capn9 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	capn9
Entrez Gene ID	445107
Full Name	calpain 9
Synonyms	cb545,wu:fb77d06,zgc:92451
General protein information	Preferred Names calpain 9 Names calpain-9 fb77d06
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001003501.1	NP_001003501.1	calpain-9

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Capn9	NP_076198.2
Homo sapiens (human)	CAPN9	NP_006606.1
Rattus norvegicus (Norway rat)	Capn9	NP_001258069.1
Gallus gallus (chicken)	CAPN9	XP_419585.2
Danio rerio (zebrafish)	capn9	NP_001003501.1
Pan troglodytes (chimpanzee)	CAPN9	XP_001148632.1
Drosophila melanogaster (fruit fly)	CalpB	NP_001246706.1
Drosophila melanogaster (fruit fly)	CalpA	NP_001097378.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP012068	XP_001238322.2
Canis lupus familiaris (dog)	CAPN9	XP_850025.2
Xenopus tropicalis (tropical clawed frog)	capn9	NP_001121483.1
Macaca mulatta (Rhesus monkey)	CAPN9	XP_002802168.1

Gene Ontology
Bibliography

Related articles in PubMed

PTC-bearing mRNA elicits a genetic compensation response via Upf3a and COMPASS components.
Ma Z, Zhu P, Shi H, Guo L, Zhang Q, Chen Y, Chen S, Zhang Z, Peng J, Chen J
Nature568(7751)259-263(2019 04)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

A Pou5f1/Oct4 dependent Klf2a, Klf2b, and Klf17 regulatory sub-network contributes to EVL and ectoderm development during zebrafish embryogenesis.
Kotkamp K, Mössner R, Allen A, Onichtchouk D, Driever W
Developmental biology385(2)433-47(2014 Jan)

Def defines a conserved nucleolar pathway that leads p53 to proteasome-independent degradation.
Tao T, Shi H, Guan Y, Huang D, Chen Y, Lane DP, Chen J, Peng J
Cell research23(5)620-34(2013 May)

Interferon regulatory factor 6 promotes differentiation of the periderm by activating expression of Grainyhead-like 3.
de la Garza G, Schleiffarth JR, Dunnwald M, Mankad A, Weirather JL, Bonde G, Butcher S, Mansour TA, Kousa YA, Fukazawa CF, Houston DW, Manak JR, Schutte BC, Wagner DS, Cornell RA
The Journal of investigative dermatology133(1)68-77(2013 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following capn9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the capn9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa00311	NM_001003501.1 Latest version!	Danio rerio calpain 9 (capn9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

capn9 ( NM_001003501.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001003501.1 Danio rerio calpain 9 (capn9), mRNA.

