ORF » Species Summary » Drosophila erecta » LOC6540665 cDNA ORF clone

LOC6540665 cDNA ORF clone, Drosophila erecta

The following LOC6540665 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC6540665 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODi00076 XM_001968626.3
Latest version!		 Drosophila erecta vacuolar protein sorting-associated protein 53 homolog (LOC6540665), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
View Old Accession Versions >>
ODi00076 XM_001968626.2 Drosophila erecta uncharacterized protein (Dere\GG24384), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC6540665 ( XM_001968626.2 ) cDNA ORF clone, Drosophila erecta -> XP_001968662.1 Drosophila erecta uncharacterized protein (Dere\GG24384), mRNA.
    Price & Availability↑
    CloneID ODi00076
    Clone ID Related Accession (Same CDS sequence) XM_001968626.2 , XM_001968626.3
    Accession Version XM_001968626.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2664bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1450540800000
    Organism Drosophila erecta
    Product uncharacterized protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001956548). On Dec 21, 2015 this sequence version replaced XM_001968626.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 1.04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline URL :: http://flybase.org ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    ATGAGCGAGA CTGCGGTAGC TGCGGAGCCG GAAGAGAGGA TGGTTGCTAA CAACAAGATA 
    CACTTCTCCA AGGAGGTGAA GCAGGTCATC GACAAGGTTC TCAAAACGGA CGATCCCATG 
    GATGCGCCGG ACTTCAACAC TGTGGACTAC ATCAACCAGC TCTTCCCCAA CGAGCAATCG 
    CTGGCCGGGA TTGATGAGAC AATCCAAAAG ATGCAGTGCG AGGTGTCCCT GATTGACGAC 
    AACATCCGAT CCGTTGTTCG TGGACAGACG AACACCGGCC AGGATGGACA ACTTGCACTG 
    TGCGAGGCTC AAAAAGTTAT CAGCTCCCTG TTCAGCCACA TCATCGACGT GAAGACCCGG 
    GCGGAGCGCA CCGAAGAAAT GGTCAAAGAG ATAACCCGGG ATATCAAGCA GCTGGACTGC 
    GCCAAGCGCA ACCTAACTGC TGCCATCACC ACGCTGAATC ACCTGCACAT GCTGGTCGGC 
    GGAATCGAAA GTCTGAACAA ATTGATCGAG CGGCGATCCT ACGGAGAAAT CCTTAATCCC 
    CTCCAGGCTA TTACTGAAGT TAACCAGCAC TTCCAGCAGT TCTCCGACAT CGAAGAAATC 
    AAGAATCTCT CTCAGAGCGT AGATAAGATA CAGGTTACAC TGGCGCAGCA AATCACCGAG 
    GACTTCAAGG ATGCGTTTTC AGCAAAGCCA TCGGCACAGA ACCAACACCG TTTGGGACTT 
    AATCAGCTGG CCGATGCTTG TAAAGTGATG TCCGTGCTGG ATCCCAAAGT GAAGAAGGAG 
    CTGCTCAAGT GGTTTATTGC ACAACAGCTG GAGGAGTACA CGCACCTGTT TCACGAGAAC 
    CAGGATATAG CCTGGCTGGA CAAGATAGAT AAACGTTATG CCTGGCTTAA GAGGCATCTG 
    CTAGACTTCG AGGACAAGTA TGGACCCGTG TTTCCCCTAG ATTGGGAGGT TTCTGAGCGA 
    ATTACTGTGG AGTTTTGCCG GCAGACACGC GAACAGCTGG CACAAATCAT GGCCAAACGC 
    ACCAACGAAA TCGACGTGAG ACTTCTTTTG TTCGCCATCA ACAAGACGCA GGCATTTGAA 
    CAGCTGCTTT CCAAGCGCTT CACGGGAGTT ACACTGGGTG CGCAGCCCAC TGATAAAGCA 
