pcdh1gb9 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	pcdh1gb9
Entrez Gene ID	553940
Full Name	protocadherin 1 gamma b 9
Synonyms	DrPcdh1g10,pcdh1g12,pcdh1gb9-A
General protein information	Preferred Names protocadherin 1 gamma b 9 Names protocadherin 1 gamma b 9 pcdh1gb9-sCP1 pcdh1gb9-sCP1-2 pcdh1gb9-sCP2 protocadherin cluster 1 gamma 12
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001020778.2	NP_001018614.2	protocadherin 1 gamma b 9 precursor
NM_001020778.3	NP_001018614.3	protocadherin 1 gamma b 9 precursor

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	LOC487168	XP_544296.2
Bos taurus (cattle)	LOC786512	XP_005209563.1
Rattus norvegicus (Norway rat)	Pcdhb3	NP_001014783.1
Danio rerio (zebrafish)	pcdh1g1	NP_001018640.1
Danio rerio (zebrafish)	pcdh1g9	NP_001019280.1
Danio rerio (zebrafish)	pcdh2g28	NP_001019371.1
Danio rerio (zebrafish)	pcdh2g13	NP_001019356.1
Danio rerio (zebrafish)	pcdh2g12	NP_001019344.1
Danio rerio (zebrafish)	pcdh2g3	NP_001019347.1
Danio rerio (zebrafish)	pcdh1g29	NP_001019296.1
Danio rerio (zebrafish)	zgc:162322	NP_001103206.1
Danio rerio (zebrafish)	LOC101882004	XP_005155399.1
Danio rerio (zebrafish)	LOC101882147	XP_005155402.1
Danio rerio (zebrafish)	LOC101882199	XP_005155403.1
Danio rerio (zebrafish)	LOC101882753	XP_005155410.1
Danio rerio (zebrafish)	LOC101882815	XP_005155411.1
Danio rerio (zebrafish)	LOC101886827	XP_005155393.1
Danio rerio (zebrafish)	LOC101887061	XP_005155397.1
Danio rerio (zebrafish)	LOC101886218	XP_005155386.1
Homo sapiens (human)	PCDHB3	NP_061760.1
Mus musculus (house mouse)	Pcdhb3	NP_444358.2
Danio rerio (zebrafish)	pcdh2g6	NP_001019350.1
Danio rerio (zebrafish)	pcdh1gb2	NP_001012676.2
Danio rerio (zebrafish)	pcdh1g31	NP_001019298.1
Danio rerio (zebrafish)	pcdh1g23	XP_005155394.1
Danio rerio (zebrafish)	LOC101882581	XP_005155407.1
Danio rerio (zebrafish)	LOC101882056	XP_005155401.1
Danio rerio (zebrafish)	LOC101886953	XP_005155395.1
Danio rerio (zebrafish)	LOC101883385	XP_005157165.1
Danio rerio (zebrafish)	pcdh2g29	NP_001019372.1
Danio rerio (zebrafish)	pcdh2g1	NP_001019345.1
Danio rerio (zebrafish)	pcdh2g10	NP_001019354.1
Danio rerio (zebrafish)	pcdh2g8	NP_001019352.1
Danio rerio (zebrafish)	pcdh2g9	NP_001019353.1
Danio rerio (zebrafish)	pcdh1g26	NP_001019295.1
Danio rerio (zebrafish)	pcdh1gc6	NP_001012675.2
Gallus gallus (chicken)	LOC100857544	XP_004944792.1
Danio rerio (zebrafish)	LOC101882701	XP_005155409.1
Danio rerio (zebrafish)	LOC101887136	XP_005155398.1
Danio rerio (zebrafish)	LOC100334651	XP_002664328.1
Danio rerio (zebrafish)	LOC100536800	XP_005157166.1
Danio rerio (zebrafish)	LOC100537028	XP_003199873.2
Danio rerio (zebrafish)	LOC100537354	XP_005157167.1
Pan troglodytes (chimpanzee)	PCDHB3	NP_001013026.1
Danio rerio (zebrafish)	pcdh1gc5	NP_001012674.2
Danio rerio (zebrafish)	pcdh1g11	NP_001019282.1
Danio rerio (zebrafish)	pcdh2g17	NP_001019360.1
Danio rerio (zebrafish)	pcdh2g16	NP_001019359.1
Danio rerio (zebrafish)	pcdh2g5	NP_001019349.1
Danio rerio (zebrafish)	pcdh2g4	NP_001019348.1
Danio rerio (zebrafish)	pcdh1g22	NP_997823.1
Danio rerio (zebrafish)	pcdh1g32	NP_001019299.1
Danio rerio (zebrafish)	LOC101882646	XP_005155408.1
Danio rerio (zebrafish)	LOC101882513	XP_005155406.1
Danio rerio (zebrafish)	LOC101886172	XP_005155385.1
Danio rerio (zebrafish)	LOC101886586	XP_005155390.1
Danio rerio (zebrafish)	LOC101886640	XP_005155391.1
Danio rerio (zebrafish)	LOC100329523	XP_002664337.3
Danio rerio (zebrafish)	LOC100537127	XP_003199875.2
Danio rerio (zebrafish)	LOC100535342	XP_003199375.1
Macaca mulatta (Rhesus monkey)	PCDHB3	XP_001090814.1
Danio rerio (zebrafish)	pcdh1g18	NP_001019288.1
Danio rerio (zebrafish)	pcdh1g2	NP_001018872.1
Danio rerio (zebrafish)	pcdh1g3	NP_001018871.1
Danio rerio (zebrafish)	pcdh1gb9	NP_001018614.2
Danio rerio (zebrafish)	pcdh2g2	NP_001019346.1
Danio rerio (zebrafish)	pcdh2g7	NP_001019351.1
Danio rerio (zebrafish)	pcdh1g30	NP_001019297.1
Danio rerio (zebrafish)	LOC101886532	XP_005155389.1
Danio rerio (zebrafish)	LOC101886713	XP_005155392.1
Danio rerio (zebrafish)	LOC100536351	XP_003199865.2

