Rpt4 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rpt4
Entrez Gene ID	31567
Full Name	Regulatory particle triple-A ATPase 4
Synonyms	CG3455,Dm_Rpt4a,Dm_Rpt4b,Dmel\CG3455,Dmp42D,S10b,l(1)G0114,l(1)G0227,l(1)G0345,p42D
General protein information	Preferred Names Regulatory particle triple-A ATPase 4 Names CG3455 gene product from transcript CG3455-RB CG3455-PB Rpt4-PB regulatory particle triple-A ATPase regulatory particle triple-A ATPase 4
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: X Map Location: 5E5-5E5

mRNA and Protein(s)

mRNA	Protein	Name
NM_132080.4	NP_572308.3	regulatory particle triple-A ATPase 4

Pathways from BioSystems

Homologies

Oryza sativa (rice)	Os06g0607800	NP_001058034.1
Magnaporthe oryzae (rice blast fungus)	MGG_00330	XP_003718756.1
Neurospora crassa	NCU07367	XP_958860.2
Homo sapiens (human)	PSMC6	NP_002797.3
Macaca mulatta (Rhesus monkey)	PSMC6	XP_001082028.2
Gallus gallus (chicken)	PSMC6	NP_001006494.1
Canis lupus familiaris (dog)	PSMC6	XP_535701.2
Oryza sativa (rice)	Os02g0199900	NP_001046218.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001407	XP_321726.5
Xenopus tropicalis (tropical clawed frog)	psmc6	NP_989342.1
Kluyveromyces lactis	KLLA0C09592g	XP_452625.1
Eremothecium gossypii	AGOS_AAL113W	NP_982429.1
Schizosaccharomyces pombe (fission yeast)	rpt4	NP_587809.2
Bos taurus (cattle)	PSMC6	NP_001039705.1
Danio rerio (zebrafish)	psmc6	NP_001003832.1
Arabidopsis thaliana (thale cress)	AT1G45000	NP_175120.1
Arabidopsis thaliana (thale cress)	RPT4A	NP_199115.1
Pan troglodytes (chimpanzee)	PSMC6	XP_001159476.1
Mus musculus (house mouse)	Psmc6	NP_080235.2
Rattus norvegicus (Norway rat)	Psmc6	NP_001093979.1
Drosophila melanogaster (fruit fly)	Rpt4	NP_572308.3
Caenorhabditis elegans (roundworm)	rpt-4	NP_001022113.1
Saccharomyces cerevisiae (baker's yeast)	RPT4	NP_014902.3

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rpt4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rpt4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa03125	NM_132080.4 Latest version!	Drosophila melanogaster regulatory particle triple-A ATPase 4 (Rpt4), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rpt4 ( NM_132080.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_572308.3 Drosophila melanogaster regulatory particle triple-A ATPase 4 (Rpt4), mRNA.

Price & Availability↑

CloneID	OFa03125
Clone ID Related Accession (Same CDS sequence)	NM_132080.4
Accession Version	NM_132080.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1194bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	regulatory particle triple-A ATPase 4
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_132080.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGACCGTGA CCGCCACACC GATGCCGGAC AATCTGCGGG TGAAAGCCTT ATCCGAGTAC 
CGAAAGAAGT TGCTAGAGCA CAAGGAAATC GAGGGACGCC TCAAAGAAAA GCGCGAGGAG 
ATCAAGGATC TGACCAAGCT GTACGACAAG TCGGAGAACG ATCTAAAGGC CCTGCAGAGC 
GTGGGACAGA TCGTTGGTGA GGTGCTGAAG CAGCTGACCG AGGATAAATT CATTGTGAAG 
GCCACCAATG GACCCCGCTA CGTGGTCGGC TGCCGCCGGC AGCTGGACAA AGCCAAGCTG 
AAGTCCGGAA CTCGTGTGGC CCTCGACATG ACCACACTGA CCATTATGCG CTACTTGCCG 
CGCGAGGTGG ACCCACTGGT GTACAATATG TCGCACGAGG ATCCCGGGGA TGTCACCTAC 
TCGGCCATCG GCGGCCTAAC CGACCAAATT CGCGAGCTGC GCGAAGTGAT CGAGCTGCCC 
CTACTGAATC CGGAGCTCTT CCTGCGCGTC GGCATCACGC CACCGAAGGG TTGTTTGCTG 
TACGGACCTC CTGGCACCGG CAAGACCCTG CTGGCCCGTG CAGTGGCCTC CCAGCTGGAC 
GCCAACTTCC TCAAGGTCGT GTCCTCGGCG ATTGTCGACA AGTATATTGG CGAGAGTGCG 
CGTCTCATTC GCGAGATGTT CAACTATGCC CGCGACCATC AGCCCTGCAT CATTTTCATG 
GACGAAATCG ACGCTATCGG TGGTCGGCGC TTCTCCGAGG GCACCTCTGC CGATCGCGAG 
ATCCAGCGCA CCCTGATGGA GCTGCTCAAC CAGATGGACG GCTTCGATTC GCTTGGCCAA 
GTCAAGATGA TCATGGCAAC CAATCGTCCG GACACCCTCG ATCCTGCCCT TCTGCGTCCG 
GGTCGCTTGG ACAGGAAGAT CGAGATTCCG CTGCCCAACG AGCAGGCTAG GTTGGAAATT 
CTCAAGATTC ACGCACTGAA GATCGCCAAG CACGGCGAAA TCGACTACGA GGCCATTGTC 
AAGCTGTCGG ACAACTTTAA TGGCGCTGAT CTGCGTAATG TCTGCACGGA GGCGGGTCTC 
TTTGCCATTC GTGCGGAGCG GGAGTACGTC ATCCAGGAGG ACTTCATGAA GGCGGTGCGC 
AAGGTGTCGG ACAACAAGAA GTTGGAGAGC AAGCTGGACT ACAAGCCCGT CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_572308.3
CDS	123..1316
Translation	MTVTATPMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQLTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLESKLDYKPV

Target ORF information:

RefSeq Version	NM_132080.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster regulatory particle triple-A ATPase 4 (Rpt4), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_132080.4

ORF Insert Sequence:

ATGACCGTGA CCGCCACACC GATGCCGGAC AATCTGCGGG TGAAAGCCTT ATCCGAGTAC 
CGAAAGAAGT TGCTAGAGCA CAAGGAAATC GAGGGACGCC TCAAAGAAAA GCGCGAGGAG 
ATCAAGGATC TGACCAAGCT GTACGACAAG TCGGAGAACG ATCTAAAGGC CCTGCAGAGC 
GTGGGACAGA TCGTTGGTGA GGTGCTGAAG CAGCTGACCG AGGATAAATT CATTGTGAAG 
GCCACCAATG GACCCCGCTA CGTGGTCGGC TGCCGCCGGC AGCTGGACAA AGCCAAGCTG 
AAGTCCGGAA CTCGTGTGGC CCTCGACATG ACCACACTGA CCATTATGCG CTACTTGCCG 
CGCGAGGTGG ACCCACTGGT GTACAATATG TCGCACGAGG ATCCCGGGGA TGTCACCTAC 
TCGGCCATCG GCGGCCTAAC CGACCAAATT CGCGAGCTGC GCGAAGTGAT CGAGCTGCCC 
CTACTGAATC CGGAGCTCTT CCTGCGCGTC GGCATCACGC CACCGAAGGG TTGTTTGCTG 
TACGGACCTC CTGGCACCGG CAAGACCCTG CTGGCCCGTG CAGTGGCCTC CCAGCTGGAC 
GCCAACTTCC TCAAGGTCGT GTCCTCGGCG ATTGTCGACA AGTATATTGG CGAGAGTGCG 
CGTCTCATTC GCGAGATGTT CAACTATGCC CGCGACCATC AGCCCTGCAT CATTTTCATG 
GACGAAATCG ACGCTATCGG TGGTCGGCGC TTCTCCGAGG GCACCTCTGC CGATCGCGAG 
ATCCAGCGCA CCCTGATGGA GCTGCTCAAC CAGATGGACG GCTTCGATTC GCTTGGCCAA 
GTCAAGATGA TCATGGCAAC CAATCGTCCG GACACCCTCG ATCCTGCCCT TCTGCGTCCG 
GGTCGCTTGG ACAGGAAGAT CGAGATTCCG CTGCCCAACG AGCAGGCTAG GTTGGAAATT 
CTCAAGATTC ACGCACTGAA GATCGCCAAG CACGGCGAAA TCGACTACGA GGCCATTGTC 
AAGCTGTCGG ACAACTTTAA TGGCGCTGAT CTGCGTAATG TCTGCACGGA GGCGGGTCTC 
TTTGCCATTC GTGCGGAGCG GGAGTACGTC ATCCAGGAGG ACTTCATGAA GGCGGTGCGC 
AAGGTGTCGG ACAACAAGAA GTTGGAGAGC AAGCTGGACT ACAAGCCCGT CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Rpt4 cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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