utp4 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	utp4
Entrez Gene ID	406571
Full Name	UTP4, small subunit processome component
Synonyms	cirh1a,wu:fi09g10,wu:fi37c02,zgc:77199
General protein information	Preferred Names UTP4, small subunit processome component Names U3 small nucleolar RNA-associated protein 4 homolog cirrhosis, autosomal recessive 1A (cirhin)
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005169925.3	XP_005169982.1	U3 small nucleolar RNA-associated protein 4 homolog isoform X1
XM_005169925.2	XP_005169982.1	U3 small nucleolar RNA-associated protein 4 homolog isoform X1
NM_213282.1	NP_998447.1	U3 small nucleolar RNA-associated protein 4 homolog

Pathways from BioSystems

Homologies

Homo sapiens (human)	CIRH1A	NP_116219.2
Danio rerio (zebrafish)	cirh1a	NP_998447.1
Arabidopsis thaliana (thale cress)	AT4G07410	NP_567317.2
Oryza sativa (rice)	Os03g0735100	NP_001051185.2
Rattus norvegicus (Norway rat)	Cirh1a	NP_001009640.1
Kluyveromyces lactis	KLLA0D13222g	XP_453652.1
Macaca mulatta (Rhesus monkey)	CIRH1A	XP_001093408.2
Canis lupus familiaris (dog)	CIRH1A	XP_546858.3
Bos taurus (cattle)	CIRH1A	NP_001192601.1
Saccharomyces cerevisiae (baker's yeast)	UTP4	NP_010611.3
Schizosaccharomyces pombe (fission yeast)	utp4	NP_596540.1
Eremothecium gossypii	AGOS_AGR367C	NP_987033.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP006092	XP_316150.4
Arabidopsis thaliana (thale cress)	AT1G27470	NP_174067.2
Xenopus tropicalis (tropical clawed frog)	cirh1a	NP_001039163.1
Pan troglodytes (chimpanzee)	CIRH1A	XP_511062.3
Mus musculus (house mouse)	Cirh1a	NP_035704.2
Gallus gallus (chicken)	CIRH1A	XP_004944391.1
Drosophila melanogaster (fruit fly)	l(3)72Dn	NP_001261930.1

Gene Ontology
Bibliography

Related articles in PubMed

Transcriptome analysis reveals a ribosome constituents disorder involved in the RPL5 downregulated zebrafish model of Diamond-Blackfan anemia.
Wan Y, Zhang Q, Zhang Z, Song B, Wang X, Zhang Y, Jia Q, Cheng T, Zhu X, Leung AY, Yuan W, Jia H, Fang X
BMC medical genomics913(2016 Mar)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

p53-mediated biliary defects caused by knockdown of cirh1a, the zebrafish homolog of the gene responsible for North American Indian Childhood Cirrhosis.
Wilkins BJ, Lorent K, Matthews RP, Pack M
PloS one8(10)e77670(2013)

The zebrafish gene map defines ancestral vertebrate chromosomes.
Woods IG, Wilson C, Friedlander B, Chang P, Reyes DK, Nix R, Kelly PD, Chu F, Postlethwait JH, Talbot WS
Genome research15(9)1307-14(2005 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following utp4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the utp4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa37305	NM_213282.1 Latest version!	Danio rerio UTP4 small subunit processome component (utp4), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00
ODa23150	XM_005169925.3 Latest version!	Danio rerio cirrhosis, autosomal recessive 1A (cirhin) (cirh1a), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00
View Old Accession Versions >>
ODa23150	XM_005169925.2	Danio rerio cirrhosis, autosomal recessive 1A (cirhin) (cirh1a), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

utp4 ( NM_213282.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_998447.1 Danio rerio UTP4 small subunit processome component (utp4), mRNA.