    AGAGTGCTTA ATGAGCCAAC GACGACGGAC GGCCCTGTGG GCATCACCGT CTTCCACGAC 
    CAAATTGGTC AATGCTTCAA GTCACATTTG GACATATACA TACGCAGCAT CGACCGAAAC 
    CTTTCGGAGC TGATGGATAA GTTCGTAGAG ATGTCGCGGG AACCATACAA ATTCGCCGAG 
    GCCAAGACCA CCGTGTACCC CAGCTCCGGT GATCTTTTCG TCTTTTACAA GAAGTGTATG 
    GTGCAGTGCA ACCAGCTGAG CAACGAACAA CCTATGTACG ATCTGGCTTT AGTGTTCAAG 
    AAATATTTGC GGGAGTATGC CTCCAAAGTA CTCGAGGGCA GCACACCCAA GCTTGTGCCA 
    GCCACCACCA GCAGCTCCAT CGGTAAGAGT GTCTCGTTAC TCACGCGCGA CATGCAGAAT 
    CTATCCACTG CCGCTGGTCA GGTCTTTCAC AATTTCCTCA AGGAGGGCGA TACGCAGCGA 
    TTTGCAAGAG ATGATCTGGT GCGCATATGT TGCGTTTTGA CCACGGGTGA GTACTGTTTG 
    GAGACTGTCC AGCAGCTGGA GGATAAACTG AAGGAAAAGG TGACTTCTGC ATATGTCAGC 
    AAGATCGACA TGAGCGAGGA AAAGGATGTA TTTCATCGTA TCATTTCCAA CTGCATCCAA 
    CTTTTGGTTC AAGATCTAGA GGCTGGTTGC GAAGCTTCGC TGCAGGCGAT GTCCAAGGTG 
    CAGTGGCAAC AAATCAACAA TGTGGGGGAC CAGAGCGCCT TCATCAGCAG TCTTTGTGGA 
    AACTTTAAGC AGACAGTGCC GACCATCAGG GACACGTTAG CCAGTTCGCG GAAGTATTTT 
    ACTCAATTCT GCCATCGCTT CGTCGCCGCA TTCATACCGA AGTTCATCAA CGTGCTTTAT 
    CGCTGCAAAC TAACCCTCTC GGATGGTTCC AACAATGTTC TGGGCTGCGA GCAACTCTTG 
    TTGGACACCC ATTCGCTGAA GACGGCTTTA TTAGAGCTGC CTTCTGTGGG ATCGAGTGTA 
    AACCGCAAGG CGCCCACCAG TTACACCAAA GTTGTGGTCA AGGACATGAC TCGGGCCGAG 
    ATGATCATCA AGGTGGTGAT GACACCGGTC CAGCCGCCGG CGCACTTCAC CCAGCAAGTG 
    CTCAAGCTGC TGCCAGACAT TACCATTGCG GAGTATCAAA AGATTCTGGA TATGAAGGCG 
    GTCAAACGTG TGGATCAACT GCAACTGATT GATCTTTTTA AGCACACGGC TTCTGCAGCA 
    GCTGTTAGTG GCTTAATCGA GCCAAATGCT GGGGAGGAGG AACCCCAAGG TGCAGAAACA 
    GTAGCCGCAG CTTTGGCAAC CACTGACGAT GCTGAAACTG CGGCAGTACC AACTGAAACG 
    ACAACGGCAG CTTCCTCAAC GCCCAAACGA GCCTTCATCT TCAGCGTGGG CAGCTTTACG 
    GGAAGCGCAG ATAAAAATGC CGACGGAAGC TCCCAGACGG GCATCAGAAA GCTGGAAAAC 
    CTACTAAAAA AGCGCTTCCC CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_001968662.1
    CDS82..2745
    Translation

    Target ORF information:

    RefSeq Version XM_001968626.2
    Organism Drosophila erecta
    Definition Drosophila erecta uncharacterized protein (Dere\GG24384), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_001968626.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    ATGAGCGAGA CTGCGGTAGC TGCGGAGCCG GAAGAGAGGA TGGTTGCTAA CAACAAGATA 
    CACTTCTCCA AGGAGGTGAA GCAGGTCATC GACAAGGTTC TCAAAACGGA CGATCCCATG 
    GATGCGCCGG ACTTCAACAC TGTGGACTAC ATCAACCAGC TCTTCCCCAA CGAGCAATCG 
    CTGGCCGGGA TTGATGAGAC AATCCAAAAG ATGCAGTGCG AGGTGTCCCT GATTGACGAC 
    AACATCCGAT CCGTTGTTCG TGGACAGACG AACACCGGCC AGGATGGACA ACTTGCACTG 
    TGCGAGGCTC AAAAAGTTAT CAGCTCCCTG TTCAGCCACA TCATCGACGT GAAGACCCGG 
    GCGGAGCGCA CCGAAGAAAT GGTCAAAGAG ATAACCCGGG ATATCAAGCA GCTGGACTGC 
    GCCAAGCGCA ACCTAACTGC TGCCATCACC ACGCTGAATC ACCTGCACAT GCTGGTCGGC 