Price & Availability↑

CloneID	ODa00311
Clone ID Related Accession (Same CDS sequence)	NM_001003501.1
Accession Version	NM_001003501.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2067bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1565971200000
Organism	Danio rerio(zebrafish)
Product	calpain-9
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076509.1. ##Evidence-Data-START## Transcript exon combination :: BC076509.1, BC165218.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGCCCTACA GCGTGACTCT GCCGGGCAGC TCAGGACAGA CGGCTGTAGT GGAGAGCACA 
CAGGCTGATG GCAAGACATA CGAGCAGCTG CGGAGGGAAT GTTTGCAGAA GGGGAAGCTG 
TTCGAGGATC CAGACTTCCC TGCGGTGGAC GGCTCGCTCT TCTACAGCCA GAGGGTCCCG 
GTTAACTTTG AATGGAAGCG GCCCGGGGAA ATTTGCAAAG AGCCACAGTT CATCACCGGA 
GGAGCCACCA GGACCGACAT CTGTCAGGGG CAGCTGGGAG ACTGTTGGCT GTTGGCAGCG 
ATTGCCTCTT TAACTCTCAA AGAGGAAACT CTAAATAGAG TTGTGCCAAA TGACCAAACC 
TTCGATCGCG GTTACGCTGG AATCTTCCAT TTTCAGTTCT GGCAGCATAA CAAATGGATG 
GATGTGGTGG TGGACGACAG GCTCCCGTGT GTGAGAGACA AACTGGTGTT CCTCCACTCC 
GCTGACAACA ACGAGTTCTG GAGTGCACTT CTGGAAAAGG CCTATGCCAA GCTGAACGGC 
AGCTATGAAG CCCTGAAAGG TGGAAGCACA ATGGAGGCCA TGGAGGACTT TACTGGAGGT 
GTGGGTGAGA TGTACGAGAC GAAAAACGGA CCCAGCAACC TCTTCCTCAT CCTCAAGAAA 
GCCATAGAGA GGGGGTCCAT GCTTGGCTGC TCCATCGACA TCACTAGTTC TGCTGAATCT 
GAAGCCCAAA CCTCTACTGG TCTGGTGAAA GGCCACGCTT ACTCCGTCAC TGGAGTGGAA 
GAGGTCAACT ACAGAGGAGC GAAGGTCCAG CTGATTCGTG TACGTAACCC CTGGGGTCAG 
GTGGAGTGGA ACGGGCCGTG GAGTGACAAT TCGAGAGAAT GGACTGTCAT TGACAGCTCA 
GAGAAGAAAC GATTGCTGCA AAACTCCCTG GATGATGGAG AGTTCTGGAT GGAGTTCGGA 
GACTTTAAAT CCAACTACGA TAAGGTTGAG ATCTGTAACC TGTCTCCAGA TGCTCTGTCC 
GATGACGTTT CCAAGCAGTG GGCTGTGAAC CTGTTTGAGG GCAGCTGGAT CAGGGGGTCC 
ACCGCTGGCG GCTGCAGGAA CTACATTGAC ACATTCTGGA CAAACCCCCA GTTTAAGCTT 
