tbp cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	tbp
Entrez Gene ID	368882
Full Name	TATA box binding protein
Synonyms	fd20h06,si:zc101n13.2,wu:fd20h06,zgc:66213
General protein information	Preferred Names TATA box binding protein Names TATA-box-binding protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_200096.1	NP_956390.1	TATA-box-binding protein

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	tbp	NP_956390.1
Saccharomyces cerevisiae (baker's yeast)	SPT15	NP_011075.3
Xenopus tropicalis (tropical clawed frog)	tbp	NP_001016339.1
Pan troglodytes (chimpanzee)	TBP	NP_001098077.1
Bos taurus (cattle)	TBP	NP_001069210.1
Eremothecium gossypii	AGOS_AGR134W	NP_986800.1
Homo sapiens (human)	TBP	NP_003185.1
Rattus norvegicus (Norway rat)	Tbp	NP_001004198.1
Schizosaccharomyces pombe (fission yeast)	tbp1	NP_594566.1
Neurospora crassa	NCU04770	XP_960219.1
Magnaporthe oryzae (rice blast fungus)	MGG_15601	XP_003713902.1
Kluyveromyces lactis	KLLA0E10099g	XP_454405.1
Oryza sativa (rice)	Os10g0432300	NP_001064668.1
Mus musculus (house mouse)	Tbp	NP_038712.3
Gallus gallus (chicken)	TBP	NP_990434.1
Canis lupus familiaris (dog)	TBP	XP_005627794.1
Macaca mulatta (Rhesus monkey)	TBP	XP_001085368.1

Gene Ontology
Bibliography

Related articles in PubMed

Modulation of the multixenobiotic resistance mechanism in Danio rerio hepatocyte culture (ZF-L) after exposure to glyphosate and Roundup
Fernanda Moreira L, Juliana Zomer S, Marta Marques S
Chemosphere228159-165(2019 Aug)

Macrophages target Salmonella by Lc3-associated phagocytosis in a systemic infection model.
Masud S, Prajsnar TK, Torraca V, Lamers GEM, Benning M, Van Der Vaart M, Meijer AH
Autophagy15(5)796-812(2019 05)

In vitro and in vivo studies of oxidative stress responses against acrylamide toxicity in zebrafish.
Komoike Y, Matsuoka M
Journal of hazardous materials365430-439(2019 Mar)

Single-molecule imaging correlates decreasing nuclear volume with increasing TF-chromatin associations during zebrafish development.
Reisser M, Palmer A, Popp AP, Jahn C, Weidinger G, Gebhardt JCM
Nature communications9(1)5218(2018 12)

Toxicity Evaluation and Biomarker Selection with Validated Reference Gene in Embryonic Zebrafish Exposed to Mitoxantrone.
Liu L, Zhu H, Yan Y, Lv P, Wu W
International journal of molecular sciences19(11)(2018 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following tbp gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tbp cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa01535	NM_200096.1 Latest version!	Danio rerio TATA box binding protein (tbp), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

tbp ( NM_200096.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956390.1 Danio rerio TATA box binding protein (tbp), mRNA.

