Bap55 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Bap55
Entrez Gene ID	36956
Full Name	Brahma associated protein 55kD
Synonyms	Arp4,BAF53,BAP47,BAP55,Baf53,CG6546,Dmel\CG6546,bap55
General protein information	Preferred Names Brahma associated protein 55kD Names CG6546 gene product from transcript CG6546-RA BRM-associated protein 55 Bap55-PA CG6546-PA brahma associated protein 55 kD brahma associated protein 55kD brahma associated protein of 55kD
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 54B7-54B7

mRNA and Protein(s)

mRNA	Protein	Name
NM_137365.4	NP_611209.1	brahma associated protein 55kD

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Actl6a	NP_001034122.1
Oryza sativa (rice)	Os08g0137200	NP_001060954.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008687	XP_314784.2
Canis lupus familiaris (dog)	ACTL6A	XP_848224.1
Arabidopsis thaliana (thale cress)	ARP4	NP_564051.1
Danio rerio (zebrafish)	actl6a	NP_775347.1
Bos taurus (cattle)	ACTL6A	NP_001098505.1
Homo sapiens (human)	ACTL6A	NP_004292.1
Mus musculus (house mouse)	Actl6a	NP_062647.2
Gallus gallus (chicken)	ACTL6A	XP_422784.3
Pan troglodytes (chimpanzee)	ACTL6A	XP_003310168.1
Macaca mulatta (Rhesus monkey)	ACTL6A	NP_001098029.1
Drosophila melanogaster (fruit fly)	Bap55	NP_611209.1
Caenorhabditis elegans (roundworm)	swsn-6	NP_500801.2
Xenopus tropicalis (tropical clawed frog)	actl6a	NP_989337.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Bap55 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Bap55 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa13030	NM_137365.4 Latest version!	Drosophila melanogaster brahma associated protein 55kD (Bap55), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Bap55 ( NM_137365.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_611209.1 Drosophila melanogaster brahma associated protein 55kD (Bap55), mRNA.

Price & Availability↑

CloneID	OFa13030
Clone ID Related Accession (Same CDS sequence)	NM_137365.4
Accession Version	NM_137365.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1278bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	brahma associated protein 55kD
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_137365.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGTGGCG GCACCATGCT ATATGGCGGC GACGAGATCG GCGCCCTGGT CTTCGATCCT 
GGACATCATT CCTTGCGAGT GGGCTACGCA CAGGAGGATT CGCCCAAGGC GGAGATACCC 
TCGGTTGTGG GGATTGGAGC AGCTCCAGAG ACCAATCTCG ATCCGGAAAC TAAAACAGAC 
AACAATGCCA CGCCAAATAA TGCTGACCAG CGCAAGTTCT ATGTGGACAC CAACTACGTG 
ACCGTTCCCC GTTCCAATAT GGAGGTGCAG ACCTATATGA AAGACGGCAT GATTGACAAC 
TGGGACCTGT TTGAGAAGGT TATTGATTAT GCCTACGCCA ATGTCATTCA GTCGGAGCCG 
GAATACCATC CCGTGCTCTT TTCCGAGGCA TCGTGGAATG TCCGCAACAA CCGCGAGAAG 
CTAACCGAGC TTATGTTCGA GAAGTACAAT GTTCCAGCCT TCTTTCTGGT AAAGAACGCC 
GTTCTGGCTG CCTTCTCCAG CGGGCGGGCC ACCGCTTTGG TTGTCGATAG TGGAGCCACC 
CACACCTCGG CCGTTCCCGT CCATGAGGGC TATGTCCTAT CCCAGGCGGT GGTTAAGTCA 
CCCCTGGGTG GAGACTTCCT TTCACGACAG TGCCGCCAGC ATCTGGAGAA GCACGGCATT 
GATCTGTCGC CGGTATACAA GATTGCCTCC AAAGACGTTG TTAAGGAGCG CGACAACGGA 
CGCTTCACGC TGCGCAAACT GCCAGAGAAC CTAACTCAGT CGTGGCAAAA CTACATGTTG 
CAGCTCATGA TGCAAGACTT TCAGATGAAT GTGCTGCAGG TCCTAGAAAA TCCGTTCGAC 
GAACGGGTTG CTGCTCAAAT CCCGACGGTA CACTATGAGT TTCCTAATGG TTATCATCAG 
GACTTTGGCT CTGAGCGGTT CAAGATAGCC GAGAGTCTCT TTGACAATGC AATGCTGGGA 
GCTGGCCAAT TGGCGTCCAC CAGTGTGGGC ATGTGTGATG CGGATGTGCG GCTGTCACTT 
TTCGGCTCAG TTGTCGTTAC TGGTGGCAAT ACCCTTCTGC AAGGCTTTCC GGAGCGCCTA 
AATCGCGATC TCCAGCTGCG TGCCCCCTCA AATACGCGCC TAAAAATGAT TTCTGCCAAT 
GGCAGCGTGG AGCGAAGATT TGGAGCCTGG ATTGGCGGCT CTATTCTAGC CAGCATAGGT 
ACTTTCCAAC AGATGTGGAT ATCGTCGCAG GAGTACGAAG AGGCCGGCAA GAGCCAAGTC 
GAGCGGAAGT GTCCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_611209.1
CDS	124..1401
Translation	MSGGTMLYGGDEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAMLGAGQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSILASIGTFQQMWISSQEYEEAGKSQVERKCP