    GGAATCGAAA GTCTGAACAA ATTGATCGAG CGGCGATCCT ACGGAGAAAT CCTTAATCCC 
    CTCCAGGCTA TTACTGAAGT TAACCAGCAC TTCCAGCAGT TCTCCGACAT CGAAGAAATC 
    AAGAATCTCT CTCAGAGCGT AGATAAGATA CAGGTTACAC TGGCGCAGCA AATCACCGAG 
    GACTTCAAGG ATGCGTTTTC AGCAAAGCCA TCGGCACAGA ACCAACACCG TTTGGGACTT 
    AATCAGCTGG CCGATGCTTG TAAAGTGATG TCCGTGCTGG ATCCCAAAGT GAAGAAGGAG 
    CTGCTCAAGT GGTTTATTGC ACAACAGCTG GAGGAGTACA CGCACCTGTT TCACGAGAAC 
    CAGGATATAG CCTGGCTGGA CAAGATAGAT AAACGTTATG CCTGGCTTAA GAGGCATCTG 
    CTAGACTTCG AGGACAAGTA TGGACCCGTG TTTCCCCTAG ATTGGGAGGT TTCTGAGCGA 
    ATTACTGTGG AGTTTTGCCG GCAGACACGC GAACAGCTGG CACAAATCAT GGCCAAACGC 
    ACCAACGAAA TCGACGTGAG ACTTCTTTTG TTCGCCATCA ACAAGACGCA GGCATTTGAA 
    CAGCTGCTTT CCAAGCGCTT CACGGGAGTT ACACTGGGTG CGCAGCCCAC TGATAAAGCA 
    AGAGTGCTTA ATGAGCCAAC GACGACGGAC GGCCCTGTGG GCATCACCGT CTTCCACGAC 
    CAAATTGGTC AATGCTTCAA GTCACATTTG GACATATACA TACGCAGCAT CGACCGAAAC 
    CTTTCGGAGC TGATGGATAA GTTCGTAGAG ATGTCGCGGG AACCATACAA ATTCGCCGAG 
    GCCAAGACCA CCGTGTACCC CAGCTCCGGT GATCTTTTCG TCTTTTACAA GAAGTGTATG 
    GTGCAGTGCA ACCAGCTGAG CAACGAACAA CCTATGTACG ATCTGGCTTT AGTGTTCAAG 
    AAATATTTGC GGGAGTATGC CTCCAAAGTA CTCGAGGGCA GCACACCCAA GCTTGTGCCA 
    GCCACCACCA GCAGCTCCAT CGGTAAGAGT GTCTCGTTAC TCACGCGCGA CATGCAGAAT 
    CTATCCACTG CCGCTGGTCA GGTCTTTCAC AATTTCCTCA AGGAGGGCGA TACGCAGCGA 
    TTTGCAAGAG ATGATCTGGT GCGCATATGT TGCGTTTTGA CCACGGGTGA GTACTGTTTG 
    GAGACTGTCC AGCAGCTGGA GGATAAACTG AAGGAAAAGG TGACTTCTGC ATATGTCAGC 
    AAGATCGACA TGAGCGAGGA AAAGGATGTA TTTCATCGTA TCATTTCCAA CTGCATCCAA 
    CTTTTGGTTC AAGATCTAGA GGCTGGTTGC GAAGCTTCGC TGCAGGCGAT GTCCAAGGTG 
    CAGTGGCAAC AAATCAACAA TGTGGGGGAC CAGAGCGCCT TCATCAGCAG TCTTTGTGGA 
    AACTTTAAGC AGACAGTGCC GACCATCAGG GACACGTTAG CCAGTTCGCG GAAGTATTTT 
    ACTCAATTCT GCCATCGCTT CGTCGCCGCA TTCATACCGA AGTTCATCAA CGTGCTTTAT 
    CGCTGCAAAC TAACCCTCTC GGATGGTTCC AACAATGTTC TGGGCTGCGA GCAACTCTTG 
    TTGGACACCC ATTCGCTGAA GACGGCTTTA TTAGAGCTGC CTTCTGTGGG ATCGAGTGTA 
    AACCGCAAGG CGCCCACCAG TTACACCAAA GTTGTGGTCA AGGACATGAC TCGGGCCGAG 
    ATGATCATCA AGGTGGTGAT GACACCGGTC CAGCCGCCGG CGCACTTCAC CCAGCAAGTG 
    CTCAAGCTGC TGCCAGACAT TACCATTGCG GAGTATCAAA AGATTCTGGA TATGAAGGCG 
    GTCAAACGTG TGGATCAACT GCAACTGATT GATCTTTTTA AGCACACGGC TTCTGCAGCA 
    GCTGTTAGTG GCTTAATCGA GCCAAATGCT GGGGAGGAGG AACCCCAAGG TGCAGAAACA 
    GTAGCCGCAG CTTTGGCAAC CACTGACGAT GCTGAAACTG CGGCAGTACC AACTGAAACG 
    ACAACGGCAG CTTCCTCAAC GCCCAAACGA GCCTTCATCT TCAGCGTGGG CAGCTTTACG 
    GGAAGCGCAG ATAAAAATGC CGACGGAAGC TCCCAGACGG GCATCAGAAA GCTGGAAAAC 
    CTACTAAAAA AGCGCTTCCC CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC6540665 ( XM_001968626.3 ) cDNA ORF clone, Drosophila erecta -> XP_001968662.1 Drosophila erecta vacuolar protein sorting-associated protein 53 homolog (LOC6540665), mRNA.