Gene Ontology
Bibliography

Related articles in PubMed

Comparative genomics and diversifying selection of the clustered vertebrate protocadherin genes.
Wu Q
Genetics169(4)2179-88(2005 Apr)

Genomic organization and transcripts of the zebrafish Protocadherin genes.
Tada MN, Senzaki K, Tai Y, Morishita H, Tanaka YZ, Murata Y, Ishii Y, Asakawa S, Shimizu N, Sugino H, Yagi T
Gene340(2)197-211(2004 Oct)

Gene conversion and the evolution of protocadherin gene cluster diversity.
Noonan JP, Grimwood J, Schmutz J, Dickson M, Myers RM
Genome research14(3)354-66(2004 Mar)

Multiple variable first exons: a mechanism for cell- and tissue-specific gene regulation.
Zhang T, Haws P, Wu Q
Genome research14(1)79-89(2004 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following pcdh1gb9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pcdh1gb9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa04609	NM_001020778.2 Latest version!	Danio rerio protocadherin 1 gamma b 9 (pcdh1gb9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00
ODa159727	NM_001020778.3 Latest version!	Danio rerio protocadherin 1 gamma b 9 (pcdh1gb9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

pcdh1gb9 ( NM_001020778.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001018614.2 Danio rerio protocadherin 1 gamma b 9 (pcdh1gb9), mRNA.

Price & Availability↑

CloneID	ODa04609
Clone ID Related Accession (Same CDS sequence)	NM_001020778.2
Accession Version	NM_001020778.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2814bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1366128000000
Organism	Danio rerio(zebrafish)
Product	protocadherin 1 gamma b 9 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB160969.1. On or before Feb 23, 2008 this sequence version replaced XM_001343439.1, NM_001020778.1. ##Evidence-Data-START## Transcript exon combination :: AB160969.1 [ECO:0000332] ##Evidence-Data-END##