Price & Availability↑

CloneID	ODa37305
Clone ID Related Accession (Same CDS sequence)	NM_213282.1
Accession Version	NM_213282.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2058bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556553600000
Organism	Danio rerio(zebrafish)
Product	U3 small nucleolar RNA-associated protein 4 homolog
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065322.1. ##Evidence-Data-START## Transcript exon combination :: BC065322.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGGGGAGT TTAAAGTACA CCGAGTTCGG TTCTTTGAAT ACGTGCCATC AGGAATTAGA 
GCTTTGGCTT TCAACCAGCA CAATGAAAGA ATGGCAGCTG CGAAGATGAA TGGGTCAGTG 
GAGATTTTCC ACTGTTCGGA CCGATTTTTC CAAGAGAAGA TCATCCCGGG CAGAGAGCAG 
GCTGGGATTG AAGGCCTTAC TTGGGTTGGG GAGCGTCTGT TTAGTGCAGG ACTGAATGGT 
GTGATAACAG AGTATGATCT TACAAACCAG AGGGTGAAAT ACACCATAGA TGCGTATGGA 
GGGCCAATCT GGGCCATAAC AGGCAATCAA CAAGGAACAC ACTTGGCGGT TGGTTGTGAA 
GATGGAACTG TGAAACTATT TGAGGTGACT GAAGACAAAA TACAGTTTGA GAGAAATCTG 
GACAGACAGA AAGGCCGGAT TATATCTCTA TCCTGGCACC CTTCAGGGTC CAAAATAGCA 
GCGGGAATGA TGGATATGAT CCAAGTTTTC AATGTGGAGA CAGGCCACTC TAAACATCGG 
ATATTGGTGG ACAGAGGGTA CGGGACGTCC CGCGGTAAGG AGTGTGTAGT GTGGAGTGTG 
GTCTACCTTT CAGATGGGAC CATCATCAGC GGAGACTCTG TGGGAATGGT GAAAATGTGG 
AGGGATGACA CTGGTACACT GATCAAAAGC CACAATATTA CAAAATCGGA TGTGCTTTCG 
TTATCAGTGT CTCAGAATGA GGACAGTATC GTGGCTGGGA CGTCAGAAGG ATTTGTGGTG 
CAGTTCCAGT TTCTTTCTAT GGTTTTGGAA AATAATGAGA AAGATTGGGT CAGAACCAGA 
ACATTCAGGA ACCACACACA TGATGTTCGA GCTGTGGCTG AGATCACAAC AGCTGTGGTT 
TCAGGAGGTA TGGACACACA GTTGGTTGTG AGACCTTTGT TAGACAAGCA TGAAGTGAAG 
TCATCAGCCT CTAAGCTGCG GAAGATTCAG TTTCCACATA GGAGTTTGGT GTCCTGTGCA 
AGGAAGGCAG GCACGTTACT GTTCCAGTAC CCTGGTCATT TGGAGCTCTG GAGACTTGGG 
GAGAGCGAAG GAGAAGGCAT ACCAGGAAGC AGTTTACTTC TAAAAAGAAA GCCAGAGAAG 
CTGCTTCATT TGAAAGTGAA GGGTGAGGAT CACATCCGCT GCAGTGCCGT GTCTCCCTGT 
GGTGAATGGA TTGCGTACTC GACCACCAGC AGTTTACGCC TCTACAAGCT ACACTGCGAC 
AGTAACAACG TCAGCATCAC CAAGATATCC AAACTTCCAA AGGTACTGGG CTCAGCCAGT 
CAGCTCTGCT TCTCTTCAGA CTCCACCCAT TTGTTTTCTG CCTCCACACA ATCATCAGTG 
CACATGGTCT CTCTCAGCCA ACCAGAGTGC AAGTTTGTGG CCACCTTTAA AACCAAGTCA 
GGTTCCCATC AGGCAATCCA CTTACTTGCA GCAAGCGAGG ATGGCAAATG GTTGGCATCT 
GCAAACATTG ACAACGAGGT TCACATCTAC AACCTGCAGA CACGGAAGGC TCATTGCACA 
GTTCCTATAT ACAGTTCAGC TGTCAGTGCC ATGGCCATCC ATCCAACAAC AAACTGTCTG 
TTCATGGTTC ATGCAGATCA ACAGATTTTT GAGTTTTCCA TCGAGCAGAA AGAATACACG 
GATTGGAGCA GATTGGTACA GAGGCAGGGC CTTCATAGGA TTTGGCTGGA AAGAGACACA 
CCTTGTCTTA ACGTGACGTT TAATCAGAAG AATCCTTCTC ACGTCATCCT GCATGATATG 
TACATGTTCT GCATCATTGA CCAAAGCCAG CCACTGCCTG ATAGTAAAAG TCAGTTCTTG 
AATCAGCTTA CACTGAGGAG CCTCCCTGAG GAACAGAGGA AATCTTACAG CCATGCTTTT 
AAAGTCTGCA AGACATTCAA GGAGCTCTTG TGTGTTGATG TGATGGGCGA TCAGTCTCTG 
GTGGTGGTTG AACGGCCTCT CGAGGACATT ACCGCTCAGT TGCCTGCGCC CATCAAACAA 
AAGAAATTTG CCACATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_998447.1
CDS	59..2116
Translation	MGEFKVHRVRFFEYVPSGIRALAFNQHNERMAAAKMNGSVEIFHCSDRFFQEKIIPGREQAGIEGLTWVGERLFSAGLNGVITEYDLTNQRVKYTIDAYGGPIWAITGNQQGTHLAVGCEDGTVKLFEVTEDKIQFERNLDRQKGRIISLSWHPSGSKIAAGMMDMIQVFNVETGHSKHRILVDRGYGTSRGKECVVWSVVYLSDGTIISGDSVGMVKMWRDDTGTLIKSHNITKSDVLSLSVSQNEDSIVAGTSEGFVVQFQFLSMVLENNEKDWVRTRTFRNHTHDVRAVAEITTAVVSGGMDTQLVVRPLLDKHEVKSSASKLRKIQFPHRSLVSCARKAGTLLFQYPGHLELWRLGESEGEGIPGSSLLLKRKPEKLLHLKVKGEDHIRCSAVSPCGEWIAYSTTSSLRLYKLHCDSNNVSITKISKLPKVLGSASQLCFSSDSTHLFSASTQSSVHMVSLSQPECKFVATFKTKSGSHQAIHLLAASEDGKWLASANIDNEVHIYNLQTRKAHCTVPIYSSAVSAMAIHPTTNCLFMVHADQQIFEFSIEQKEYTDWSRLVQRQGLHRIWLERDTPCLNVTFNQKNPSHVILHDMYMFCIIDQSQPLPDSKSQFLNQLTLRSLPEEQRKSYSHAFKVCKTFKELLCVDVMGDQSLVVVERPLEDITAQLPAPIKQKKFAT

