upp2 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	upp2
Entrez Gene ID	393113
Full Name	uridine phosphorylase 2
Synonyms	uppl,zgc:55883
General protein information	Preferred Names uridine phosphorylase 2 Names uridine phosphorylase 2 uridine phosphorylase, like
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_200144.1	NP_956438.1	uridine phosphorylase 2

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	UPP2	XP_525947.4
Gallus gallus (chicken)	UPP2	XP_422171.2
Xenopus tropicalis (tropical clawed frog)	upp2	NP_001008174.1
Bos taurus (cattle)	UPP2	NP_001069511.1
Rattus norvegicus (Norway rat)	Upp2	NP_001099951.1
Macaca mulatta (Rhesus monkey)	LOC698067	XP_001089251.2
Danio rerio (zebrafish)	upp2	NP_956438.1
Caenorhabditis elegans (roundworm)	upp-1	NP_498671.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000188	XP_310948.4
Homo sapiens (human)	UPP2	NP_001128570.1
Mus musculus (house mouse)	Upp2	NP_083968.1
Drosophila melanogaster (fruit fly)	CG6330	NP_651515.1

Gene Ontology
Bibliography

Related articles in PubMed

Metabolism disruption analysis of zebrafish larvae in response to BPA and BPA analogs based on RNA-Seq technique.
Qiu W, Liu S, Yang F, Dong P, Yang M, Wong M, Zheng C
Ecotoxicology and environmental safety174181-188(2019 Jun)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Briolat V, Jouneau L, Carvalho R, Palha N, Langevin C, Herbomel P, Schwartz O, Spaink HP, Levraud JP, Boudinot P
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)

Phylogenetic and chromosomal analyses of multiple gene families syntenic with vertebrate Hox clusters.
Sundström G, Larsson TA, Larhammar D
BMC evolutionary biology8254(2008 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following upp2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the upp2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa34937	NM_200144.1 Latest version!	Danio rerio uridine phosphorylase 2 (upp2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

upp2 ( NM_200144.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956438.1 Danio rerio uridine phosphorylase 2 (upp2), mRNA.

Price & Availability↑

CloneID	ODa34937
Clone ID Related Accession (Same CDS sequence)	NM_200144.1
Accession Version	NM_200144.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 942bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1576771200000
Organism	Danio rerio(zebrafish)
Product	uridine phosphorylase 2
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044525.1. ##Evidence-Data-START## Transcript exon combination :: BC044525.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGCACTTA TTTTAATAAA CAACACTGGA AATAAGCACA ACAATTATAT TCGACAGGCG 
AAGTATGTGA ATAATCCTCA TCTGGATGGC ATGGAAGAGG ACATCTTGTA CCATTTCAGC 
CTGAGCACCA AGACCCATGA CCTGCCCCAG ATGTTTGGCG ATGTAAAGTT TGTTTGTGTT 
GGTGGAAGTC CCAATAGAAT GAGAACTTTT GCTGAATATA TACATGAGCA GCTGGAGATG 
CCCAGTAACA CAGCAGACAT TAAAGATATC TGTGAAGGAA CAGACAGATA CTCGATGTAT 
AAAGTGGGAC CTGTGCTTTC CATAAGTCAT GGCGTGGGTG TTCCCTCCAT CTCCATCATG 
CTGCATGAGC TCATTAAATT GCTCTATCAT GCTCGCTGTC GTGGTGTCAT CATCTTTCGC 
ATTGGCACAT CAGGTGGAAT TGGCTTGGCT GCAGGTACAA TAGTGATCAC AGATAAAGCT 
GTGGACTCAT TCTTCAGGCC ACAGTTTGAG CAGGTGGTTT TGGGAAAGGT AATCACCAGG 
AGCACAGAGC TTGATGTGGA TATAGCCCAA GAACTACTGC AGTATTCATC TGAGCTTACA 
GATATGCCCA CTGTATTTGC AAACACAATG TGCACGCATG ATTTCTACGA AGGTCAGGGG 
CGCCTGGATG GAGCCCTGTG CTCATTTTCT ACTGAAGAAA AATTTGAATA TCTGCGGAAA 
GCAAGTAAAG CAGGTGTCAG AAACATTGAG ATGGAGTCCA GTGTCTTTGC TGCCATGTGT 
CATGTCTGCA ATCTTAAAGC TGCAGTGGTG TGTGTGACTC TTCTGAATCG GTTTGAGGGG 
GATCAGATTT CTACACCTCA TGATATTCTT ATGGAATATC AACAGAGACC ACAGCGTCTT 
GTGGCTCACC TAATCAAAAA ACGGCTCGGA CTTATCTCAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956438.1
CDS	190..1131
Translation	MALILINNTGNKHNNYIRQAKYVNNPHLDGMEEDILYHFSLSTKTHDLPQMFGDVKFVCVGGSPNRMRTFAEYIHEQLEMPSNTADIKDICEGTDRYSMYKVGPVLSISHGVGVPSISIMLHELIKLLYHARCRGVIIFRIGTSGGIGLAAGTIVITDKAVDSFFRPQFEQVVLGKVITRSTELDVDIAQELLQYSSELTDMPTVFANTMCTHDFYEGQGRLDGALCSFSTEEKFEYLRKASKAGVRNIEMESSVFAAMCHVCNLKAAVVCVTLLNRFEGDQISTPHDILMEYQQRPQRLVAHLIKKRLGLIS