ATGAAGACAA TGCTTGATGC AATGATACAG CACTCGGTGC TGATTTTGAC TCTTCTGGTT 
TACATAGCGC GAGGACAGGT CAGTTACTCC ATTCCAGAAG AAATGGCAAA AGGATCGATG 
GTTGGAAACA TCGCGCAGGA TTTGGGTTTG GATTTACAAC GACTGAAGTC TGGAAAAGCA 
CGAATTTTTT CAAGAGACAG CACAGAATAC ATCGAACTGA ACAGAAACAC GGGATTGCTG 
CTCATCAAAG AGAAAATGGA TCGCGAGTCT CTTTGTGCAA AAACAACACC GTGTGCTTTA 
CACCTTCAAA TGATTTTGGA TAACCCGATG GAATTATACA CAATAACGGT GGAAATCACT 
GATATAAATG ATAACGCTCC AAATTTCCAG AAAAGAGACT TTAAATTTGA GATCAGCGAA 
TCGGCGATGG TAGGAGCTCG TTTTATGCTC GGGAAAGCTT TTGATCCGGA TGTAGGAACA 
AATTCACTTC AAAGCTACTC GCTCAAACCG ACAGATAAAT TCCGGCTTGA ATTGCAAAGT 
CAAGCAGATG GTAGTAAAAA CGTCGAGATG ATTTTACAAA AAGCACTTGA CAGAGAAATG 
CAAAGCTCGT TTACTCTGCT GTTAGAAGCG TTTGATGGAG GCGACCCAGT GCTCTCTGGT 
ACTGTACAGA TACATATTGC TGTATTAGAT ATTAATGATA ACGCGCCTGT ATTTATGCAG 
AAGGAATATA AAGCAACAGC AACAGAAGAG GCACCAAAAG GTAGCATATT AACAGTCGTG 
AGCGCAACTG ATACAGATGA AGGATCCAAC AGTGAAGTAA CGTACTACAT ATCGGACACA 
ATGGACAGTG TTATGGCCGA TATGTTTCTT GTTAATGAAC AAACTGGAGA ACTGATATTA 
AATGGTCACT TTGACTATGA AAAAGTGAGC CACTATGAAC TTACGATTCA TGCAAAAGAT 
CAAGGAGGTC TCTCTAACGC ATGCAAAGTA ATTATTGATG TGCTGGATGT CAATGATAAT 
TCACCAAGTA TCAATATTCT GTCTAGTTCC CATTCAGTAT CCGAAGGATC CAAATTTGGT 
ACTGTAATAG CAATGCTAAA TGTTGATGAT CTTGATTCAG GTGCAAGTGG TCAGGTTCAG 
TGTGTGATGA GTGAGGAAAT CCCTTTTGTT ATTAAGTCTC AATCTAGCAA TTTCTTCAGC 
TTGCAAACAG AGCAGGAGCT GGACAGAGAA CGAGAAACTG AGTATAATAT CAGTGTGATA 
TGTAGTGATG AGGGAGTGCC TTCGCTCTCC AGTAGCGTCT CTCTTACTGT GCAGATATCA 
GATGTGAATG ATAATCCTCC TGTCTTTAAG AAGAGTAACT ATGAGGCCTT TGTGATGGAG 
AATAACACAC CTGGTCTCTC TATATTCACA GTAAAAGCCA GTGATGCTGA CTGGAATCAG 
AATGCTCGTG TTTCTTATAT TCTAGAAGAC AGCACTGTTA GTGGAGTCTC GGTCTCATCA 
TATGTGTCAG TGCACCCTGA CAGCGGACTG ATTACAGCTG TGCGCTCTTT TGACTATGAG 
ACACTGAAAG ATTTCCACTT CCGCGTAAAA GCGCAGGACG GAGGCTCTCC TCCGCTCAGT 
AGTAACGTCA CAGTGAAAGT TACTGTTCAA GACCAGAATG ACAACGCTCC TCAGGTTCTG 
TATCCAGTAC AGACTGGCAC TTCGGTGGTG GCTGAAATTG TGCCTCGTGC TGCAGATGTT 
GGATATCTGG TCACTAAAGT GGTGGCTGTT GATGTGGACT CTGGTCAGAA TGCCTGGCTC 
TCCTATAAAC TCCAGAAAGC TCCAGACAGA GCGCTGTTTG AAGTGGGCTT ACAGAATGGA 