Target ORF information:

RefSeq Version	NM_213282.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio UTP4 small subunit processome component (utp4), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_213282.1

ORF Insert Sequence:

ATGGGGGAGT TTAAAGTACA CCGAGTTCGG TTCTTTGAAT ACGTGCCATC AGGAATTAGA 
GCTTTGGCTT TCAACCAGCA CAATGAAAGA ATGGCAGCTG CGAAGATGAA TGGGTCAGTG 
GAGATTTTCC ACTGTTCGGA CCGATTTTTC CAAGAGAAGA TCATCCCGGG CAGAGAGCAG 
GCTGGGATTG AAGGCCTTAC TTGGGTTGGG GAGCGTCTGT TTAGTGCAGG ACTGAATGGT 
GTGATAACAG AGTATGATCT TACAAACCAG AGGGTGAAAT ACACCATAGA TGCGTATGGA 
GGGCCAATCT GGGCCATAAC AGGCAATCAA CAAGGAACAC ACTTGGCGGT TGGTTGTGAA 
GATGGAACTG TGAAACTATT TGAGGTGACT GAAGACAAAA TACAGTTTGA GAGAAATCTG 
GACAGACAGA AAGGCCGGAT TATATCTCTA TCCTGGCACC CTTCAGGGTC CAAAATAGCA 
GCGGGAATGA TGGATATGAT CCAAGTTTTC AATGTGGAGA CAGGCCACTC TAAACATCGG 
ATATTGGTGG ACAGAGGGTA CGGGACGTCC CGCGGTAAGG AGTGTGTAGT GTGGAGTGTG 
GTCTACCTTT CAGATGGGAC CATCATCAGC GGAGACTCTG TGGGAATGGT GAAAATGTGG 
AGGGATGACA CTGGTACACT GATCAAAAGC CACAATATTA CAAAATCGGA TGTGCTTTCG 
TTATCAGTGT CTCAGAATGA GGACAGTATC GTGGCTGGGA CGTCAGAAGG ATTTGTGGTG 
CAGTTCCAGT TTCTTTCTAT GGTTTTGGAA AATAATGAGA AAGATTGGGT CAGAACCAGA 
ACATTCAGGA ACCACACACA TGATGTTCGA GCTGTGGCTG AGATCACAAC AGCTGTGGTT 
TCAGGAGGTA TGGACACACA GTTGGTTGTG AGACCTTTGT TAGACAAGCA TGAAGTGAAG 
TCATCAGCCT CTAAGCTGCG GAAGATTCAG TTTCCACATA GGAGTTTGGT GTCCTGTGCA 
AGGAAGGCAG GCACGTTACT GTTCCAGTAC CCTGGTCATT TGGAGCTCTG GAGACTTGGG 
GAGAGCGAAG GAGAAGGCAT ACCAGGAAGC AGTTTACTTC TAAAAAGAAA GCCAGAGAAG 
CTGCTTCATT TGAAAGTGAA GGGTGAGGAT CACATCCGCT GCAGTGCCGT GTCTCCCTGT 
GGTGAATGGA TTGCGTACTC GACCACCAGC AGTTTACGCC TCTACAAGCT ACACTGCGAC 
AGTAACAACG TCAGCATCAC CAAGATATCC AAACTTCCAA AGGTACTGGG CTCAGCCAGT 
CAGCTCTGCT TCTCTTCAGA CTCCACCCAT TTGTTTTCTG CCTCCACACA ATCATCAGTG 
CACATGGTCT CTCTCAGCCA ACCAGAGTGC AAGTTTGTGG CCACCTTTAA AACCAAGTCA 
GGTTCCCATC AGGCAATCCA CTTACTTGCA GCAAGCGAGG ATGGCAAATG GTTGGCATCT 
GCAAACATTG ACAACGAGGT TCACATCTAC AACCTGCAGA CACGGAAGGC TCATTGCACA 
GTTCCTATAT ACAGTTCAGC TGTCAGTGCC ATGGCCATCC ATCCAACAAC AAACTGTCTG 
TTCATGGTTC ATGCAGATCA ACAGATTTTT GAGTTTTCCA TCGAGCAGAA AGAATACACG 
GATTGGAGCA GATTGGTACA GAGGCAGGGC CTTCATAGGA TTTGGCTGGA AAGAGACACA 
CCTTGTCTTA ACGTGACGTT TAATCAGAAG AATCCTTCTC ACGTCATCCT GCATGATATG 
TACATGTTCT GCATCATTGA CCAAAGCCAG CCACTGCCTG ATAGTAAAAG TCAGTTCTTG 
AATCAGCTTA CACTGAGGAG CCTCCCTGAG GAACAGAGGA AATCTTACAG CCATGCTTTT 
AAAGTCTGCA AGACATTCAA GGAGCTCTTG TGTGTTGATG TGATGGGCGA TCAGTCTCTG 
GTGGTGGTTG AACGGCCTCT CGAGGACATT ACCGCTCAGT TGCCTGCGCC CATCAAACAA 
AAGAAATTTG CCACATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