    Price & Availability↑
    CloneID ODi00076
    Clone ID Related Accession (Same CDS sequence) XM_001968626.2 , XM_001968626.3
    Accession Version XM_001968626.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2664bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product vacuolar protein sorting-associated protein 53 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825200.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 6, 2018 this sequence version replaced XM_001968626.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    ATGAGCGAGA CTGCGGTAGC TGCGGAGCCG GAAGAGAGGA TGGTTGCTAA CAACAAGATA 
    CACTTCTCCA AGGAGGTGAA GCAGGTCATC GACAAGGTTC TCAAAACGGA CGATCCCATG 
    GATGCGCCGG ACTTCAACAC TGTGGACTAC ATCAACCAGC TCTTCCCCAA CGAGCAATCG 
    CTGGCCGGGA TTGATGAGAC AATCCAAAAG ATGCAGTGCG AGGTGTCCCT GATTGACGAC 
    AACATCCGAT CCGTTGTTCG TGGACAGACG AACACCGGCC AGGATGGACA ACTTGCACTG 
    TGCGAGGCTC AAAAAGTTAT CAGCTCCCTG TTCAGCCACA TCATCGACGT GAAGACCCGG 
    GCGGAGCGCA CCGAAGAAAT GGTCAAAGAG ATAACCCGGG ATATCAAGCA GCTGGACTGC 
    GCCAAGCGCA ACCTAACTGC TGCCATCACC ACGCTGAATC ACCTGCACAT GCTGGTCGGC 
    GGAATCGAAA GTCTGAACAA ATTGATCGAG CGGCGATCCT ACGGAGAAAT CCTTAATCCC 
    CTCCAGGCTA TTACTGAAGT TAACCAGCAC TTCCAGCAGT TCTCCGACAT CGAAGAAATC 
    AAGAATCTCT CTCAGAGCGT AGATAAGATA CAGGTTACAC TGGCGCAGCA AATCACCGAG 
    GACTTCAAGG ATGCGTTTTC AGCAAAGCCA TCGGCACAGA ACCAACACCG TTTGGGACTT 
    AATCAGCTGG CCGATGCTTG TAAAGTGATG TCCGTGCTGG ATCCCAAAGT GAAGAAGGAG 
    CTGCTCAAGT GGTTTATTGC ACAACAGCTG GAGGAGTACA CGCACCTGTT TCACGAGAAC 
    CAGGATATAG CCTGGCTGGA CAAGATAGAT AAACGTTATG CCTGGCTTAA GAGGCATCTG 
    CTAGACTTCG AGGACAAGTA TGGACCCGTG TTTCCCCTAG ATTGGGAGGT TTCTGAGCGA 
    ATTACTGTGG AGTTTTGCCG GCAGACACGC GAACAGCTGG CACAAATCAT GGCCAAACGC 
    ACCAACGAAA TCGACGTGAG ACTTCTTTTG TTCGCCATCA ACAAGACGCA GGCATTTGAA 
    CAGCTGCTTT CCAAGCGCTT CACGGGAGTT ACACTGGGTG CGCAGCCCAC TGATAAAGCA 
    AGAGTGCTTA ATGAGCCAAC GACGACGGAC GGCCCTGTGG GCATCACCGT CTTCCACGAC 
    CAAATTGGTC AATGCTTCAA GTCACATTTG GACATATACA TACGCAGCAT CGACCGAAAC 
    CTTTCGGAGC TGATGGATAA GTTCGTAGAG ATGTCGCGGG AACCATACAA ATTCGCCGAG 
    GCCAAGACCA CCGTGTACCC CAGCTCCGGT GATCTTTTCG TCTTTTACAA GAAGTGTATG 
    GTGCAGTGCA ACCAGCTGAG CAACGAACAA CCTATGTACG ATCTGGCTTT AGTGTTCAAG 
    AAATATTTGC GGGAGTATGC CTCCAAAGTA CTCGAGGGCA GCACACCCAA GCTTGTGCCA 
