| Gene Symbol | Or42b |
| Entrez Gene ID | 35516 |
| Full Name | Odorant receptor 42b |
| Synonyms | 41E.1,42b,CG12754,DOR118,Dmel\CG12754,OR42b |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Drosophila melanogaster(fruit fly) |
| Genome |
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Or42b cDNA ORF clone, Drosophila melanogaster(fruit fly)
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Gene
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Clones
gRNAs
The following Or42b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Or42b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID OFa12407 Clone ID Related Accession (Same CDS sequence) NM_078900.2 Accession Version NM_078900.2 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 1200bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1556035200000 Organism Drosophila melanogaster(fruit fly) Product odorant receptor 42b Comment Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 31, 2002 this sequence version replaced NM_078900.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends.
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141ATGGTCTTCG AGCTAATACG TCCCGCTCCG CTCACGGAGC AGAAGCGGTC CCGAGATGGT
TGCATCTACC TTTACCGCGC CATGAAGTTT ATTGGATGGC TGCCCCCCAA GCAGGGTGTG
CTCCGGTATG TGTACCTCAC CTGGACGCTA ATGACGTTCG TGTGGTGTAC AACGTACCTG
CCGCTTGGCT TCCTTGGTAG CTACATGACG CAGATCAAGT CCTTCTCCCC TGGAGAGTTT
CTCACTTCAC TCCAGGTGTG CATTAATGCC TACGGCTCAT CGGTAAAAGT TGCAATCACA
TACTCCATGC TCTGGCGCCT TATCAAGGCC AAGAACATTT TGGACCAGCT GGACCTGCGC
TGCACCGCCA TGGAGGAGCG CGAAAAGATC CACCTAGTGG TGGCCCGCAG CAACCATGCC
TTTCTCATCT TCACCTTTGT CTACTGCGGA TATGCCGGCT CCACCTACCT GAGCTCGGTT
CTCAGCGGGC GTCCGCCCTG GCAGCTGTAC AATCCCTTTA TTGATTGGCA TGACGGCACA
CTCAAGCTCT GGGTGGCCTC CACGTTGGAG TACATGGTGA TGTCAGGCGC CGTTCTGCAG
GATCAACTCT CGGACTCTTA CCCATTGATC TATACCCTCA TCCTTCGTGC TCACTTGGAC
ATGCTAAGGG AGCGCATCCG ACGCCTCCGT TCCGATGAGA ACCTGAGCGA GGCCGAGAGC
TATGAAGAGC TGGTCAAATG TGTGATGGAC CACAAGCTCA TTCTAAGATA CTGCGCGATT
ATTAAACCAG TAATCCAGGG GACCATCTTC ACACAGTTTC TGCTGATCGG CCTGGTTCTG
GGCTTCACGC TGATCAACGT GTTTTTCTTC TCAGACATCT GGACGGGCAT CGCATCATTT
ATGTTTGTTA TAACCATTTT GCTGCAGACC TTCCCCTTCT GCTACACATG CAACCTCATC
ATGGAGGACT GCGAGTCCTT GACCCATGCT ATTTTCCAGT CCAACTGGGT GGATGCCAGT
CGTCGCTACA AAACAACACT ACTGTATTTT CTCCAAAACG TGCAGCAGCC TATCGTTTTC
ATTGCAGGCG GTATCTTTCA GATATCCATG AGCAGCAACA TAAGTGTGGC AAAGTTTGCT
TTCTCCGTGA TAACCATTAC CAAGCAAATG AATATAGCTG ACAAATTTAA GACGGACTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_523624.2 CDS 1..1200 Translation 
Target ORF information:
RefSeq Version NM_078900.2 Organism Drosophila melanogaster(fruit fly) Definition Drosophila melanogaster odorant receptor 42b (Or42b), partial mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_078900.2
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141ATGGTCTTCG AGCTAATACG TCCCGCTCCG CTCACGGAGC AGAAGCGGTC CCGAGATGGT
TGCATCTACC TTTACCGCGC CATGAAGTTT ATTGGATGGC TGCCCCCCAA GCAGGGTGTG
CTCCGGTATG TGTACCTCAC CTGGACGCTA ATGACGTTCG TGTGGTGTAC AACGTACCTG
CCGCTTGGCT TCCTTGGTAG CTACATGACG CAGATCAAGT CCTTCTCCCC TGGAGAGTTT
CTCACTTCAC TCCAGGTGTG CATTAATGCC TACGGCTCAT CGGTAAAAGT TGCAATCACA
TACTCCATGC TCTGGCGCCT TATCAAGGCC AAGAACATTT TGGACCAGCT GGACCTGCGC
TGCACCGCCA TGGAGGAGCG CGAAAAGATC CACCTAGTGG TGGCCCGCAG CAACCATGCC
TTTCTCATCT TCACCTTTGT CTACTGCGGA TATGCCGGCT CCACCTACCT GAGCTCGGTT
CTCAGCGGGC GTCCGCCCTG GCAGCTGTAC AATCCCTTTA TTGATTGGCA TGACGGCACA
CTCAAGCTCT GGGTGGCCTC CACGTTGGAG TACATGGTGA TGTCAGGCGC CGTTCTGCAG
GATCAACTCT CGGACTCTTA CCCATTGATC TATACCCTCA TCCTTCGTGC TCACTTGGAC
ATGCTAAGGG AGCGCATCCG ACGCCTCCGT TCCGATGAGA ACCTGAGCGA GGCCGAGAGC
TATGAAGAGC TGGTCAAATG TGTGATGGAC CACAAGCTCA TTCTAAGATA CTGCGCGATT
ATTAAACCAG TAATCCAGGG GACCATCTTC ACACAGTTTC TGCTGATCGG CCTGGTTCTG
GGCTTCACGC TGATCAACGT GTTTTTCTTC TCAGACATCT GGACGGGCAT CGCATCATTT
ATGTTTGTTA TAACCATTTT GCTGCAGACC TTCCCCTTCT GCTACACATG CAACCTCATC
ATGGAGGACT GCGAGTCCTT GACCCATGCT ATTTTCCAGT CCAACTGGGT GGATGCCAGT
CGTCGCTACA AAACAACACT ACTGTATTTT CTCCAAAACG TGCAGCAGCC TATCGTTTTC
ATTGCAGGCG GTATCTTTCA GATATCCATG AGCAGCAACA TAAGTGTGGC AAAGTTTGCT
TTCTCCGTGA TAACCATTAC CAAGCAAATG AATATAGCTG ACAAATTTAA GACGGACTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH
Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D
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