utp4 ( XM_005169925.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005169982.1 Danio rerio cirrhosis, autosomal recessive 1A (cirhin) (cirh1a), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa23150
Clone ID Related Accession (Same CDS sequence)	XM_005169925.3 , XM_005169925.2
Accession Version	XM_005169925.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2112bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	U3 small nucleolar RNA-associated protein 4 homolog isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005169925.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGTAAAAC ATCCGAAAGA GAGAGAGAGA AAACATACAA AACGAGGGTC AGCGATGGGG 
GAGTTTAAAG TACACCGAGT TCGGTTCTTT GAATACGTGC CATCAGGAAT TAGAGCTTTG 
GCTTTCAACC AGCACAATGA AAGAATGGCA GCTGCGAAGA TGAATGGGTC AGTGGAGATT 
TTCCACTGTT CGGACCGATT TTTCCAAGAG AAGATCATCC CGGGCAGAGA GCAGGCTGGG 
ATTGAAGGCC TTACCTGGGT TGGGGAGCGT CTGTTTAGTG CAGGACTGAA TGGTGTGATA 
ACAGAGTATG ATCTTACAAA CCAGAGGGTG AAATACACCA TAGATGCGTA TGGAGGGCCA 
ATCTGGGCCA TAACAGGCAA TCAACAAGGA ACACACTTGG CGGTTGGTTG TGAAGATGGA 
ACTGTGAAAC TATTTGAGGT GACTGAAGAC AAAATACAGT TTGAGAGAAA TCTGGACAGA 
CAGAAAGGCC GGATTATATC TCTATCCTGG CACCCTTCAG GGTCCAAAAT AGCAGCGGGA 
ATGATGGATA TGATCCAAGT TTTCAATGTG GAGACAGGCC ACTCTAAACA TCGGATATTG 
GTGGACAGAG GGTACGGGAC GTCCCGCGGT AAGGAGTGTG TAGTGTGGAG TGTGGTCTAC 
CTTTCAGATG GGACCATCAT CAGCGGAGAC TCTGTGGGAA TGGTGAAAAT GTGGAGGGAT 
GACACTGGTA CACTGATCAA AAGCCACAAT ATTACAAAAT CGGATGTGCT TTCGTTATCA 
GTGTCTCAGA ATGAGGACAG TATCGTGGCT GGGACGTCAG AAGGATTTGT GGTGCAGTTC 
CAGTTTCTTT CTATGGTTTT GGAAAATAAT GAGAAAGATT GGGTCAGAAC CAGAACATTC 
AGGAACCACA CACATGATGT TCGAGCTGTG GCTGAGATCA CAACAGCTGT GGTTTCAGGA 
GGTATGGACA CACAGTTGGT TGTGAGACCT TTGTTAGACA AGCATGAAGT GAAGTCATCA 
GCCTCTAAGC TGCGGAAGAT TCAGTTTCCA CATAGGAGTT TGGTGTCCTG TGCAAGGAAG 
GCAGGCACGT TACTGTTCCA GTACCCTGGT CATTTGGAGC TCTGGAGACT TGGGGAGAGC 