    GCCACCACCA GCAGCTCCAT CGGTAAGAGT GTCTCGTTAC TCACGCGCGA CATGCAGAAT 
    CTATCCACTG CCGCTGGTCA GGTCTTTCAC AATTTCCTCA AGGAGGGCGA TACGCAGCGA 
    TTTGCAAGAG ATGATCTGGT GCGCATATGT TGCGTTTTGA CCACGGGTGA GTACTGTTTG 
    GAGACTGTCC AGCAGCTGGA GGATAAACTG AAGGAAAAGG TGACTTCTGC ATATGTCAGC 
    AAGATCGACA TGAGCGAGGA AAAGGATGTA TTTCATCGTA TCATTTCCAA CTGCATCCAA 
    CTTTTGGTTC AAGATCTAGA GGCTGGTTGC GAAGCTTCGC TGCAGGCGAT GTCCAAGGTG 
    CAGTGGCAAC AAATCAACAA TGTGGGGGAC CAGAGCGCCT TCATCAGCAG TCTTTGTGGA 
    AACTTTAAGC AGACAGTGCC GACCATCAGG GACACGTTAG CCAGTTCGCG GAAGTATTTT 
    ACTCAATTCT GCCATCGCTT CGTCGCCGCA TTCATACCGA AGTTCATCAA CGTGCTTTAT 
    CGCTGCAAAC TAACCCTCTC GGATGGTTCC AACAATGTTC TGGGCTGCGA GCAACTCTTG 
    TTGGACACCC ATTCGCTGAA GACGGCTTTA TTAGAGCTGC CTTCTGTGGG ATCGAGTGTA 
    AACCGCAAGG CGCCCACCAG TTACACCAAA GTTGTGGTCA AGGACATGAC TCGGGCCGAG 
    ATGATCATCA AGGTGGTGAT GACACCGGTC CAGCCGCCGG CGCACTTCAC CCAGCAAGTG 
    CTCAAGCTGC TGCCAGACAT TACCATTGCG GAGTATCAAA AGATTCTGGA TATGAAGGCG 
    GTCAAACGTG TGGATCAACT GCAACTGATT GATCTTTTTA AGCACACGGC TTCTGCAGCA 
    GCTGTTAGTG GCTTAATCGA GCCAAATGCT GGGGAGGAGG AACCCCAAGG TGCAGAAACA 
    GTAGCCGCAG CTTTGGCAAC CACTGACGAT GCTGAAACTG CGGCAGTACC AACTGAAACG 
    ACAACGGCAG CTTCCTCAAC GCCCAAACGA GCCTTCATCT TCAGCGTGGG CAGCTTTACG 
    GGAAGCGCAG ATAAAAATGC CGACGGAAGC TCCCAGACGG GCATCAGAAA GCTGGAAAAC 
    CTACTAAAAA AGCGCTTCCC CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_001968662.1
    CDS105..2768
    Translation

    Target ORF information:

    RefSeq Version XM_001968626.3
    Organism Drosophila erecta
    Definition Drosophila erecta vacuolar protein sorting-associated protein 53 homolog (LOC6540665), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_001968626.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    ATGAGCGAGA CTGCGGTAGC TGCGGAGCCG GAAGAGAGGA TGGTTGCTAA CAACAAGATA 
    CACTTCTCCA AGGAGGTGAA GCAGGTCATC GACAAGGTTC TCAAAACGGA CGATCCCATG 
    GATGCGCCGG ACTTCAACAC TGTGGACTAC ATCAACCAGC TCTTCCCCAA CGAGCAATCG 
    CTGGCCGGGA TTGATGAGAC AATCCAAAAG ATGCAGTGCG AGGTGTCCCT GATTGACGAC 
    AACATCCGAT CCGTTGTTCG TGGACAGACG AACACCGGCC AGGATGGACA ACTTGCACTG 
    TGCGAGGCTC AAAAAGTTAT CAGCTCCCTG TTCAGCCACA TCATCGACGT GAAGACCCGG 
    GCGGAGCGCA CCGAAGAAAT GGTCAAAGAG ATAACCCGGG ATATCAAGCA GCTGGACTGC 
    GCCAAGCGCA ACCTAACTGC TGCCATCACC ACGCTGAATC ACCTGCACAT GCTGGTCGGC 