GAAATACGAA CTGTGCGACA AGTCACTGAT AAAGATGCTG TCAAACAAAA ACTCACTGTT 
GTTGTGGAGG ATAACGGACA GCCCTCTCGC TCAGCTGTGG TCTCCATTAA CGTGGCTGTG 
GCTGACAGCT TTCCTGAAGT GCTGTCAGAG TTCACAGACT TTACGCATGA GAAACAATAT 
AACGACAGCT TAACTTTTTA TTTAGTTCTC GCACTGGCCG CTGTTTCTTT CCTATTCATC 
ACTTGTGTGG TTGTGATAAT ATCCGTTAAA ATCTACAGAT GGAGACAATC TCGCTTCCTC 
TATCAGTCCA ATCTGCCTGT TATTCCGTAC TATCCACCGC ATTACGCAGA CACAGGAGTC 
ACTGGAACTC TGCCGCACGG CTATAACTAT GAAGTGTGCA TGACGACTGA CTCGAGGAAG 
AGTGACTGTA AGTTTTCTAC TCTTGGCGGA CAGAATGTTT TAGTGGTGGA TCCGAGTTTC 
GCAGAAACTA TGAAGCACAC AATAAAGAAA AATAGTTCCA TTGACGATCT GCAGTCTACG 
GAATCGCAAA AGCCACCTAA TACTGACTGG CGATTTCCCC CAAACCAGAG GCCTGGACCC 
AGCGGGGCTG GAGCACGTCC TGAAGAGGCA GGTGCCGGTG CTGGTGTGAT AGCAGGAACA 
GGACCATGGC CCAACCCCCC TACTGAGGCT GAACAGCTCC AGGCTATGAT GGCAGCAGCA 
AACGCAAGTG AAGCCACTGC GACTCTTGGC CCTCGCTACA ATCTACAGTA TGGCCCGGAT 
TACCGTCAGA ACGTCTACAT CCCAGGCAGC ACTGCCACCC TTACAGCCAA CCCTCAGCAA 
CAGGTTCTCC AGCAGGCCCT TCCTCCACCA CAGGCCCTTC CACCTACCGA AGTCCCCAAA 
GCGGCTCAAA CACCAGCCAG TAAGAAGAAA CCCACAAAGA AAGACAAGAA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001018614.2
CDS	1..2814
Translation	MKTMLDAMIQHSVLILTLLVYIARGQVSYSIPEEMAKGSMVGNIAQDLGLDLQRLKSGKARIFSRDSTEYIELNRNTGLLLIKEKMDRESLCAKTTPCALHLQMILDNPMELYTITVEITDINDNAPNFQKRDFKFEISESAMVGARFMLGKAFDPDVGTNSLQSYSLKPTDKFRLELQSQADGSKNVEMILQKALDREMQSSFTLLLEAFDGGDPVLSGTVQIHIAVLDINDNAPVFMQKEYKATATEEAPKGSILTVVSATDTDEGSNSEVTYYISDTMDSVMADMFLVNEQTGELILNGHFDYEKVSHYELTIHAKDQGGLSNACKVIIDVLDVNDNSPSINILSSSHSVSEGSKFGTVIAMLNVDDLDSGASGQVQCVMSEEIPFVIKSQSSNFFSLQTEQELDRERETEYNISVICSDEGVPSLSSSVSLTVQISDVNDNPPVFKKSNYEAFVMENNTPGLSIFTVKASDADWNQNARVSYILEDSTVSGVSVSSYVSVHPDSGLITAVRSFDYETLKDFHFRVKAQDGGSPPLSSNVTVKVTVQDQNDNAPQVLYPVQTGTSVVAEIVPRAADVGYLVTKVVAVDVDSGQNAWLSYKLQKAPDRALFEVGLQNGEIRTVRQVTDKDAVKQKLTVVVEDNGQPSRSAVVSINVAVADSFPEVLSEFTDFTHEKQYNDSLTFYLVLALAAVSFLFITCVVVIISVKIYRWRQSRFLYQSNLPVIPYYPPHYADTGVTGTLPHGYNYEVCMTTDSRKSDCKFSTLGGQNVLVVDPSFAETMKHTIKKNSSIDDLQSTESQKPPNTDWRFPPNQRPGPSGAGARPEEAGAGAGVIAGTGPWPNPPTEAEQLQAMMAAANASEATATLGPRYNLQYGPDYRQNVYIPGSTATLTANPQQQVLQQALPPPQALPPTEVPKAAQTPASKKKPTKKDKK