GAAGGAGAAG GCATACCAGG AAGCAGTTTA CTTCTAAAAA GAAAGCCAGA GAAGCTGCTT 
CATTTGAAAG TGAAGGGTGA GGATCACATC CGCTGCAGTG CCGTGTCTCC CTGTGGTGAA 
TGGATTGCGT ACTCGACCAC CAGCAGTTTA CGCCTCTACA AGCTACACTG CGACAGTAAC 
AACGTCAGCA TCACCAAGAT ATCCAAACTT CCAAAGGTAC TGGGCTCAGC CAGTCAGCTC 
TGCTTCTCTT CAGACTCCAC CCATTTGTTT TCTGCCTCCA CACAATCATC AGTGCACATG 
GTCTCTCTCA GCCAACCAGA GTGCAAGTTT GTGGCCACCT TTAAAACCAA GTCAGGTTCC 
CATCAGGCAA TCCACTTACT TGCAGCAAGC GAGGATGGCA AATGGTTGGC ATCTGCAAAC 
ATTGACAACG AGGTTCACAT CTACAACCTG CAGACACGGA AGGCTCATTG CACAGTTCCT 
ATATACAGTT CAGCTGTCAG TGCCATGGCC ATCCATCCAA CAACAAACTG TCTGTTCATG 
GTTCATGCAG ATCAACAGAT TTTTGAGTTT TCCATCGAGC AGAAAGAATA CACGGATTGG 
AGCAGATTGG TACAGAGGCA GGGCCTTCAT AGGATTTGGC TGGAAAGAGA CACACCTTGT 
CTTAACGTGA CGTTTAATCA GAAGAATCCT TCTCACGTCA TCCTGCATGA TATGTACATG 
TTCTGCATCA TTGACCAAAG CCAGCCACTG CCTGATAGTA AAAGTCAGTT CTTGAATCAG 
CTTACACTGA GGAGCCTCCC TGAGGAACAG AGGAAATCTT ACAGCCATGC TTTTAAAGTC 
TGCAAGACAT TCAAGGAGCT CTTGTGTGTT GATGTGATGG GCGATCAGTC TCTGGTGGTG 
GTTGAACGGC CTCTCGAGGA CATTACCGCT CAGTTGCCTG CGCCCATCAA ACAAAAGAAA 
TTTGCCACAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005169982.1
CDS	76..2187
Translation	MVKHPKERERKHTKRGSAMGEFKVHRVRFFEYVPSGIRALAFNQHNERMAAAKMNGSVEIFHCSDRFFQEKIIPGREQAGIEGLTWVGERLFSAGLNGVITEYDLTNQRVKYTIDAYGGPIWAITGNQQGTHLAVGCEDGTVKLFEVTEDKIQFERNLDRQKGRIISLSWHPSGSKIAAGMMDMIQVFNVETGHSKHRILVDRGYGTSRGKECVVWSVVYLSDGTIISGDSVGMVKMWRDDTGTLIKSHNITKSDVLSLSVSQNEDSIVAGTSEGFVVQFQFLSMVLENNEKDWVRTRTFRNHTHDVRAVAEITTAVVSGGMDTQLVVRPLLDKHEVKSSASKLRKIQFPHRSLVSCARKAGTLLFQYPGHLELWRLGESEGEGIPGSSLLLKRKPEKLLHLKVKGEDHIRCSAVSPCGEWIAYSTTSSLRLYKLHCDSNNVSITKISKLPKVLGSASQLCFSSDSTHLFSASTQSSVHMVSLSQPECKFVATFKTKSGSHQAIHLLAASEDGKWLASANIDNEVHIYNLQTRKAHCTVPIYSSAVSAMAIHPTTNCLFMVHADQQIFEFSIEQKEYTDWSRLVQRQGLHRIWLERDTPCLNVTFNQKNPSHVILHDMYMFCIIDQSQPLPDSKSQFLNQLTLRSLPEEQRKSYSHAFKVCKTFKELLCVDVMGDQSLVVVERPLEDITAQLPAPIKQKKFAT