    GGAATCGAAA GTCTGAACAA ATTGATCGAG CGGCGATCCT ACGGAGAAAT CCTTAATCCC 
    CTCCAGGCTA TTACTGAAGT TAACCAGCAC TTCCAGCAGT TCTCCGACAT CGAAGAAATC 
    AAGAATCTCT CTCAGAGCGT AGATAAGATA CAGGTTACAC TGGCGCAGCA AATCACCGAG 
    GACTTCAAGG ATGCGTTTTC AGCAAAGCCA TCGGCACAGA ACCAACACCG TTTGGGACTT 
    AATCAGCTGG CCGATGCTTG TAAAGTGATG TCCGTGCTGG ATCCCAAAGT GAAGAAGGAG 
    CTGCTCAAGT GGTTTATTGC ACAACAGCTG GAGGAGTACA CGCACCTGTT TCACGAGAAC 
    CAGGATATAG CCTGGCTGGA CAAGATAGAT AAACGTTATG CCTGGCTTAA GAGGCATCTG 
    CTAGACTTCG AGGACAAGTA TGGACCCGTG TTTCCCCTAG ATTGGGAGGT TTCTGAGCGA 
    ATTACTGTGG AGTTTTGCCG GCAGACACGC GAACAGCTGG CACAAATCAT GGCCAAACGC 
    ACCAACGAAA TCGACGTGAG ACTTCTTTTG TTCGCCATCA ACAAGACGCA GGCATTTGAA 
    CAGCTGCTTT CCAAGCGCTT CACGGGAGTT ACACTGGGTG CGCAGCCCAC TGATAAAGCA 
    AGAGTGCTTA ATGAGCCAAC GACGACGGAC GGCCCTGTGG GCATCACCGT CTTCCACGAC 
    CAAATTGGTC AATGCTTCAA GTCACATTTG GACATATACA TACGCAGCAT CGACCGAAAC 
    CTTTCGGAGC TGATGGATAA GTTCGTAGAG ATGTCGCGGG AACCATACAA ATTCGCCGAG 
    GCCAAGACCA CCGTGTACCC CAGCTCCGGT GATCTTTTCG TCTTTTACAA GAAGTGTATG 
    GTGCAGTGCA ACCAGCTGAG CAACGAACAA CCTATGTACG ATCTGGCTTT AGTGTTCAAG 
    AAATATTTGC GGGAGTATGC CTCCAAAGTA CTCGAGGGCA GCACACCCAA GCTTGTGCCA 
    GCCACCACCA GCAGCTCCAT CGGTAAGAGT GTCTCGTTAC TCACGCGCGA CATGCAGAAT 
    CTATCCACTG CCGCTGGTCA GGTCTTTCAC AATTTCCTCA AGGAGGGCGA TACGCAGCGA 
    TTTGCAAGAG ATGATCTGGT GCGCATATGT TGCGTTTTGA CCACGGGTGA GTACTGTTTG 
    GAGACTGTCC AGCAGCTGGA GGATAAACTG AAGGAAAAGG TGACTTCTGC ATATGTCAGC 
    AAGATCGACA TGAGCGAGGA AAAGGATGTA TTTCATCGTA TCATTTCCAA CTGCATCCAA 
    CTTTTGGTTC AAGATCTAGA GGCTGGTTGC GAAGCTTCGC TGCAGGCGAT GTCCAAGGTG 
    CAGTGGCAAC AAATCAACAA TGTGGGGGAC CAGAGCGCCT TCATCAGCAG TCTTTGTGGA 
    AACTTTAAGC AGACAGTGCC GACCATCAGG GACACGTTAG CCAGTTCGCG GAAGTATTTT 
    ACTCAATTCT GCCATCGCTT CGTCGCCGCA TTCATACCGA AGTTCATCAA CGTGCTTTAT 
    CGCTGCAAAC TAACCCTCTC GGATGGTTCC AACAATGTTC TGGGCTGCGA GCAACTCTTG 
    TTGGACACCC ATTCGCTGAA GACGGCTTTA TTAGAGCTGC CTTCTGTGGG ATCGAGTGTA 
    AACCGCAAGG CGCCCACCAG TTACACCAAA GTTGTGGTCA AGGACATGAC TCGGGCCGAG 
    ATGATCATCA AGGTGGTGAT GACACCGGTC CAGCCGCCGG CGCACTTCAC CCAGCAAGTG 
    CTCAAGCTGC TGCCAGACAT TACCATTGCG GAGTATCAAA AGATTCTGGA TATGAAGGCG 
    GTCAAACGTG TGGATCAACT GCAACTGATT GATCTTTTTA AGCACACGGC TTCTGCAGCA 
    GCTGTTAGTG GCTTAATCGA GCCAAATGCT GGGGAGGAGG AACCCCAAGG TGCAGAAACA 