Target ORF information:

RefSeq Version	NM_001020778.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio protocadherin 1 gamma b 9 (pcdh1gb9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001020778.2

ORF Insert Sequence:

ATGAAGACAA TGCTTGATGC AATGATACAG CACTCGGTGC TGATTTTGAC TCTTCTGGTT 
TACATAGCGC GAGGACAGGT CAGTTACTCC ATTCCAGAAG AAATGGCAAA AGGATCGATG 
GTTGGAAACA TCGCGCAGGA TTTGGGTTTG GATTTACAAC GACTGAAGTC TGGAAAAGCA 
CGAATTTTTT CAAGAGACAG CACAGAATAC ATCGAACTGA ACAGAAACAC GGGATTGCTG 
CTCATCAAAG AGAAAATGGA TCGCGAGTCT CTTTGTGCAA AAACAACACC GTGTGCTTTA 
CACCTTCAAA TGATTTTGGA TAACCCGATG GAATTATACA CAATAACGGT GGAAATCACT 
GATATAAATG ATAACGCTCC AAATTTCCAG AAAAGAGACT TTAAATTTGA GATCAGCGAA 
TCGGCGATGG TAGGAGCTCG TTTTATGCTC GGGAAAGCTT TTGATCCGGA TGTAGGAACA 
AATTCACTTC AAAGCTACTC GCTCAAACCG ACAGATAAAT TCCGGCTTGA ATTGCAAAGT 
CAAGCAGATG GTAGTAAAAA CGTCGAGATG ATTTTACAAA AAGCACTTGA CAGAGAAATG 
CAAAGCTCGT TTACTCTGCT GTTAGAAGCG TTTGATGGAG GCGACCCAGT GCTCTCTGGT 
ACTGTACAGA TACATATTGC TGTATTAGAT ATTAATGATA ACGCGCCTGT ATTTATGCAG 
AAGGAATATA AAGCAACAGC AACAGAAGAG GCACCAAAAG GTAGCATATT AACAGTCGTG 
AGCGCAACTG ATACAGATGA AGGATCCAAC AGTGAAGTAA CGTACTACAT ATCGGACACA 
ATGGACAGTG TTATGGCCGA TATGTTTCTT GTTAATGAAC AAACTGGAGA ACTGATATTA 
AATGGTCACT TTGACTATGA AAAAGTGAGC CACTATGAAC TTACGATTCA TGCAAAAGAT 
CAAGGAGGTC TCTCTAACGC ATGCAAAGTA ATTATTGATG TGCTGGATGT CAATGATAAT 
TCACCAAGTA TCAATATTCT GTCTAGTTCC CATTCAGTAT CCGAAGGATC CAAATTTGGT 
ACTGTAATAG CAATGCTAAA TGTTGATGAT CTTGATTCAG GTGCAAGTGG TCAGGTTCAG 
TGTGTGATGA GTGAGGAAAT CCCTTTTGTT ATTAAGTCTC AATCTAGCAA TTTCTTCAGC 
TTGCAAACAG AGCAGGAGCT GGACAGAGAA CGAGAAACTG AGTATAATAT CAGTGTGATA 
TGTAGTGATG AGGGAGTGCC TTCGCTCTCC AGTAGCGTCT CTCTTACTGT GCAGATATCA 
GATGTGAATG ATAATCCTCC TGTCTTTAAG AAGAGTAACT ATGAGGCCTT TGTGATGGAG 
AATAACACAC CTGGTCTCTC TATATTCACA GTAAAAGCCA GTGATGCTGA CTGGAATCAG 
AATGCTCGTG TTTCTTATAT TCTAGAAGAC AGCACTGTTA GTGGAGTCTC GGTCTCATCA 
TATGTGTCAG TGCACCCTGA CAGCGGACTG ATTACAGCTG TGCGCTCTTT TGACTATGAG 
ACACTGAAAG ATTTCCACTT CCGCGTAAAA GCGCAGGACG GAGGCTCTCC TCCGCTCAGT 
AGTAACGTCA CAGTGAAAGT TACTGTTCAA GACCAGAATG ACAACGCTCC TCAGGTTCTG 
TATCCAGTAC AGACTGGCAC TTCGGTGGTG GCTGAAATTG TGCCTCGTGC TGCAGATGTT 
GGATATCTGG TCACTAAAGT GGTGGCTGTT GATGTGGACT CTGGTCAGAA TGCCTGGCTC 
TCCTATAAAC TCCAGAAAGC TCCAGACAGA GCGCTGTTTG AAGTGGGCTT ACAGAATGGA 
GAAATACGAA CTGTGCGACA AGTCACTGAT AAAGATGCTG TCAAACAAAA ACTCACTGTT 
GTTGTGGAGG ATAACGGACA GCCCTCTCGC TCAGCTGTGG TCTCCATTAA CGTGGCTGTG 
GCTGACAGCT TTCCTGAAGT GCTGTCAGAG TTCACAGACT TTACGCATGA GAAACAATAT 
AACGACAGCT TAACTTTTTA TTTAGTTCTC GCACTGGCCG CTGTTTCTTT CCTATTCATC 
ACTTGTGTGG TTGTGATAAT ATCCGTTAAA ATCTACAGAT GGAGACAATC TCGCTTCCTC 
TATCAGTCCA ATCTGCCTGT TATTCCGTAC TATCCACCGC ATTACGCAGA CACAGGAGTC 
ACTGGAACTC TGCCGCACGG CTATAACTAT GAAGTGTGCA TGACGACTGA CTCGAGGAAG 
AGTGACTGTA AGTTTTCTAC TCTTGGCGGA CAGAATGTTT TAGTGGTGGA TCCGAGTTTC 
GCAGAAACTA TGAAGCACAC AATAAAGAAA AATAGTTCCA TTGACGATCT GCAGTCTACG 
GAATCGCAAA AGCCACCTAA TACTGACTGG CGATTTCCCC CAAACCAGAG GCCTGGACCC 
AGCGGGGCTG GAGCACGTCC TGAAGAGGCA GGTGCCGGTG CTGGTGTGAT AGCAGGAACA 
GGACCATGGC CCAACCCCCC TACTGAGGCT GAACAGCTCC AGGCTATGAT GGCAGCAGCA 
AACGCAAGTG AAGCCACTGC GACTCTTGGC CCTCGCTACA ATCTACAGTA TGGCCCGGAT 
TACCGTCAGA ACGTCTACAT CCCAGGCAGC ACTGCCACCC TTACAGCCAA CCCTCAGCAA 
CAGGTTCTCC AGCAGGCCCT TCCTCCACCA CAGGCCCTTC CACCTACCGA AGTCCCCAAA 
GCGGCTCAAA CACCAGCCAG TAAGAAGAAA CCCACAAAGA AAGACAAGAA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