Target ORF information:

RefSeq Version	NM_200144.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio uridine phosphorylase 2 (upp2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200144.1

ORF Insert Sequence:

ATGGCACTTA TTTTAATAAA CAACACTGGA AATAAGCACA ACAATTATAT TCGACAGGCG 
AAGTATGTGA ATAATCCTCA TCTGGATGGC ATGGAAGAGG ACATCTTGTA CCATTTCAGC 
CTGAGCACCA AGACCCATGA CCTGCCCCAG ATGTTTGGCG ATGTAAAGTT TGTTTGTGTT 
GGTGGAAGTC CCAATAGAAT GAGAACTTTT GCTGAATATA TACATGAGCA GCTGGAGATG 
CCCAGTAACA CAGCAGACAT TAAAGATATC TGTGAAGGAA CAGACAGATA CTCGATGTAT 
AAAGTGGGAC CTGTGCTTTC CATAAGTCAT GGCGTGGGTG TTCCCTCCAT CTCCATCATG 
CTGCATGAGC TCATTAAATT GCTCTATCAT GCTCGCTGTC GTGGTGTCAT CATCTTTCGC 
ATTGGCACAT CAGGTGGAAT TGGCTTGGCT GCAGGTACAA TAGTGATCAC AGATAAAGCT 
GTGGACTCAT TCTTCAGGCC ACAGTTTGAG CAGGTGGTTT TGGGAAAGGT AATCACCAGG 
AGCACAGAGC TTGATGTGGA TATAGCCCAA GAACTACTGC AGTATTCATC TGAGCTTACA 
GATATGCCCA CTGTATTTGC AAACACAATG TGCACGCATG ATTTCTACGA AGGTCAGGGG 
CGCCTGGATG GAGCCCTGTG CTCATTTTCT ACTGAAGAAA AATTTGAATA TCTGCGGAAA 
GCAAGTAAAG CAGGTGTCAG AAACATTGAG ATGGAGTCCA GTGTCTTTGC TGCCATGTGT 
CATGTCTGCA ATCTTAAAGC TGCAGTGGTG TGTGTGACTC TTCTGAATCG GTTTGAGGGG 
GATCAGATTT CTACACCTCA TGATATTCTT ATGGAATATC AACAGAGACC ACAGCGTCTT 
GTGGCTCACC TAATCAAAAA ACGGCTCGGA CTTATCTCAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Metabolism disruption analysis of zebrafish larvae in response to BPA and BPA analogs based on RNA-Seq technique.
Ecotoxicology and environmental safety174181-188(2019 Jun)
Qiu W,Liu S,Yang F,Dong P,Yang M,Wong M,Zheng C

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)
Briolat V,Jouneau L,Carvalho R,Palha N,Langevin C,Herbomel P,Schwartz O,Spaink HP,Levraud JP,Boudinot P

Phylogenetic and chromosomal analyses of multiple gene families syntenic with vertebrate Hox clusters.
BMC evolutionary biology8254(2008 Sep)
Sundström G,Larsson TA,Larhammar D

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upp2 cDNA ORF clone, Danio rerio(zebrafish)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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