CATCTGGAAA ATCCGGATGA TGGTGATAAG CTGTGCAGCG TCATTGTGGC CCTGATGCAA 
AAGAACCGCC GACGACTAAG AAAAGAGGGG CTTGACCTGG AGACCATTGG GTTTGCTATT 
TATGAGGCTC CCGATGATCA AGACCACCAG GGCAAAGATT TTTTCCGCTA TAATCCCTCT 
AAAGCACGGA GCCGTACTTA TATCAACGTG AGGGAGGTTT CCGAGCGCTT CAGACTGCCG 
CCTGGAAACT ACCTGCTGGT GCCCACCACC TTTCAGCCGC ACAAAGAGGC TGATTTCCTC 
ATCCGCCTCT TCTCTGAGAA GAAAGCTGGA GCCATTGAGG TGGGAAACAA AATTGAAGCT 
GATCTGCCAG AGCCACCGAA ACCAAACCCA CCTGAAGAGG AGACTGATGA GGAGAAAGGC 
CTGAGGAAAC TCTTTGAACA GGTCGCTGGA CCGGATAATG TCATCAGCGC CAGAGAACTG 
CAGCACGTGC TGAACAATGT CCTGGGAAGA AGGAAAGAAG TGAAGTTTGA TGGTCTGAGC 
CTCAACACCT GCATCAGCAT CATAAACCTG ATGGATGTGG ATGGATCAGG AATGATGGAA 
TTTTCCGAGT TCAAAGTCTT CTGGGATAAA CTCAAGAAGT GGATCATGCT GTTTCTGTCT 
TATGATGTGG ATCGTTCTGG AACCATGTCT TCCTATGAGC TCCGCAGCGC TCTTAATGCT 
GCAGGGATGA AGCTGAACAA CAGGATTCTG CAGCTGCTGG GTCTGCGGTT CGCAGATGAG 
AAATTAGAAA TCGATTTTGA CGATTACCTG ACGTGCATCG TGCGTCTGGA GAACATGTTT 
CGTATTTTCC AGGCCTTAGA TGCACAGAAG AAAGGAGAGG TCAGCCTGAA CATGCATCAG 
TTCCTGTTGT TGACCATGAA CGTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001003501.1
CDS	50..2116
Translation	MPYSVTLPGSSGQTAVVESTQADGKTYEQLRRECLQKGKLFEDPDFPAVDGSLFYSQRVPVNFEWKRPGEICKEPQFITGGATRTDICQGQLGDCWLLAAIASLTLKEETLNRVVPNDQTFDRGYAGIFHFQFWQHNKWMDVVVDDRLPCVRDKLVFLHSADNNEFWSALLEKAYAKLNGSYEALKGGSTMEAMEDFTGGVGEMYETKNGPSNLFLILKKAIERGSMLGCSIDITSSAESEAQTSTGLVKGHAYSVTGVEEVNYRGAKVQLIRVRNPWGQVEWNGPWSDNSREWTVIDSSEKKRLLQNSLDDGEFWMEFGDFKSNYDKVEICNLSPDALSDDVSKQWAVNLFEGSWIRGSTAGGCRNYIDTFWTNPQFKLHLENPDDGDKLCSVIVALMQKNRRRLRKEGLDLETIGFAIYEAPDDQDHQGKDFFRYNPSKARSRTYINVREVSERFRLPPGNYLLVPTTFQPHKEADFLIRLFSEKKAGAIEVGNKIEADLPEPPKPNPPEEETDEEKGLRKLFEQVAGPDNVISARELQHVLNNVLGRRKEVKFDGLSLNTCISIINLMDVDGSGMMEFSEFKVFWDKLKKWIMLFLSYDVDRSGTMSSYELRSALNAAGMKLNNRILQLLGLRFADEKLEIDFDDYLTCIVRLENMFRIFQALDAQKKGEVSLNMHQFLLLTMNV

