Cdk9 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Cdk9
Entrez Gene ID	37586
Full Name	Cyclin-dependent kinase 9
Synonyms	CDK9,CG5179,Dmel\CG5179,P-TEF,P-TEFb,PTefb,cdk9
General protein information	Preferred Names Cyclin-dependent kinase 9 Names CG5179 gene product from transcript CG5179-RA CG5179-PA Cdk9-PA Cyclin-dependent kinase9 2.7 p43 PITALRE positive transcription elongation factor b positive transcription elongation factor b, small subunit
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 58F2-58F3

mRNA and Protein(s)

mRNA	Protein	Name
NM_057878.4	NP_477226.2	Cyclin-dependent kinase 9

Pathways from BioSystems

Homologies

Macaca mulatta (Rhesus monkey)	CDK9	XP_001094626.1
Mus musculus (house mouse)	Cdk9	NP_570930.1
Gallus gallus (chicken)	CDK9	NP_001006201.1
Caenorhabditis elegans (roundworm)	cdk-9	NP_492906.2
Schizosaccharomyces pombe (fission yeast)	cdk9	NP_595616.1
Homo sapiens (human)	CDK9	NP_001252.1
Pan troglodytes (chimpanzee)	CDK9	XP_520277.2
Danio rerio (zebrafish)	cdk9	NP_997756.1
Rattus norvegicus (Norway rat)	Cdk9	NP_001007744.1
Canis lupus familiaris (dog)	CDK9	XP_003639361.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008541	XP_314652.2
Drosophila melanogaster (fruit fly)	Cdk9	NP_477226.2
Xenopus tropicalis (tropical clawed frog)	cdk9	NP_001005448.1
Bos taurus (cattle)	CDK9	NP_001014935.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Cdk9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cdk9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa10955	NM_057878.4 Latest version!	Drosophila melanogaster Cyclin-dependent kinase 9 (Cdk9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Cdk9 ( NM_057878.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_477226.2 Drosophila melanogaster Cyclin-dependent kinase 9 (Cdk9), mRNA.

Price & Availability↑

CloneID	OFa10955
Clone ID Related Accession (Same CDS sequence)	NM_057878.4
Accession Version	NM_057878.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1215bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	Cyclin-dependent kinase 9
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_057878.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCGCACA TGTCCCACAT GCTCCAGCAG CCTTCGGGGT CGACGCCCTC CAACGTGGGC 
TCCAGCTCAT CGCGCACGAT GTCCCTGATG GAGAAACAAA AGTACATCGA GGACTACGAC 
TTTCCCTACT GCGACGAGAG CAACAAATAC GAAAAGGTGG CGAAAATTGG CCAAGGCACC 
TTCGGAGAGG TTTTTAAGGC TCGCGAGAAA AAGGGCAACA AGAAGTTTGT GGCCATGAAG 
AAGGTGCTGA TGGACAACGA AAAGGAGGGC TTTCCCATCA CGGCTCTGCG AGAGATCCGC 
ATCCTGCAGC TGCTAAAGCA CGAGAACGTG GTGAATCTGA TCGAGATCTG CCGCACCAAG 
GCCACCGCCA CGAATGGTTA CAGATCCACC TTCTATTTGG TCTTTGATTT CTGCGAACAC 
GATTTGGCAG GTCTTCTGTC CAACATGAAC GTCAAGTTCA GTCTGGGCGA GATTAAGAAG 
GTTATGCAGC AGCTTTTAAA CGGTTTGTAT TACATCCACA GCAACAAGAT CCTGCACCGA 
GACATGAAAG CTGCCAACGT GCTGATTACC AAGCATGGCA TCTTAAAGCT GGCTGACTTT 
GGCTTGGCCC GTGCTTTTAG CATTCCAAAG AACGAGAGTA AGAATCGCTA TACCAATCGC 
GTAGTAACCT TGTGGTACCG GCCGCCTGAG CTGCTACTTG GTGACCGCAA CTATGGTCCA 
CCCGTGGACA TGTGGGGAGC CGGCTGCATA ATGGCCGAGA TGTGGACACG CTCGCCCATC 
ATGCAAGGCA ATACGGAGCA GCAGCAGCTA ACCTTTATCT CGCAGCTATG CGGCTCCTTT 
ACGCCGGACG TGTGGCCGGG AGTGGAGGAG CTGGAGCTGT ACAAATCCAT CGAGCTGCCA 
AAGAACCAGA AGCGTCGAGT CAAGGAGCGC CTGCGTCCGT ATGTCAAGGA TCAAACCGGC 
TGTGATCTAT TGGACAAATT GCTGACCCTT GATCCCAAGA AACGCATCGA TGCGGACACA 
GCTCTGAATC ACGACTTCTT CTGGACGGAT CCCATGCCCA GCGACTTGAG CAAGATGCTG 
TCCCAGCACC TGCAGAGCAT GTTCGAGTAC CTGGCGCAGC CACGCCGCAG CAACCAGATG 
CGCAACTATC ACCAGCAACT GACCACCATG AACCAGAAGC CCCAGGACAA CAGTATGATT 
GACCGGGTTT GGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_477226.2
CDS	138..1352
Translation	MAHMSHMLQQPSGSTPSNVGSSSSRTMSLMEKQKYIEDYDFPYCDESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQLLKHENVVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYIHSNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNYGPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELPKNQKRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDLSKMLSQHLQSMFEYLAQPRRSNQMRNYHQQLTTMNQKPQDNSMIDRVW