    GTAGCCGCAG CTTTGGCAAC CACTGACGAT GCTGAAACTG CGGCAGTACC AACTGAAACG 
    ACAACGGCAG CTTCCTCAAC GCCCAAACGA GCCTTCATCT TCAGCGTGGG CAGCTTTACG 
    GGAAGCGCAG ATAAAAATGC CGACGGAAGC TCCCAGACGG GCATCAGAAA GCTGGAAAAC 
    CTACTAAAAA AGCGCTTCCC CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Assembly reconciliation.
    Bioinformatics (Oxford, England)24(1)42-5(2008 Jan)
    Zimin AV,Smith DR,Sutton G,Yorke JA


    Evolution of genes and genomes on the Drosophila phylogeny.
    Nature450(7167)203-18(2007 Nov)
    ,Clark AG,Eisen MB,Smith DR,Bergman CM,Oliver B,Markow TA,Kaufman TC,Kellis M,Gelbart W,Iyer VN,Pollard DA,Sackton TB,Larracuente AM,Singh ND,Abad JP,Abt DN,Adryan B,Aguade M,Akashi H,Anderson WW,Aquadro CF,Ardell DH,Arguello R,Artieri CG,Barbash DA,Barker D,Barsanti P,Batterham P,Batzoglou S,Begun D,Bhutkar A,Blanco E,Bosak SA,Bradley RK,Brand AD,Brent MR,Brooks AN,Brown RH,Butlin RK,Caggese C,Calvi BR,Bernardo de Carvalho A,Caspi A,Castrezana S,Celniker SE,Chang JL,Chapple C,Chatterji S,Chinwalla A,Civetta A,Clifton SW,Comeron JM,Costello JC,Coyne JA,Daub J,David RG,Delcher AL,Delehaunty K,Do CB,Ebling H,Edwards K,Eickbush T,Evans JD,Filipski A,Findeiss S,Freyhult E,Fulton L,Fulton R,Garcia AC,Gardiner A,Garfield DA,Garvin BE,Gibson G,Gilbert D,Gnerre S,Godfrey J,Good R,Gotea V,Gravely B,Greenberg AJ,Griffiths-Jones S,Gross S,Guigo R,Gustafson EA,Haerty W,Hahn MW,Halligan DL,Halpern AL,Halter GM,Han MV,Heger A,Hillier L,Hinrichs AS,Holmes I,Hoskins RA,Hubisz MJ,Hultmark D,Huntley MA,Jaffe DB,Jagadeeshan S,Jeck WR,Johnson J,Jones CD,Jordan WC,Karpen GH,Kataoka E,Keightley PD,Kheradpour P,Kirkness EF,Koerich LB,Kristiansen K,Kudrna D,Kulathinal RJ,Kumar S,Kwok R,Lander E,Langley CH,Lapoint R,Lazzaro BP,Lee SJ,Levesque L,Li R,Lin CF,Lin MF,Lindblad-Toh K,Llopart A,Long M,Low L,Lozovsky E,Lu J,Luo M,Machado CA,Makalowski W,Marzo M,Matsuda M,Matzkin L,McAllister B,McBride CS,McKernan B,McKernan K,Mendez-Lago M,Minx P,Mollenhauer MU,Montooth K,Mount SM,Mu X,Myers E,Negre B,Newfeld S,Nielsen R,Noor MA,O'Grady P,Pachter L,Papaceit M,Parisi MJ,Parisi M,Parts L,Pedersen JS,Pesole G,Phillippy AM,Ponting CP,Pop M,Porcelli D,Powell JR,Prohaska S,Pruitt K,Puig M,Quesneville H,Ram KR,Rand D,Rasmussen MD,Reed LK,Reenan R,Reily A,Remington KA,Rieger TT,Ritchie MG,Robin