Target ORF information:

RefSeq Version	NM_001003501.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio calpain 9 (capn9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001003501.1

ORF Insert Sequence:

ATGCCCTACA GCGTGACTCT GCCGGGCAGC TCAGGACAGA CGGCTGTAGT GGAGAGCACA 
CAGGCTGATG GCAAGACATA CGAGCAGCTG CGGAGGGAAT GTTTGCAGAA GGGGAAGCTG 
TTCGAGGATC CAGACTTCCC TGCGGTGGAC GGCTCGCTCT TCTACAGCCA GAGGGTCCCG 
GTTAACTTTG AATGGAAGCG GCCCGGGGAA ATTTGCAAAG AGCCACAGTT CATCACCGGA 
GGAGCCACCA GGACCGACAT CTGTCAGGGG CAGCTGGGAG ACTGTTGGCT GTTGGCAGCG 
ATTGCCTCTT TAACTCTCAA AGAGGAAACT CTAAATAGAG TTGTGCCAAA TGACCAAACC 
TTCGATCGCG GTTACGCTGG AATCTTCCAT TTTCAGTTCT GGCAGCATAA CAAATGGATG 
GATGTGGTGG TGGACGACAG GCTCCCGTGT GTGAGAGACA AACTGGTGTT CCTCCACTCC 
GCTGACAACA ACGAGTTCTG GAGTGCACTT CTGGAAAAGG CCTATGCCAA GCTGAACGGC 
AGCTATGAAG CCCTGAAAGG TGGAAGCACA ATGGAGGCCA TGGAGGACTT TACTGGAGGT 
GTGGGTGAGA TGTACGAGAC GAAAAACGGA CCCAGCAACC TCTTCCTCAT CCTCAAGAAA 
GCCATAGAGA GGGGGTCCAT GCTTGGCTGC TCCATCGACA TCACTAGTTC TGCTGAATCT 
GAAGCCCAAA CCTCTACTGG TCTGGTGAAA GGCCACGCTT ACTCCGTCAC TGGAGTGGAA 
GAGGTCAACT ACAGAGGAGC GAAGGTCCAG CTGATTCGTG TACGTAACCC CTGGGGTCAG 
GTGGAGTGGA ACGGGCCGTG GAGTGACAAT TCGAGAGAAT GGACTGTCAT TGACAGCTCA 
GAGAAGAAAC GATTGCTGCA AAACTCCCTG GATGATGGAG AGTTCTGGAT GGAGTTCGGA 
GACTTTAAAT CCAACTACGA TAAGGTTGAG ATCTGTAACC TGTCTCCAGA TGCTCTGTCC 
GATGACGTTT CCAAGCAGTG GGCTGTGAAC CTGTTTGAGG GCAGCTGGAT CAGGGGGTCC 
ACCGCTGGCG GCTGCAGGAA CTACATTGAC ACATTCTGGA CAAACCCCCA GTTTAAGCTT 
CATCTGGAAA ATCCGGATGA TGGTGATAAG CTGTGCAGCG TCATTGTGGC CCTGATGCAA 
AAGAACCGCC GACGACTAAG AAAAGAGGGG CTTGACCTGG AGACCATTGG GTTTGCTATT 
TATGAGGCTC CCGATGATCA AGACCACCAG GGCAAAGATT TTTTCCGCTA TAATCCCTCT 
AAAGCACGGA GCCGTACTTA TATCAACGTG AGGGAGGTTT CCGAGCGCTT CAGACTGCCG 
CCTGGAAACT ACCTGCTGGT GCCCACCACC TTTCAGCCGC ACAAAGAGGC TGATTTCCTC 
ATCCGCCTCT TCTCTGAGAA GAAAGCTGGA GCCATTGAGG TGGGAAACAA AATTGAAGCT 
GATCTGCCAG AGCCACCGAA ACCAAACCCA CCTGAAGAGG AGACTGATGA GGAGAAAGGC 
CTGAGGAAAC TCTTTGAACA GGTCGCTGGA CCGGATAATG TCATCAGCGC CAGAGAACTG 
CAGCACGTGC TGAACAATGT CCTGGGAAGA AGGAAAGAAG TGAAGTTTGA TGGTCTGAGC 
CTCAACACCT GCATCAGCAT CATAAACCTG ATGGATGTGG ATGGATCAGG AATGATGGAA 
TTTTCCGAGT TCAAAGTCTT CTGGGATAAA CTCAAGAAGT GGATCATGCT GTTTCTGTCT 
TATGATGTGG ATCGTTCTGG AACCATGTCT TCCTATGAGC TCCGCAGCGC TCTTAATGCT 
GCAGGGATGA AGCTGAACAA CAGGATTCTG CAGCTGCTGG GTCTGCGGTT CGCAGATGAG 
AAATTAGAAA TCGATTTTGA CGATTACCTG ACGTGCATCG TGCGTCTGGA GAACATGTTT 
CGTATTTTCC AGGCCTTAGA TGCACAGAAG AAAGGAGAGG TCAGCCTGAA CATGCATCAG 
TTCCTGTTGT TGACCATGAA CGTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

PTC-bearing mRNA elicits a genetic compensation response via Upf3a and COMPASS components.
Nature568(7751)259-263(2019 04)
Ma Z,Zhu P,Shi H,Guo L,Zhang Q,Chen Y,Chen S,Zhang Z,Peng J,Chen J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

A Pou5f1/Oct4 dependent Klf2a, Klf2b, and Klf17 regulatory sub-network contributes to EVL and ectoderm development during zebrafish embryogenesis.
Developmental biology385(2)433-47(2014 Jan)
Kotkamp K,Mössner R,Allen A,Onichtchouk D,Driever W

Def defines a conserved nucleolar pathway that leads p53 to proteasome-independent degradation.
Cell research23(5)620-34(2013 May)
Tao T,Shi H,Guan Y,Huang D,Chen Y,Lane DP,Chen J,Peng J

Interferon regulatory factor 6 promotes differentiation of the periderm by activating expression of Grainyhead-like 3.
The Journal of investigative dermatology133(1)68-77(2013 Jan)
de la Garza G,Schleiffarth JR,Dunnwald M,Mankad A,Weirather JL,Bonde G,Butcher S,Mansour TA,Kousa YA,Fukazawa CF,Houston DW,Manak JR,Schutte BC,Wagner DS,Cornell RA

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capn9 cDNA ORF clone, Danio rerio(zebrafish)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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