Target ORF information:

RefSeq Version	XM_005169925.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio cirrhosis, autosomal recessive 1A (cirhin) (cirh1a), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005169925.3

ORF Insert Sequence:

ATGGTAAAAC ATCCGAAAGA GAGAGAGAGA AAACATACAA AACGAGGGTC AGCGATGGGG 
GAGTTTAAAG TACACCGAGT TCGGTTCTTT GAATACGTGC CATCAGGAAT TAGAGCTTTG 
GCTTTCAACC AGCACAATGA AAGAATGGCA GCTGCGAAGA TGAATGGGTC AGTGGAGATT 
TTCCACTGTT CGGACCGATT TTTCCAAGAG AAGATCATCC CGGGCAGAGA GCAGGCTGGG 
ATTGAAGGCC TTACCTGGGT TGGGGAGCGT CTGTTTAGTG CAGGACTGAA TGGTGTGATA 
ACAGAGTATG ATCTTACAAA CCAGAGGGTG AAATACACCA TAGATGCGTA TGGAGGGCCA 
ATCTGGGCCA TAACAGGCAA TCAACAAGGA ACACACTTGG CGGTTGGTTG TGAAGATGGA 
ACTGTGAAAC TATTTGAGGT GACTGAAGAC AAAATACAGT TTGAGAGAAA TCTGGACAGA 
CAGAAAGGCC GGATTATATC TCTATCCTGG CACCCTTCAG GGTCCAAAAT AGCAGCGGGA 
ATGATGGATA TGATCCAAGT TTTCAATGTG GAGACAGGCC ACTCTAAACA TCGGATATTG 
GTGGACAGAG GGTACGGGAC GTCCCGCGGT AAGGAGTGTG TAGTGTGGAG TGTGGTCTAC 
CTTTCAGATG GGACCATCAT CAGCGGAGAC TCTGTGGGAA TGGTGAAAAT GTGGAGGGAT 
GACACTGGTA CACTGATCAA AAGCCACAAT ATTACAAAAT CGGATGTGCT TTCGTTATCA 
GTGTCTCAGA ATGAGGACAG TATCGTGGCT GGGACGTCAG AAGGATTTGT GGTGCAGTTC 
CAGTTTCTTT CTATGGTTTT GGAAAATAAT GAGAAAGATT GGGTCAGAAC CAGAACATTC 
AGGAACCACA CACATGATGT TCGAGCTGTG GCTGAGATCA CAACAGCTGT GGTTTCAGGA 
GGTATGGACA CACAGTTGGT TGTGAGACCT TTGTTAGACA AGCATGAAGT GAAGTCATCA 
GCCTCTAAGC TGCGGAAGAT TCAGTTTCCA CATAGGAGTT TGGTGTCCTG TGCAAGGAAG 
GCAGGCACGT TACTGTTCCA GTACCCTGGT CATTTGGAGC TCTGGAGACT TGGGGAGAGC 
GAAGGAGAAG GCATACCAGG AAGCAGTTTA CTTCTAAAAA GAAAGCCAGA GAAGCTGCTT 
CATTTGAAAG TGAAGGGTGA GGATCACATC CGCTGCAGTG CCGTGTCTCC CTGTGGTGAA 
TGGATTGCGT ACTCGACCAC CAGCAGTTTA CGCCTCTACA AGCTACACTG CGACAGTAAC 
AACGTCAGCA TCACCAAGAT ATCCAAACTT CCAAAGGTAC TGGGCTCAGC CAGTCAGCTC 
TGCTTCTCTT CAGACTCCAC CCATTTGTTT TCTGCCTCCA CACAATCATC AGTGCACATG 
GTCTCTCTCA GCCAACCAGA GTGCAAGTTT GTGGCCACCT TTAAAACCAA GTCAGGTTCC 
CATCAGGCAA TCCACTTACT TGCAGCAAGC GAGGATGGCA AATGGTTGGC ATCTGCAAAC 
ATTGACAACG AGGTTCACAT CTACAACCTG CAGACACGGA AGGCTCATTG CACAGTTCCT 
ATATACAGTT CAGCTGTCAG TGCCATGGCC ATCCATCCAA CAACAAACTG TCTGTTCATG 
GTTCATGCAG ATCAACAGAT TTTTGAGTTT TCCATCGAGC AGAAAGAATA CACGGATTGG 
AGCAGATTGG TACAGAGGCA GGGCCTTCAT AGGATTTGGC TGGAAAGAGA CACACCTTGT 
CTTAACGTGA CGTTTAATCA GAAGAATCCT TCTCACGTCA TCCTGCATGA TATGTACATG 
TTCTGCATCA TTGACCAAAG CCAGCCACTG CCTGATAGTA AAAGTCAGTT CTTGAATCAG 
CTTACACTGA GGAGCCTCCC TGAGGAACAG AGGAAATCTT ACAGCCATGC TTTTAAAGTC 
TGCAAGACAT TCAAGGAGCT CTTGTGTGTT GATGTGATGG GCGATCAGTC TCTGGTGGTG 
GTTGAACGGC CTCTCGAGGA CATTACCGCT CAGTTGCCTG CGCCCATCAA ACAAAAGAAA 
TTTGCCACAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

