cyc cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	cyc
Entrez Gene ID	40162
Full Name	cycle
Synonyms	BMAL1,Bmal1,CG8727,CYC,CYCLE,Cyc,Cycle,Dmel\CG8727,MOP3,Mop3,TGO_CYC,bHLHe7,bMAL1,dBMAL,dBMAL1,dBma1,dBmal,dCYC,dbmal,dbmal1
General protein information	Preferred Names cycle Names CG8727 gene product from transcript CG8727-RA CG8727-PA brain and muscle ARNT-like 1 cyc-PA
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 76C6-76C6

mRNA and Protein(s)

mRNA	Protein	Name
NM_079444.3	NP_524168.2	cycle

Pathways from BioSystems

Homologies

Macaca mulatta (Rhesus monkey)	ARNTL	XP_002799675.1
Mus musculus (house mouse)	Arntl	NP_031515.1
Gallus gallus (chicken)	ARNTL	NP_001001463.1
Homo sapiens (human)	ARNTL	NP_001169.3
Pan troglodytes (chimpanzee)	ARNTL	XP_001171687.3
Drosophila melanogaster (fruit fly)	cyc	NP_524168.2
Canis lupus familiaris (dog)	ARNTL	XP_005633740.1
Bos taurus (cattle)	ARNTL	NP_001178099.1
Rattus norvegicus (Norway rat)	Arntl	NP_077338.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005655	XP_556301.3
Xenopus tropicalis (tropical clawed frog)	arntl	XP_002936788.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cyc gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cyc cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa19017	NM_079444.3 Latest version!	Drosophila melanogaster cycle (cyc), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cyc ( NM_079444.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_524168.2 Drosophila melanogaster cycle (cyc), mRNA.

Price & Availability↑

CloneID	OFa19017
Clone ID Related Accession (Same CDS sequence)	NM_079444.3
Accession Version	NM_079444.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	cycle
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_079444.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGAAGTTC AGGAGTTCTG CGAAAATATG GAGGAGATCG AAGATGAAAA CTACGACGAG 
GAGAAGTCAG CTAGAACCTC GGATGAAAAT CGCAAGCAAA ATCACAGCGA GATCGAGAAG 
CGGCGTCGGG ACAAGATGAA CACGTACATC AACGAGCTCT CCTCCATGAT TCCCATGTGC 
TTTGCGATGC AGCGAAAGCT GGACAAACTG ACTGTGCTCC GGATGGCAGT GCAGCATCTG 
CGAGGGATCC GTGGCAGCGG CAGCTTACAT CCATTCAACG GATCCGATTA CCGGCCTAGC 
TTCCTGTCCG ACCAGGAGCT CAAGATGATT ATCCTGCAAG CGTCGGAGGG ATTCCTGTTC 
GTGGTGGGTT GTGACCGAGG ACGCATCCTG TACGTTTCCG ATTCGGTGTC CAGTGTGCTG 
AACAGCACCC AAGCGGACCT GCTGGGACAG AGCTGGTTCG ACGTCCTGCA TCCGAAGGAC 
ATAGGCAAGG TTAAGGAGCA GCTATCCTCA CTGGAACAGT GTCCCAGGGA AAGGCTTATC 
GATGCGAAGA CCATGTTGCC CGTTAAGACC GACGTTCCAC AGAGCTTGTG CCGCCTGTGT 
CCGGGTGCCC GGCGCTCCTT CTTCTGCCGC ATGAAGCTGC GCACTGCCAG CAACAACCAG 
ATCAAGGAGG AGTCCGATAC GTCCTCCAGC TCCCGGAGCT CCACGAAGCG CAAGTCCAGA 
CTGACTACGG GCCACAAGTA CCGGGTTATC CAGTGCACGG GCTACCTCAA GTCCTGGACA 
CCCATCAAGG ACGAGGACCA GGACGCCGAC AGCGACGAGC AAACAACGAA TCTATCCTGC 
CTTGTGGCAA TTGGTCGCAT TCCGCCCAAC GTTCGCAACT CCACAGTACC CGCCTCGCTG 
GACAATCACC CGAACATACG GCACGTGCTC TTCATCTCGC GCCACTCCGG CGAGGGCAAG 
TTCCTGTTCA TAGACCAGCG TGCCACCCTC GTGATTGGTT TCCTGCCTCA GGAGATCCTC 
GGCACCAGCT TCTACGAGTA CTTCCACAAC GAAGACATCG CTGCGCTGAT GGAGTCTCAC 
AAGATGGTGA TGCAGGTGCC GGAAAAGGTG ACCACTCAGG TCTACCGCTT CCGGTGCAAG 
GACAACAGCT ACATTCAGCT GCAGAGCGAG TGGCGGGCCT TCAAGAATCC CTGGACGAGC 
GAGATTGACT ATATAATCGC CAAGAATTCC GTGTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_524168.2
CDS	165..1406
Translation	MEVQEFCENMEEIEDENYDEEKSARTSDENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIRGSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGARRSFFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIKDEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTSEIDYIIAKNSVFL

Target ORF information:

RefSeq Version	NM_079444.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster cycle (cyc), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_079444.3

ORF Insert Sequence:

ATGGAAGTTC AGGAGTTCTG CGAAAATATG GAGGAGATCG AAGATGAAAA CTACGACGAG 
GAGAAGTCAG CTAGAACCTC GGATGAAAAT CGCAAGCAAA ATCACAGCGA GATCGAGAAG 
CGGCGTCGGG ACAAGATGAA CACGTACATC AACGAGCTCT CCTCCATGAT TCCCATGTGC 
TTTGCGATGC AGCGAAAGCT GGACAAACTG ACTGTGCTCC GGATGGCAGT GCAGCATCTG 
CGAGGGATCC GTGGCAGCGG CAGCTTACAT CCATTCAACG GATCCGATTA CCGGCCTAGC 
TTCCTGTCCG ACCAGGAGCT CAAGATGATT ATCCTGCAAG CGTCGGAGGG ATTCCTGTTC 
GTGGTGGGTT GTGACCGAGG ACGCATCCTG TACGTTTCCG ATTCGGTGTC CAGTGTGCTG 
AACAGCACCC AAGCGGACCT GCTGGGACAG AGCTGGTTCG ACGTCCTGCA TCCGAAGGAC 
ATAGGCAAGG TTAAGGAGCA GCTATCCTCA CTGGAACAGT GTCCCAGGGA AAGGCTTATC 
GATGCGAAGA CCATGTTGCC CGTTAAGACC GACGTTCCAC AGAGCTTGTG CCGCCTGTGT 
CCGGGTGCCC GGCGCTCCTT CTTCTGCCGC ATGAAGCTGC GCACTGCCAG CAACAACCAG 
ATCAAGGAGG AGTCCGATAC GTCCTCCAGC TCCCGGAGCT CCACGAAGCG CAAGTCCAGA 
CTGACTACGG GCCACAAGTA CCGGGTTATC CAGTGCACGG GCTACCTCAA GTCCTGGACA 
CCCATCAAGG ACGAGGACCA GGACGCCGAC AGCGACGAGC AAACAACGAA TCTATCCTGC 
CTTGTGGCAA TTGGTCGCAT TCCGCCCAAC GTTCGCAACT CCACAGTACC CGCCTCGCTG 
GACAATCACC CGAACATACG GCACGTGCTC TTCATCTCGC GCCACTCCGG CGAGGGCAAG 
TTCCTGTTCA TAGACCAGCG TGCCACCCTC GTGATTGGTT TCCTGCCTCA GGAGATCCTC 
GGCACCAGCT TCTACGAGTA CTTCCACAAC GAAGACATCG CTGCGCTGAT GGAGTCTCAC 
AAGATGGTGA TGCAGGTGCC GGAAAAGGTG ACCACTCAGG TCTACCGCTT CCGGTGCAAG 
GACAACAGCT ACATTCAGCT GCAGAGCGAG TGGCGGGCCT TCAAGAATCC CTGGACGAGC 
GAGATTGACT ATATAATCGC CAAGAATTCC GTGTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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cyc cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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