pcdh1gb9 ( NM_001020778.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001018614.3 Danio rerio protocadherin 1 gamma b 9 (pcdh1gb9), mRNA.

Price & Availability↑

CloneID	ODa159727
Clone ID Related Accession (Same CDS sequence)	NM_001020778.3
Accession Version	NM_001020778.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2814bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1553097600000
Organism	Danio rerio(zebrafish)
Product	protocadherin 1 gamma b 9 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT737184.6 and CR774179.7. On Aug 25, 2018 this sequence version replaced NM_001020778.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END##

ATGAAGACAA TGCTTGATGC AATGATACAG CACTCGGTGC TGATTTTGAC TCTTCTGGTT 
TACATAGCGC GAGGACAGGT CAGTTACTCC ATTCCAGAAG AAATGGCAAA AGGATCGATG 
GTTGGAAACA TCGCGCAGGA TTTGGGTTTG GATTTACAAC GACTGAAGTC TGGAAAAGCA 
CGAATTTTTT CAAGAGACAG CACAGAATAC ATCGAACTGA ACAGAAACAC GGGATTGCTG 
CTCATCAAAG AGAAAATGGA TCGCGAGTCT CTTTGTGCAA AAACAACACC GTGTGCTTTA 
CACCTTCAAA TGATTTTGGA TAACCCGATG GAATTATACA CAATAACGGT GGAAATCACT 
GATATAAATG ATAACGCTCC AAATTTCCAG AAAAGAGACT TTAAATTTGA GATCAGCGAA 
TCGGCGATGG TAGGAGCTCG TTTTATGCTC GGGAAAGCTT TTGATCCGGA TGTAGGAACA 
AATTCACTTC AAAGCTACTC GCTCAAACCG ACAGATAAAT TCCGGCTTGA ATTGCAAAGT 
CAAGCAGATG GTAGTAAAAA CGTCGAGATG ATTTTACAAA AAGCACTTGA CAGAGAAATG 
CAAAGCTCGT TTACTCTGCT GTTAGAAGCG TTTGATGGAG GCGACCCAGT GCTCTCTGGT 
ACTGTACAGA TACATATTGC TGTATTAGAT ATTAATGATA ACGCGCCTGT ATTTATGCAG 
AAGGAATATA AAGCAACAGC AACAGAAGAG GCACCAAAAG GTAGCATATT AACAGTCGTG 
AGCGCAACTG ATACAGATGA AGGATCCAAC AGTGAAGTAA CGTACTACAT ATCGGACACA 
ATGGACAGTG TTATGGCCGA TATGTTTCTT GTTAATGAAC AAACTGGAGA ACTGATATTA 
AATGGTCACT TTGACTATGA AAAAGTGAGC CACTATGAAC TTACGATTCA TGCAAAAGAT 
CAAGGAGGTC TCTCTAACGC ATGCAAAGTA ATTATTGATG TGCTGGATGT CAATGATAAT 
TCACCAAGTA TCAATATTCT GTCTAGTTCC CATTCAGTAT CCGAAGGATC CAAATTTGGT 
ACTGTAATAG CAATGCTAAA TGTTGATGAT CTTGATTCAG GTGCAAGTGG TCAGGTTCAG 
TGTGTGATGA GTGAGGAAAT CCCTTTTGTT ATTAAGTCTC AATCTAGCAA TTTCTTCAGC 
TTGCAAACAG AGCAGGAGCT GGACAGAGAA CGAGAAACTG AGTATAATAT CAGTGTGATA 
TGTAGTGATG AGGGAGTGCC TTCGCTCTCC AGTAGCGTCT CTCTTACTGT GCAGATATCA 
GATGTGAATG ATAATCCTCC TGTCTTTAAG AAGAGTAACT ATGAGGCCTT TGTGATGGAG 
AATAACACAC CTGGTCTCTC TATATTCACA GTAAAAGCCA GTGATGCTGA CTGGAATCAG 
AATGCTCGTG TTTCTTATAT TCTAGAAGAC AGCACTGTTA GTGGAGTCTC GGTCTCATCA 
TATGTGTCAG TGCACCCTGA CAGCGGACTG ATTACAGCTG TGCGCTCTTT TGACTATGAG 
