cdab cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	cdab
Entrez Gene ID	402979
Full Name	cytidine deaminase b
Synonyms	cda,zgc:77948
General protein information	Preferred Names cytidine deaminase b Names cytidine deaminase
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_205679.1	NP_991242.1	cytidine deaminase

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	CDA	XP_001161389.1
Danio rerio (zebrafish)	LOC559958	XP_001923622.2
Schizosaccharomyces pombe (fission yeast)	cdd1	NP_594321.1
Rattus norvegicus (Norway rat)	LOC100909857	XP_003750114.1
Macaca mulatta (Rhesus monkey)	CDA	XP_001096632.1
Canis lupus familiaris (dog)	CDA	XP_544519.1
Rattus norvegicus (Norway rat)	Cda	NP_001102158.1
Gallus gallus (chicken)	CDA	NP_001139516.1
Saccharomyces cerevisiae (baker's yeast)	CDD1	NP_013346.1
Neurospora crassa	NCU08359	XP_965262.1
Bos taurus (cattle)	CDA	NP_001180039.1
Eremothecium gossypii	AGOS_AGL123W	NP_986544.1
Mus musculus (house mouse)	Cda	NP_082452.1
Xenopus tropicalis (tropical clawed frog)	cda	NP_001017217.1
Kluyveromyces lactis	KLLA0D18414g	XP_453876.1
Magnaporthe oryzae (rice blast fungus)	MGG_14549	XP_003710043.1
Homo sapiens (human)	CDA	NP_001776.1
Danio rerio (zebrafish)	cda	NP_991242.1

Gene Ontology
Bibliography

Related articles in PubMed

Metabolism disruption analysis of zebrafish larvae in response to BPA and BPA analogs based on RNA-Seq technique.
Qiu W, Liu S, Yang F, Dong P, Yang M, Wong M, Zheng C
Ecotoxicology and environmental safety174181-188(2019 Jun)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Fmrp Interacts with Adar and Regulates RNA Editing, Synaptic Density and Locomotor Activity in Zebrafish.
Shamay-Ramot A, Khermesh K, Porath HT, Barak M, Pinto Y, Wachtel C, Zilberberg A, Lerer-Goldshtein T, Efroni S, Levanon EY, Appelbaum L
PLoS genetics11(12)e1005702(2015 Dec)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Many genes in fish have species-specific asymmetric rates of molecular evolution.
Steinke D, Salzburger W, Braasch I, Meyer A
BMC genomics720(2006 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cdab gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cdab cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa32160	NM_205679.1 Latest version!	Danio rerio cytidine deaminase b (cdab), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cdab ( NM_205679.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_991242.1 Danio rerio cytidine deaminase b (cdab), mRNA.

Price & Availability↑

CloneID	ODa32160
Clone ID Related Accession (Same CDS sequence)	NM_205679.1
Accession Version	NM_205679.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 480bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1576771200000
Organism	Danio rerio(zebrafish)
Product	cytidine deaminase
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065476.1. ##Evidence-Data-START## Transcript exon combination :: BC065476.1, EH508778.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA3505370 [ECO:0000348] ##Evidence-Data-END##

ATGGAAGACC AAAAGATGAT GCATGAGCTT ATTAATGGGT TGAATGGGCA CTTGTTGGGA 
ATAAAAGAGT TGACTCGAAA ATCTCAAGAG GCTAAGAAGT TTGCCTATTG CCCATACAGC 
AAGTTTCGAG TCGGGGCAGC ACTGCTGACA CATGACGGGA CGGTTTTCAC AGGGTGTAAC 
GTGGAAAACG CATGCTTCAA CCTGGGAATC TGTGCTGAGA GAGTTGCCAT TTCCAAAGCT 
GTATCTGAGG GCTACAGGGA TTTCAAAGCC ATTGCTATTG CGAGTGATAT GTGTGAGAAC 
TTTATTTCCC CCTGTGGAGG ATGCCGGCAG TTCATGAGAG AGTTTGGTTC TAACTGGGAA 
GTGTATTTGT CCAAACCTGA CGGTTCCTAT GTTGAGATGA CGGTTGAGGA ACTTCTGCCT 
GCATCTTTCG GACCAGAGGA CTTAAAAATG AAGAAAGCGA ACATTCGGAA TGAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_991242.1
CDS	19..498
Translation	MEDQKMMHELINGLNGHLLGIKELTRKSQEAKKFAYCPYSKFRVGAALLTHDGTVFTGCNVENACFNLGICAERVAISKAVSEGYRDFKAIAIASDMCENFISPCGGCRQFMREFGSNWEVYLSKPDGSYVEMTVEELLPASFGPEDLKMKKANIRNEF

Target ORF information:

RefSeq Version	NM_205679.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio cytidine deaminase b (cdab), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_205679.1

ORF Insert Sequence:

ATGGAAGACC AAAAGATGAT GCATGAGCTT ATTAATGGGT TGAATGGGCA CTTGTTGGGA 
ATAAAAGAGT TGACTCGAAA ATCTCAAGAG GCTAAGAAGT TTGCCTATTG CCCATACAGC 
AAGTTTCGAG TCGGGGCAGC ACTGCTGACA CATGACGGGA CGGTTTTCAC AGGGTGTAAC 
GTGGAAAACG CATGCTTCAA CCTGGGAATC TGTGCTGAGA GAGTTGCCAT TTCCAAAGCT 
GTATCTGAGG GCTACAGGGA TTTCAAAGCC ATTGCTATTG CGAGTGATAT GTGTGAGAAC 
TTTATTTCCC CCTGTGGAGG ATGCCGGCAG TTCATGAGAG AGTTTGGTTC TAACTGGGAA 
GTGTATTTGT CCAAACCTGA CGGTTCCTAT GTTGAGATGA CGGTTGAGGA ACTTCTGCCT 
GCATCTTTCG GACCAGAGGA CTTAAAAATG AAGAAAGCGA ACATTCGGAA TGAGTTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Metabolism disruption analysis of zebrafish larvae in response to BPA and BPA analogs based on RNA-Seq technique.
Ecotoxicology and environmental safety174181-188(2019 Jun)
Qiu W,Liu S,Yang F,Dong P,Yang M,Wong M,Zheng C

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Fmrp Interacts with Adar and Regulates RNA Editing, Synaptic Density and Locomotor Activity in Zebrafish.
PLoS genetics11(12)e1005702(2015 Dec)
Shamay-Ramot A,Khermesh K,Porath HT,Barak M,Pinto Y,Wachtel C,Zilberberg A,Lerer-Goldshtein T,Efroni S,Levanon EY,Appelbaum L

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Many genes in fish have species-specific asymmetric rates of molecular evolution.
BMC genomics720(2006 Feb)
Steinke D,Salzburger W,Braasch I,Meyer A

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cdab cDNA ORF clone, Danio rerio(zebrafish)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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