utp4 ( XM_005169925.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005169982.1 Danio rerio cirrhosis, autosomal recessive 1A (cirhin) (cirh1a), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa23150
Clone ID Related Accession (Same CDS sequence)	XM_005169925.3 , XM_005169925.2
Accession Version	XM_005169925.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2112bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	U3 small nucleolar RNA-associated protein 4 homolog isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005169925.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGTAAAAC ATCCGAAAGA GAGAGAGAGA AAACATACAA AACGAGGGTC AGCGATGGGG 
GAGTTTAAAG TACACCGAGT TCGGTTCTTT GAATACGTGC CATCAGGAAT TAGAGCTTTG 
GCTTTCAACC AGCACAATGA AAGAATGGCA GCTGCGAAGA TGAATGGGTC AGTGGAGATT 
TTCCACTGTT CGGACCGATT TTTCCAAGAG AAGATCATCC CGGGCAGAGA GCAGGCTGGG 
ATTGAAGGCC TTACCTGGGT TGGGGAGCGT CTGTTTAGTG CAGGACTGAA TGGTGTGATA 
ACAGAGTATG ATCTTACAAA CCAGAGGGTG AAATACACCA TAGATGCGTA TGGAGGGCCA 
ATCTGGGCCA TAACAGGCAA TCAACAAGGA ACACACTTGG CGGTTGGTTG TGAAGATGGA 
ACTGTGAAAC TATTTGAGGT GACTGAAGAC AAAATACAGT TTGAGAGAAA TCTGGACAGA 
CAGAAAGGCC GGATTATATC TCTATCCTGG CACCCTTCAG GGTCCAAAAT AGCAGCGGGA 
ATGATGGATA TGATCCAAGT TTTCAATGTG GAGACAGGCC ACTCTAAACA TCGGATATTG 
GTGGACAGAG GGTACGGGAC GTCCCGCGGT AAGGAGTGTG TAGTGTGGAG TGTGGTCTAC 
CTTTCAGATG GGACCATCAT CAGCGGAGAC TCTGTGGGAA TGGTGAAAAT GTGGAGGGAT 
GACACTGGTA CACTGATCAA AAGCCACAAT ATTACAAAAT CGGATGTGCT TTCGTTATCA 
GTGTCTCAGA ATGAGGACAG TATCGTGGCT GGGACGTCAG AAGGATTTGT GGTGCAGTTC 
CAGTTTCTTT CTATGGTTTT GGAAAATAAT GAGAAAGATT GGGTCAGAAC CAGAACATTC 
AGGAACCACA CACATGATGT TCGAGCTGTG GCTGAGATCA CAACAGCTGT GGTTTCAGGA 
GGTATGGACA CACAGTTGGT TGTGAGACCT TTGTTAGACA AGCATGAAGT GAAGTCATCA 
GCCTCTAAGC TGCGGAAGAT TCAGTTTCCA CATAGGAGTT TGGTGTCCTG TGCAAGGAAG 
GCAGGCACGT TACTGTTCCA GTACCCTGGT CATTTGGAGC TCTGGAGACT TGGGGAGAGC 
GAAGGAGAAG GCATACCAGG AAGCAGTTTA CTTCTAAAAA GAAAGCCAGA GAAGCTGCTT 
CATTTGAAAG TGAAGGGTGA GGATCACATC CGCTGCAGTG CCGTGTCTCC CTGTGGTGAA 
TGGATTGCGT ACTCGACCAC CAGCAGTTTA CGCCTCTACA AGCTACACTG CGACAGTAAC 
AACGTCAGCA TCACCAAGAT ATCCAAACTT CCAAAGGTAC TGGGCTCAGC CAGTCAGCTC 
TGCTTCTCTT CAGACTCCAC CCATTTGTTT TCTGCCTCCA CACAATCATC AGTGCACATG 
GTCTCTCTCA GCCAACCAGA GTGCAAGTTT GTGGCCACCT TTAAAACCAA GTCAGGTTCC 
CATCAGGCAA TCCACTTACT TGCAGCAAGC GAGGATGGCA AATGGTTGGC ATCTGCAAAC 
ATTGACAACG AGGTTCACAT CTACAACCTG CAGACACGGA AGGCTCATTG CACAGTTCCT 
ATATACAGTT CAGCTGTCAG TGCCATGGCC ATCCATCCAA CAACAAACTG TCTGTTCATG 
GTTCATGCAG ATCAACAGAT TTTTGAGTTT TCCATCGAGC AGAAAGAATA CACGGATTGG 
AGCAGATTGG TACAGAGGCA GGGCCTTCAT AGGATTTGGC TGGAAAGAGA CACACCTTGT 
CTTAACGTGA CGTTTAATCA GAAGAATCCT TCTCACGTCA TCCTGCATGA TATGTACATG 
TTCTGCATCA TTGACCAAAG CCAGCCACTG CCTGATAGTA AAAGTCAGTT CTTGAATCAG 
CTTACACTGA GGAGCCTCCC TGAGGAACAG AGGAAATCTT ACAGCCATGC TTTTAAAGTC 
TGCAAGACAT TCAAGGAGCT CTTGTGTGTT GATGTGATGG GCGATCAGTC TCTGGTGGTG 
GTTGAACGGC CTCTCGAGGA CATTACCGCT CAGTTGCCTG CGCCCATCAA ACAAAAGAAA 
TTTGCCACAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005169982.1
CDS	58..2169
Translation	MVKHPKERERKHTKRGSAMGEFKVHRVRFFEYVPSGIRALAFNQHNERMAAAKMNGSVEIFHCSDRFFQEKIIPGREQAGIEGLTWVGERLFSAGLNGVITEYDLTNQRVKYTIDAYGGPIWAITGNQQGTHLAVGCEDGTVKLFEVTEDKIQFERNLDRQKGRIISLSWHPSGSKIAAGMMDMIQVFNVETGHSKHRILVDRGYGTSRGKECVVWSVVYLSDGTIISGDSVGMVKMWRDDTGTLIKSHNITKSDVLSLSVSQNEDSIVAGTSEGFVVQFQFLSMVLENNEKDWVRTRTFRNHTHDVRAVAEITTAVVSGGMDTQLVVRPLLDKHEVKSSASKLRKIQFPHRSLVSCARKAGTLLFQYPGHLELWRLGESEGEGIPGSSLLLKRKPEKLLHLKVKGEDHIRCSAVSPCGEWIAYSTTSSLRLYKLHCDSNNVSITKISKLPKVLGSASQLCFSSDSTHLFSASTQSSVHMVSLSQPECKFVATFKTKSGSHQAIHLLAASEDGKWLASANIDNEVHIYNLQTRKAHCTVPIYSSAVSAMAIHPTTNCLFMVHADQQIFEFSIEQKEYTDWSRLVQRQGLHRIWLERDTPCLNVTFNQKNPSHVILHDMYMFCIIDQSQPLPDSKSQFLNQLTLRSLPEEQRKSYSHAFKVCKTFKELLCVDVMGDQSLVVVERPLEDITAQLPAPIKQKKFAT

