVQKVALGYLQQKRAKERYQQEQELLGMTSTAAVRGNAARVAASIHHDDRKARQRVNQAELLQKMLEMNRQLKSQEGPKTLEVMLDEVLMHMAYARLDGKAKNGIMDVPTVEDGGTLTLLGRSTRKAGSAGASVGSEASGSEKASLNGTGYGGRSVSRVSESVEATNATAQGGPRKSFRRPGNGDAAASASTAAPPSVFLDHVSATTERHNTLWKEQFHRTRVEKGDLDQPYDEALLRRELLDGPRGIMQDLRQCVDQLVMMEVNNLKERLEAEKNAGKRKKGGRKGKKAKAAKKPKLRDPTKGEDLESYLNTTVYENKLQLPPPDVRLSSFVGPLGVTAGPLDRLLRTQTVDKEIEKKWKRVLRGWNDDVQHAIGMPKEKMETLFKAYAQPSSWLKDPSAAEVRAAVTDYAVLPLGSQVVHDLAPHPTGLLLYGAPGSGKTLLAYAIANESGARFFNLSPANFLTTKGIAKMVQVVFYTARMKGPSVIYIDRIEKIFPGKGGKRGKKKDGELTRGKKLKKELLKGIASLQPTDRVLVVATSTEPWCADTAALCNIFQRAVHLAAPDFATREALLKTFIKARLDTVHSTAVTPAAEASIAEAIRHVSLLTDGLSAGQLRDCVTQTLTAHRMERLAHNPIAAEEFVPALAVTTGLNAAQVQRYHDFQASLPVMMRRANAVEDFKPSEDEAKHR

Target ORF information:

RefSeq Version	XM_001464135.2
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001464135.2

ORF Insert Sequence:

ATGTCCACGC TCTCCTACCA GCGGCAGTAC CAGCAGATCC TGGCGGATCT GGCCGAGGTA 
CAGCGCGAGG ATGTGTACGT GAGCGCCCTG CGCGTCCCTA TGGATGCCAA AGCACGGCAT 
GCGTACTACG CGCAGTACTG GCTCTCCCTC TACGTGCGGT ACGTGCGGCT GGCGCGGCAG 
ATTGCCGTCA TCCATGACAC GGAGCTTCAG CCACAGCGCC GCGGTGATGT GCGCACACTA 
CTGGACAGCT GTCTTGGACG CATGCTCGAG GCGCGTCATA ATATTGTTGA GCACTGCGGC 
GACTATGTGG CGCTGGACGA CACCCTCGAG GAGATGAGGC TGTCCCCGGA GGATCTGGAG 
CCGCCGCTGC CAACGTACCT GCTTGAGGAC CGCCGCGAGG TTCTGCTGCA GGAGCGGGCG 
TACGTCTTGT CTCTGCAGCA GCACTACAAG GAAACGGCGC CTGGGGTGGC CCCGGTGGCG 
CTCGCGGCAG CCGCGCACAG CGCGGCACTT TTCGCTGAGG ACCCCACTAA AGCTCTGCCC 
CCGTTTCCCA CCACTGCGGA GAAGTCACCG GCGACGGCAG ATGGCGACAC GGCGCCGATG 
TCTGTCGAGG AGGCTGTACG CATCCTGCAA CTCGCTGAGC GCGGTCGTCA AGCTCGGCAG 
CTGGCAAAGA TCCAGCTGCA GCTCTTCCGT CAGCAGCAGT ACGCCGCCGC GCATGGGGCA 
GAGCTGCAGT CTCTGACGGG CAAGGATCGT GCGGCGACCA TCGTACAGAA GGTGGCTCTT 
GGCTACCTTC AGCAGAAGCG TGCCAAGGAG CGGTACCAAC AGGAGCAGGA GCTTCTGGGG 
ATGACCAGCA CGGCGGCCGT TCGCGGTAAC GCGGCAAGAG TTGCCGCCAG CATCCACCAC 
GACGATCGCA AGGCGCGGCA GCGAGTGAAC CAGGCGGAGC TGCTGCAGAA GATGCTTGAG 
ATGAACCGCC AGTTGAAAAG CCAGGAAGGG CCCAAGACGC TTGAGGTGAT GCTCGACGAA 
GTGCTGATGC ACATGGCCTA CGCACGCCTC GATGGGAAGG CTAAGAACGG CATTATGGAC 
GTTCCCACAG TGGAGGACGG AGGCACATTG ACACTGCTCG GCCGCAGCAC TCGCAAGGCT 
GGATCGGCTG GCGCGTCTGT TGGATCTGAG GCAAGCGGCA GTGAGAAGGC AAGCCTTAAC 
GGGACGGGCT ACGGTGGCCG CTCGGTATCT CGTGTGTCCG AAAGTGTCGA AGCCACCAAT 
GCTACTGCAC AGGGCGGCCC ACGTAAATCC TTTCGTCGCC CAGGCAATGG CGATGCCGCC 
GCTTCTGCCT CGACAGCCGC ACCGCCCAGC GTCTTCCTCG ATCACGTCTC CGCCACAACC 
GAGCGGCACA ACACGCTCTG GAAGGAGCAG TTCCACCGCA CCCGCGTGGA GAAGGGCGAC 
CTGGATCAGC CCTATGACGA GGCTTTGCTG AGGCGGGAGC TGCTGGATGG CCCCCGCGGC 
ATTATGCAGG ATCTGCGCCA GTGCGTCGAC CAGCTCGTGA TGATGGAGGT GAACAACCTC 
AAGGAACGTC TCGAGGCGGA GAAGAACGCT GGCAAGAGGA AGAAGGGCGG CCGAAAGGGT 
AAGAAGGCGA AGGCCGCCAA AAAGCCGAAG CTGCGCGACC CGACCAAGGG CGAAGATTTG 
GAGTCCTACC TCAACACCAC CGTCTACGAG AACAAGCTGC AGCTGCCGCC GCCGGATGTG 
CGGCTTTCGT CCTTCGTCGG CCCCCTTGGC GTCACGGCCG GGCCGCTGGA TCGCCTGCTG 
CGCACGCAGA CCGTTGATAA GGAGATCGAG AAGAAGTGGA AGCGTGTGCT GCGCGGGTGG 
AACGACGACG TGCAACACGC GATCGGGATG CCGAAGGAGA AGATGGAGAC GCTCTTCAAA 
GCGTACGCGC AGCCGTCCTC GTGGCTGAAG GACCCGTCTG CCGCCGAGGT GCGCGCCGCC 
GTCACCGACT ACGCGGTGCT GCCTCTGGGG TCGCAGGTGG TGCACGACCT GGCCCCGCAC 
CCGACAGGGC TGTTGCTCTA CGGTGCACCC GGCTCTGGAA AGACCCTCCT CGCCTATGCC 
ATCGCCAACG AGAGTGGTGC TCGCTTCTTC AATCTGTCGC CTGCTAACTT CCTCACCACC 
AAGGGTATTG CCAAGATGGT GCAGGTCGTC TTCTACACGG CACGCATGAA GGGGCCATCG 
GTGATTTACA TAGACCGCAT CGAGAAGATC TTTCCTGGGA AGGGCGGCAA GCGAGGGAAG 
AAGAAGGACG GCGAGCTGAC GCGTGGAAAG AAGCTGAAGA AGGAGCTGCT CAAGGGCATC 
GCAAGTCTGC AGCCAACAGA TCGTGTTTTG GTAGTGGCCA CGTCGACGGA GCCGTGGTGT 
GCCGACACCG CCGCCCTGTG CAACATCTTT CAGCGAGCCG TGCACCTCGC CGCCCCCGAC 
TTTGCGACCC GTGAGGCGCT GCTGAAAACC TTCATCAAGG CGCGGCTGGA TACGGTTCAC 
TCCACCGCCG TCACCCCTGC AGCAGAGGCA TCCATCGCGG AAGCCATCCG CCACGTCTCC 
CTGCTCACGG ATGGCCTCTC CGCTGGCCAG CTGCGCGACT GCGTCACGCA GACGCTCACT 
GCCCACCGGA TGGAGCGGCT GGCCCATAAC CCGATCGCAG CTGAGGAGTT TGTCCCTGCG 
CTGGCCGTCA CGACTGGACT GAACGCTGCT CAGGTGCAGC GTTACCATGA CTTCCAAGCG 
TCGCTGCCGG TGATGATGCG GCGCGCCAAC GCCGTTGAGG ACTTTAAGCC ATCCGAGGAT 
GAGGCGAAGC ACCGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_13_1580 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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