Target ORF information:

RefSeq Version	NM_057878.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster Cyclin-dependent kinase 9 (Cdk9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_057878.4

ORF Insert Sequence:

ATGGCGCACA TGTCCCACAT GCTCCAGCAG CCTTCGGGGT CGACGCCCTC CAACGTGGGC 
TCCAGCTCAT CGCGCACGAT GTCCCTGATG GAGAAACAAA AGTACATCGA GGACTACGAC 
TTTCCCTACT GCGACGAGAG CAACAAATAC GAAAAGGTGG CGAAAATTGG CCAAGGCACC 
TTCGGAGAGG TTTTTAAGGC TCGCGAGAAA AAGGGCAACA AGAAGTTTGT GGCCATGAAG 
AAGGTGCTGA TGGACAACGA AAAGGAGGGC TTTCCCATCA CGGCTCTGCG AGAGATCCGC 
ATCCTGCAGC TGCTAAAGCA CGAGAACGTG GTGAATCTGA TCGAGATCTG CCGCACCAAG 
GCCACCGCCA CGAATGGTTA CAGATCCACC TTCTATTTGG TCTTTGATTT CTGCGAACAC 
GATTTGGCAG GTCTTCTGTC CAACATGAAC GTCAAGTTCA GTCTGGGCGA GATTAAGAAG 
GTTATGCAGC AGCTTTTAAA CGGTTTGTAT TACATCCACA GCAACAAGAT CCTGCACCGA 
GACATGAAAG CTGCCAACGT GCTGATTACC AAGCATGGCA TCTTAAAGCT GGCTGACTTT 
GGCTTGGCCC GTGCTTTTAG CATTCCAAAG AACGAGAGTA AGAATCGCTA TACCAATCGC 
GTAGTAACCT TGTGGTACCG GCCGCCTGAG CTGCTACTTG GTGACCGCAA CTATGGTCCA 
CCCGTGGACA TGTGGGGAGC CGGCTGCATA ATGGCCGAGA TGTGGACACG CTCGCCCATC 
ATGCAAGGCA ATACGGAGCA GCAGCAGCTA ACCTTTATCT CGCAGCTATG CGGCTCCTTT 
ACGCCGGACG TGTGGCCGGG AGTGGAGGAG CTGGAGCTGT ACAAATCCAT CGAGCTGCCA 
AAGAACCAGA AGCGTCGAGT CAAGGAGCGC CTGCGTCCGT ATGTCAAGGA TCAAACCGGC 
TGTGATCTAT TGGACAAATT GCTGACCCTT GATCCCAAGA AACGCATCGA TGCGGACACA 
GCTCTGAATC ACGACTTCTT CTGGACGGAT CCCATGCCCA GCGACTTGAG CAAGATGCTG 
TCCCAGCACC TGCAGAGCAT GTTCGAGTAC CTGGCGCAGC CACGCCGCAG CAACCAGATG 
CGCAACTATC ACCAGCAACT GACCACCATG AACCAGAAGC CCCAGGACAA CAGTATGATT 
GACCGGGTTT GGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Cdk9 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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