ACACTGAAAG ATTTCCACTT CCGCGTAAAA GCGCAGGACG GAGGCTCTCC TCCGCTCAGT 
AGTAACGTCA CAGTGAAAGT TACTGTTCAA GACCAGAATG ACAACGCTCC TCAGGTTCTG 
TATCCAGTAC AGACTGGCAC TTCGGTGGTG GCTGAAATTG TGCCTCGTGC TGCAGATGTT 
GGATATCTGG TCACTAAAGT GGTGGCTGTT GATGTGGACT CTGGTCAGAA TGCCTGGCTC 
TCCTATAAAC TCCAGAAAGC TCCAGACAGA GCGCTGTTTG AAGTGGGCTT ACAGAATGGA 
GAAATACGAA CTGTGCGACA AGTCACTGAT AAAGATGCTG TCAAACAAAA ACTCACTGTT 
GTTGTGGAGG ATAACGGACA GCCCTCTCGC TCAGCTGTGG TCTCCATTAA CGTGGCTGTG 
GCTGACAGCT TTCCTGAAGT GCTGTCAGAG TTCACAGACT TTACGCATGA GAAACAATAT 
AACGACAGCT TAACTTTTTA TTTAGTTCTC GCACTGGCCG CTGTTTCTTT CCTATTCATC 
ACTTGTGTGG TTGTGATAAT ATCCGTTAAA ATCTACAGAT GGAGACAATC TCGCTTCCTC 
TATCAGTCCA ATCTGCCTGT TATTCCGTAC TATCCACCGC ATTACGCAGA CACAGGAGTC 
ACTGGAACTC TGCCGCACGG CTATAACTAT GAAGTGTGCA TGACGACTGA CTCGAGGAAG 
AGTGACTGTA AGTTTTCTAC TCTTGGCGGA CAGAATGTTT TAGTGGTGGA TCCGAGTTTC 
GCAGAAACTA TGAAGCACAC AATAAAGAAA AATAGTTCCA TTGACGATCT GCAGTCTACG 
GAATCGCAAA AGCCACCTAA TACTGACTGG CGATTTCCCC CAAACCAGAG GCCTGGACCC 
AGCGGGGCTG GAGCACGTCC TGAAGAGGCA GGTGCCGGTG CTGGTGTGAT AGCAGGAACA 
GGACCATGGC CCAACCCCCC TACTGAGGCT GAACAGCTCC AGGCTATGAT GGCAGCAGCA 
AACGCAAGTG AAGCCACTGC GACTCTTGGC CCTCGCTACA ATCTACAGTA TGGCCCGGAT 
TACCGTCAGA ACGTCTACAT CCCAGGCAGC ACTGCCACCC TTACAGCCAA CCCTCAGCAA 
CAGGTTCTCC AGCAGGCCCT TCCTCCACCA CAGGCCCTTC CACCTACCGA AGCCCCCAAA 
GCGGCTCAAA CACCAGCCAG TAAGAAGAAA CCCACAAAGA AAGACAAGAA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001018614.3
CDS	1..2814
Translation	MKTMLDAMIQHSVLILTLLVYIARGQVSYSIPEEMAKGSMVGNIAQDLGLDLQRLKSGKARIFSRDSTEYIELNRNTGLLLIKEKMDRESLCAKTTPCALHLQMILDNPMELYTITVEITDINDNAPNFQKRDFKFEISESAMVGARFMLGKAFDPDVGTNSLQSYSLKPTDKFRLELQSQADGSKNVEMILQKALDREMQSSFTLLLEAFDGGDPVLSGTVQIHIAVLDINDNAPVFMQKEYKATATEEAPKGSILTVVSATDTDEGSNSEVTYYISDTMDSVMADMFLVNEQTGELILNGHFDYEKVSHYELTIHAKDQGGLSNACKVIIDVLDVNDNSPSINILSSSHSVSEGSKFGTVIAMLNVDDLDSGASGQVQCVMSEEIPFVIKSQSSNFFSLQTEQELDRERETEYNISVICSDEGVPSLSSSVSLTVQISDVNDNPPVFKKSNYEAFVMENNTPGLSIFTVKASDADWNQNARVSYILEDSTVSGVSVSSYVSVHPDSGLITAVRSFDYETLKDFHFRVKAQDGGSPPLSSNVTVKVTVQDQNDNAPQVLYPVQTGTSVVAEIVPRAADVGYLVTKVVAVDVDSGQNAWLSYKLQKAPDRALFEVGLQNGEIRTVRQVTDKDAVKQKLTVVVEDNGQPSRSAVVSINVAVADSFPEVLSEFTDFTHEKQYNDSLTFYLVLALAAVSFLFITCVVVIISVKIYRWRQSRFLYQSNLPVIPYYPPHYADTGVTGTLPHGYNYEVCMTTDSRKSDCKFSTLGGQNVLVVDPSFAETMKHTIKKNSSIDDLQSTESQKPPNTDWRFPPNQRPGPSGAGARPEEAGAGAGVIAGTGPWPNPPTEAEQLQAMMAAANASEATATLGPRYNLQYGPDYRQNVYIPGSTATLTANPQQQVLQQALPPPQALPPTEAPKAAQTPASKKKPTKKDKK