Target ORF information:

RefSeq Version	XM_005169925.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio cirrhosis, autosomal recessive 1A (cirhin) (cirh1a), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005169925.2

ORF Insert Sequence:

ATGGTAAAAC ATCCGAAAGA GAGAGAGAGA AAACATACAA AACGAGGGTC AGCGATGGGG 
GAGTTTAAAG TACACCGAGT TCGGTTCTTT GAATACGTGC CATCAGGAAT TAGAGCTTTG 
GCTTTCAACC AGCACAATGA AAGAATGGCA GCTGCGAAGA TGAATGGGTC AGTGGAGATT 
TTCCACTGTT CGGACCGATT TTTCCAAGAG AAGATCATCC CGGGCAGAGA GCAGGCTGGG 
ATTGAAGGCC TTACCTGGGT TGGGGAGCGT CTGTTTAGTG CAGGACTGAA TGGTGTGATA 
ACAGAGTATG ATCTTACAAA CCAGAGGGTG AAATACACCA TAGATGCGTA TGGAGGGCCA 
ATCTGGGCCA TAACAGGCAA TCAACAAGGA ACACACTTGG CGGTTGGTTG TGAAGATGGA 
ACTGTGAAAC TATTTGAGGT GACTGAAGAC AAAATACAGT TTGAGAGAAA TCTGGACAGA 
CAGAAAGGCC GGATTATATC TCTATCCTGG CACCCTTCAG GGTCCAAAAT AGCAGCGGGA 
ATGATGGATA TGATCCAAGT TTTCAATGTG GAGACAGGCC ACTCTAAACA TCGGATATTG 
GTGGACAGAG GGTACGGGAC GTCCCGCGGT AAGGAGTGTG TAGTGTGGAG TGTGGTCTAC 
CTTTCAGATG GGACCATCAT CAGCGGAGAC TCTGTGGGAA TGGTGAAAAT GTGGAGGGAT 
GACACTGGTA CACTGATCAA AAGCCACAAT ATTACAAAAT CGGATGTGCT TTCGTTATCA 
GTGTCTCAGA ATGAGGACAG TATCGTGGCT GGGACGTCAG AAGGATTTGT GGTGCAGTTC 
CAGTTTCTTT CTATGGTTTT GGAAAATAAT GAGAAAGATT GGGTCAGAAC CAGAACATTC 
AGGAACCACA CACATGATGT TCGAGCTGTG GCTGAGATCA CAACAGCTGT GGTTTCAGGA 
GGTATGGACA CACAGTTGGT TGTGAGACCT TTGTTAGACA AGCATGAAGT GAAGTCATCA 
GCCTCTAAGC TGCGGAAGAT TCAGTTTCCA CATAGGAGTT TGGTGTCCTG TGCAAGGAAG 
GCAGGCACGT TACTGTTCCA GTACCCTGGT CATTTGGAGC TCTGGAGACT TGGGGAGAGC 
GAAGGAGAAG GCATACCAGG AAGCAGTTTA CTTCTAAAAA GAAAGCCAGA GAAGCTGCTT 
CATTTGAAAG TGAAGGGTGA GGATCACATC CGCTGCAGTG CCGTGTCTCC CTGTGGTGAA 
TGGATTGCGT ACTCGACCAC CAGCAGTTTA CGCCTCTACA AGCTACACTG CGACAGTAAC 
AACGTCAGCA TCACCAAGAT ATCCAAACTT CCAAAGGTAC TGGGCTCAGC CAGTCAGCTC 
TGCTTCTCTT CAGACTCCAC CCATTTGTTT TCTGCCTCCA CACAATCATC AGTGCACATG 
GTCTCTCTCA GCCAACCAGA GTGCAAGTTT GTGGCCACCT TTAAAACCAA GTCAGGTTCC 
CATCAGGCAA TCCACTTACT TGCAGCAAGC GAGGATGGCA AATGGTTGGC ATCTGCAAAC 
ATTGACAACG AGGTTCACAT CTACAACCTG CAGACACGGA AGGCTCATTG CACAGTTCCT 
ATATACAGTT CAGCTGTCAG TGCCATGGCC ATCCATCCAA CAACAAACTG TCTGTTCATG 
GTTCATGCAG ATCAACAGAT TTTTGAGTTT TCCATCGAGC AGAAAGAATA CACGGATTGG 
AGCAGATTGG TACAGAGGCA GGGCCTTCAT AGGATTTGGC TGGAAAGAGA CACACCTTGT 
CTTAACGTGA CGTTTAATCA GAAGAATCCT TCTCACGTCA TCCTGCATGA TATGTACATG 
TTCTGCATCA TTGACCAAAG CCAGCCACTG CCTGATAGTA AAAGTCAGTT CTTGAATCAG 
CTTACACTGA GGAGCCTCCC TGAGGAACAG AGGAAATCTT ACAGCCATGC TTTTAAAGTC 
TGCAAGACAT TCAAGGAGCT CTTGTGTGTT GATGTGATGG GCGATCAGTC TCTGGTGGTG 
GTTGAACGGC CTCTCGAGGA CATTACCGCT CAGTTGCCTG CGCCCATCAA ACAAAAGAAA 
TTTGCCACAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Transcriptome analysis reveals a ribosome constituents disorder involved in the RPL5 downregulated zebrafish model of Diamond-Blackfan anemia.
BMC medical genomics913(2016 Mar)
Wan Y,Zhang Q,Zhang Z,Song B,Wang X,Zhang Y,Jia Q,Cheng T,Zhu X,Leung AY,Yuan W,Jia H,Fang X

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

p53-mediated biliary defects caused by knockdown of cirh1a, the zebrafish homolog of the gene responsible for North American Indian Childhood Cirrhosis.
PloS one8(10)e77670(2013)
Wilkins BJ,Lorent K,Matthews RP,Pack M

The zebrafish gene map defines ancestral vertebrate chromosomes.
Genome research15(9)1307-14(2005 Sep)
Woods IG,Wilson C,Friedlander B,Chang P,Reyes DK,Nix R,Kelly PD,Chu F,Postlethwait JH,Talbot WS

REQUEST A QUOTE

EMAIL

gene@genscript.com

PHONE

1-877-436-7274

ONLINE FORM

Online Quote Submission

ONLINE FORM

Online Quote Submission

utp4 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Most Popular Services

Services & Products

News & Blogs

REQUEST A QUOTE

EMAIL

PHONE

ONLINE FORM

ONLINE FORM