Target ORF information:

RefSeq Version	NM_137365.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster brahma associated protein 55kD (Bap55), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_137365.4

ORF Insert Sequence:

ATGAGTGGCG GCACCATGCT ATATGGCGGC GACGAGATCG GCGCCCTGGT CTTCGATCCT 
GGACATCATT CCTTGCGAGT GGGCTACGCA CAGGAGGATT CGCCCAAGGC GGAGATACCC 
TCGGTTGTGG GGATTGGAGC AGCTCCAGAG ACCAATCTCG ATCCGGAAAC TAAAACAGAC 
AACAATGCCA CGCCAAATAA TGCTGACCAG CGCAAGTTCT ATGTGGACAC CAACTACGTG 
ACCGTTCCCC GTTCCAATAT GGAGGTGCAG ACCTATATGA AAGACGGCAT GATTGACAAC 
TGGGACCTGT TTGAGAAGGT TATTGATTAT GCCTACGCCA ATGTCATTCA GTCGGAGCCG 
GAATACCATC CCGTGCTCTT TTCCGAGGCA TCGTGGAATG TCCGCAACAA CCGCGAGAAG 
CTAACCGAGC TTATGTTCGA GAAGTACAAT GTTCCAGCCT TCTTTCTGGT AAAGAACGCC 
GTTCTGGCTG CCTTCTCCAG CGGGCGGGCC ACCGCTTTGG TTGTCGATAG TGGAGCCACC 
CACACCTCGG CCGTTCCCGT CCATGAGGGC TATGTCCTAT CCCAGGCGGT GGTTAAGTCA 
CCCCTGGGTG GAGACTTCCT TTCACGACAG TGCCGCCAGC ATCTGGAGAA GCACGGCATT 
GATCTGTCGC CGGTATACAA GATTGCCTCC AAAGACGTTG TTAAGGAGCG CGACAACGGA 
CGCTTCACGC TGCGCAAACT GCCAGAGAAC CTAACTCAGT CGTGGCAAAA CTACATGTTG 
CAGCTCATGA TGCAAGACTT TCAGATGAAT GTGCTGCAGG TCCTAGAAAA TCCGTTCGAC 
GAACGGGTTG CTGCTCAAAT CCCGACGGTA CACTATGAGT TTCCTAATGG TTATCATCAG 
GACTTTGGCT CTGAGCGGTT CAAGATAGCC GAGAGTCTCT TTGACAATGC AATGCTGGGA 
GCTGGCCAAT TGGCGTCCAC CAGTGTGGGC ATGTGTGATG CGGATGTGCG GCTGTCACTT 
TTCGGCTCAG TTGTCGTTAC TGGTGGCAAT ACCCTTCTGC AAGGCTTTCC GGAGCGCCTA 
AATCGCGATC TCCAGCTGCG TGCCCCCTCA AATACGCGCC TAAAAATGAT TTCTGCCAAT 
GGCAGCGTGG AGCGAAGATT TGGAGCCTGG ATTGGCGGCT CTATTCTAGC CAGCATAGGT 
ACTTTCCAAC AGATGTGGAT ATCGTCGCAG GAGTACGAAG AGGCCGGCAA GAGCCAAGTC 
GAGCGGAAGT GTCCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Bap55 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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