C,Rogers YH,Rohde C,Rozas J,Rubenfield MJ,Ruiz A,Russo S,Salzberg SL,Sanchez-Gracia A,Saranga DJ,Sato H,Schaeffer SW,Schatz MC,Schlenke T,Schwartz R,Segarra C,Singh RS,Sirot L,Sirota M,Sisneros NB,Smith CD,Smith TF,Spieth J,Stage DE,Stark A,Stephan W,Strausberg RL,Strempel S,Sturgill D,Sutton G,Sutton GG,Tao W,Teichmann S,Tobari YN,Tomimura Y,Tsolas JM,Valente VL,Venter E,Venter JC,Vicario S,Vieira FG,Vilella AJ,Villasante A,Walenz B,Wang J,Wasserman M,Watts T,Wilson D,Wilson RK,Wing RA,Wolfner MF,Wong A,Wong GK,Wu CI,Wu G,Yamamoto D,Yang HP,Yang SP,Yorke JA,Yoshida K,Zdobnov E,Zhang P,Zhang Y,Zimin AV,Baldwin J,Abdouelleil A,Abdulkadir J,Abebe A,Abera B,Abreu J,Acer SC,Aftuck L,Alexander A,An P,Anderson E,Anderson S,Arachi H,Azer M,Bachantsang P,Barry A,Bayul T,Berlin A,Bessette D,Bloom T,Blye J,Boguslavskiy L,Bonnet C,Boukhgalter B,Bourzgui I,Brown A,Cahill P,Channer S,Cheshatsang Y,Chuda L,Citroen M,Collymore A,Cooke P,Costello M,D'Aco K,Daza R,De Haan G,DeGray S,DeMaso C,Dhargay N,Dooley K,Dooley E,Doricent M,Dorje P,Dorjee K,Dupes A,Elong R,Falk J,Farina A,Faro S,Ferguson D,Fisher S,Foley CD,Franke A,Friedrich D,Gadbois L,Gearin G,Gearin CR,Giannoukos G,Goode T,Graham J,Grandbois E,Grewal S,Gyaltsen K,Hafez N,Hagos B,Hall J,Henson C,Hollinger A,Honan T,Huard MD,Hughes L,Hurhula B,Husby ME,Kamat A,Kanga B,Kashin S,Khazanovich D,Kisner P,Lance K,Lara M,Lee W,Lennon N,Letendre F,LeVine R,Lipovsky A,Liu X,Liu J,Liu S,Lokyitsang T,Lokyitsang Y,Lubonja R,Lui A,MacDonald P,Magnisalis V,Maru K,Matthews C,McCusker W,McDonough S,Mehta T,Meldrim J,Meneus L,Mihai O,Mihalev A,Mihova T,Mittelman R,Mlenga V,Montmayeur A,Mulrain L,Navidi A,Naylor J,Negash T,Nguyen T,Nguyen N,Nicol R,Norbu C,Norbu N,Novod N,O'Neill B,Osman S,Markiewicz E,Oyono OL,Patti C,Phunkhang P,Pierre F,Priest M,Raghuraman S,Rege F,Reyes R,Rise C,Rogov P,Ross K,Ryan E,Settipalli S,Shea T,Sherpa N,Shi L,Shih D,Sparrow T,Spaulding J,Stalker J,Stange-Thomann N,Stavropoulos S,Stone C,Strader C,Tesfaye S,Thomson T,Thoulutsang Y,Thoulutsang D,Topham K,Topping I,Tsamla T,Vassiliev H,Vo A,Wangchuk T,Wangdi T,Weiand M,Wilkinson J,Wilson A,Yadav S,Young G,Yu Q,Zembek L,Zhong D,Zimmer A,Zwirko Z,Jaffe DB,Alvarez P,Brockman W,Butler J,Chin C,Gnerre S,Grabherr M,Kleber M,Mauceli E,MacCallum I


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