Target ORF information:

RefSeq Version	NM_001020778.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio protocadherin 1 gamma b 9 (pcdh1gb9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001020778.3

ORF Insert Sequence:

ATGAAGACAA TGCTTGATGC AATGATACAG CACTCGGTGC TGATTTTGAC TCTTCTGGTT 
TACATAGCGC GAGGACAGGT CAGTTACTCC ATTCCAGAAG AAATGGCAAA AGGATCGATG 
GTTGGAAACA TCGCGCAGGA TTTGGGTTTG GATTTACAAC GACTGAAGTC TGGAAAAGCA 
CGAATTTTTT CAAGAGACAG CACAGAATAC ATCGAACTGA ACAGAAACAC GGGATTGCTG 
CTCATCAAAG AGAAAATGGA TCGCGAGTCT CTTTGTGCAA AAACAACACC GTGTGCTTTA 
CACCTTCAAA TGATTTTGGA TAACCCGATG GAATTATACA CAATAACGGT GGAAATCACT 
GATATAAATG ATAACGCTCC AAATTTCCAG AAAAGAGACT TTAAATTTGA GATCAGCGAA 
TCGGCGATGG TAGGAGCTCG TTTTATGCTC GGGAAAGCTT TTGATCCGGA TGTAGGAACA 
AATTCACTTC AAAGCTACTC GCTCAAACCG ACAGATAAAT TCCGGCTTGA ATTGCAAAGT 
CAAGCAGATG GTAGTAAAAA CGTCGAGATG ATTTTACAAA AAGCACTTGA CAGAGAAATG 
CAAAGCTCGT TTACTCTGCT GTTAGAAGCG TTTGATGGAG GCGACCCAGT GCTCTCTGGT 
ACTGTACAGA TACATATTGC TGTATTAGAT ATTAATGATA ACGCGCCTGT ATTTATGCAG 
AAGGAATATA AAGCAACAGC AACAGAAGAG GCACCAAAAG GTAGCATATT AACAGTCGTG 
AGCGCAACTG ATACAGATGA AGGATCCAAC AGTGAAGTAA CGTACTACAT ATCGGACACA 
ATGGACAGTG TTATGGCCGA TATGTTTCTT GTTAATGAAC AAACTGGAGA ACTGATATTA 
AATGGTCACT TTGACTATGA AAAAGTGAGC CACTATGAAC TTACGATTCA TGCAAAAGAT 
CAAGGAGGTC TCTCTAACGC ATGCAAAGTA ATTATTGATG TGCTGGATGT CAATGATAAT 
TCACCAAGTA TCAATATTCT GTCTAGTTCC CATTCAGTAT CCGAAGGATC CAAATTTGGT 
ACTGTAATAG CAATGCTAAA TGTTGATGAT CTTGATTCAG GTGCAAGTGG TCAGGTTCAG 
TGTGTGATGA GTGAGGAAAT CCCTTTTGTT ATTAAGTCTC AATCTAGCAA TTTCTTCAGC 
TTGCAAACAG AGCAGGAGCT GGACAGAGAA CGAGAAACTG AGTATAATAT CAGTGTGATA 
TGTAGTGATG AGGGAGTGCC TTCGCTCTCC AGTAGCGTCT CTCTTACTGT GCAGATATCA 
GATGTGAATG ATAATCCTCC TGTCTTTAAG AAGAGTAACT ATGAGGCCTT TGTGATGGAG 
AATAACACAC CTGGTCTCTC TATATTCACA GTAAAAGCCA GTGATGCTGA CTGGAATCAG 
AATGCTCGTG TTTCTTATAT TCTAGAAGAC AGCACTGTTA GTGGAGTCTC GGTCTCATCA 
TATGTGTCAG TGCACCCTGA CAGCGGACTG ATTACAGCTG TGCGCTCTTT TGACTATGAG 
ACACTGAAAG ATTTCCACTT CCGCGTAAAA GCGCAGGACG GAGGCTCTCC TCCGCTCAGT 
AGTAACGTCA CAGTGAAAGT TACTGTTCAA GACCAGAATG ACAACGCTCC TCAGGTTCTG 
TATCCAGTAC AGACTGGCAC TTCGGTGGTG GCTGAAATTG TGCCTCGTGC TGCAGATGTT 
GGATATCTGG TCACTAAAGT GGTGGCTGTT GATGTGGACT CTGGTCAGAA TGCCTGGCTC 
TCCTATAAAC TCCAGAAAGC TCCAGACAGA GCGCTGTTTG AAGTGGGCTT ACAGAATGGA 
GAAATACGAA CTGTGCGACA AGTCACTGAT AAAGATGCTG TCAAACAAAA ACTCACTGTT 
GTTGTGGAGG ATAACGGACA GCCCTCTCGC TCAGCTGTGG TCTCCATTAA CGTGGCTGTG 
GCTGACAGCT TTCCTGAAGT GCTGTCAGAG TTCACAGACT TTACGCATGA GAAACAATAT 
AACGACAGCT TAACTTTTTA TTTAGTTCTC GCACTGGCCG CTGTTTCTTT CCTATTCATC 
ACTTGTGTGG TTGTGATAAT ATCCGTTAAA ATCTACAGAT GGAGACAATC TCGCTTCCTC 
TATCAGTCCA ATCTGCCTGT TATTCCGTAC TATCCACCGC ATTACGCAGA CACAGGAGTC 
ACTGGAACTC TGCCGCACGG CTATAACTAT GAAGTGTGCA TGACGACTGA CTCGAGGAAG 
AGTGACTGTA AGTTTTCTAC TCTTGGCGGA CAGAATGTTT TAGTGGTGGA TCCGAGTTTC 
GCAGAAACTA TGAAGCACAC AATAAAGAAA AATAGTTCCA TTGACGATCT GCAGTCTACG 
GAATCGCAAA AGCCACCTAA TACTGACTGG CGATTTCCCC CAAACCAGAG GCCTGGACCC 
AGCGGGGCTG GAGCACGTCC TGAAGAGGCA GGTGCCGGTG CTGGTGTGAT AGCAGGAACA 
GGACCATGGC CCAACCCCCC TACTGAGGCT GAACAGCTCC AGGCTATGAT GGCAGCAGCA 
AACGCAAGTG AAGCCACTGC GACTCTTGGC CCTCGCTACA ATCTACAGTA TGGCCCGGAT 
TACCGTCAGA ACGTCTACAT CCCAGGCAGC ACTGCCACCC TTACAGCCAA CCCTCAGCAA 
CAGGTTCTCC AGCAGGCCCT TCCTCCACCA CAGGCCCTTC CACCTACCGA AGCCCCCAAA 
GCGGCTCAAA CACCAGCCAG TAAGAAGAAA CCCACAAAGA AAGACAAGAA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Comparative genomics and diversifying selection of the clustered vertebrate protocadherin genes.
Genetics169(4)2179-88(2005 Apr)
Wu Q

Genomic organization and transcripts of the zebrafish Protocadherin genes.
Gene340(2)197-211(2004 Oct)
Tada MN,Senzaki K,Tai Y,Morishita H,Tanaka YZ,Murata Y,Ishii Y,Asakawa S,Shimizu N,Sugino H,Yagi T

Gene conversion and the evolution of protocadherin gene cluster diversity.
Genome research14(3)354-66(2004 Mar)
Noonan JP,Grimwood J,Schmutz J,Dickson M,Myers RM

Multiple variable first exons: a mechanism for cell- and tissue-specific gene regulation.
Genome research14(1)79-89(2004 Jan)
Zhang T,Haws P,Wu Q

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pcdh1gb9 cDNA ORF clone, Danio rerio(zebrafish)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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