Price & Availability↑

CloneID	ODa01535
Clone ID Related Accession (Same CDS sequence)	NM_200096.1
Accession Version	NM_200096.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 909bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1576771200000
Organism	Danio rerio(zebrafish)
Product	TATA-box-binding protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055549.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC055549.1, BC065860.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGAGCAGA ACAACAGCCT ACCTCCTTTC GCTCAAGGTC TGGCATCTCC ACAGGGAGCC 
ATGACGCCTG GCCTGCCCAT TTTCAGTCCT ATGATGCCGT ATGGGACGGG CCTCACACCG 
CAGCCTGTGC AGAACTCCAA CAGCTTGTCC CTCCTGGAGG AGCAACAGAG GCAACAACAG 
CAGCAGCAGG CGGCCTCACA GCAGCAGGGT GGGATGGTGG GAGGTTCAGG CCAGACGCCC 
CAGCTTTACC ACTCAACACA AGCCGTCTCC ACAACAACAG CTCTGCCAGG CAACACACCA 
CTTTATACCA CACCCCTCAC CCCTATGACG CCTATCACTC CTGCCACACC GGCCTCCGAG 
AGCTCTGGCA TCGTCCCGCA GTTACAGAAT ATTGTGTCCA CCGTAAACTT GGGGTGCAAA 
CTTGATTTGA AGACGATAGC ACTTCGAGCC AGAAATGCTG AATATAATCC AAAGCGTTTT 
GCTGCCGTCA TCATGAGAAT ACGAGAACCC AGAACAACAG CGCTTATCTT CAGCTCGGGG 
AAGATGGTGT GCACAGGAGC CAAAAGTGAG GAACAGTCTC GATTGGCAGC CAGGAAATAT 
GCCAGAGTGG TGCAGAAGTT GGGTTTCCCT GCCAAATTCT TAGACTTCAA AATCCAGAAC 
ATGGTGGGGA GCTGCGATGT CAAGTTTCCC ATCCGATTAG AGGGCCTGGT GCTTACCCAC 
CAGCAGTTTA GCAGCTATGA ACCGGAGTTA TTTCCAGGGT TAATCTACAG AATGATCAAA 
CCCAGAATCG TTCTTTTAAT ATTTGTTTCA GGCAAAGTCG TACTCACAGG TGCCAAGGTT 
AGAGGAGAAA TCTATGAAGC ATTTGAGAAT ATTTACCCCA TCTTAAAAGG ATTCAGGAAG 
ACCTCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956390.1
CDS	154..1062
Translation	MEQNNSLPPFAQGLASPQGAMTPGLPIFSPMMPYGTGLTPQPVQNSNSLSLLEEQQRQQQQQQAASQQQGGMVGGSGQTPQLYHSTQAVSTTTALPGNTPLYTTPLTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTS

Target ORF information:

RefSeq Version	NM_200096.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio TATA box binding protein (tbp), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200096.1

ORF Insert Sequence:

ATGGAGCAGA ACAACAGCCT ACCTCCTTTC GCTCAAGGTC TGGCATCTCC ACAGGGAGCC 
ATGACGCCTG GCCTGCCCAT TTTCAGTCCT ATGATGCCGT ATGGGACGGG CCTCACACCG 
CAGCCTGTGC AGAACTCCAA CAGCTTGTCC CTCCTGGAGG AGCAACAGAG GCAACAACAG 
CAGCAGCAGG CGGCCTCACA GCAGCAGGGT GGGATGGTGG GAGGTTCAGG CCAGACGCCC 
CAGCTTTACC ACTCAACACA AGCCGTCTCC ACAACAACAG CTCTGCCAGG CAACACACCA 
CTTTATACCA CACCCCTCAC CCCTATGACG CCTATCACTC CTGCCACACC GGCCTCCGAG 
AGCTCTGGCA TCGTCCCGCA GTTACAGAAT ATTGTGTCCA CCGTAAACTT GGGGTGCAAA 
CTTGATTTGA AGACGATAGC ACTTCGAGCC AGAAATGCTG AATATAATCC AAAGCGTTTT 
GCTGCCGTCA TCATGAGAAT ACGAGAACCC AGAACAACAG CGCTTATCTT CAGCTCGGGG 
AAGATGGTGT GCACAGGAGC CAAAAGTGAG GAACAGTCTC GATTGGCAGC CAGGAAATAT 
GCCAGAGTGG TGCAGAAGTT GGGTTTCCCT GCCAAATTCT TAGACTTCAA AATCCAGAAC 
ATGGTGGGGA GCTGCGATGT CAAGTTTCCC ATCCGATTAG AGGGCCTGGT GCTTACCCAC 
CAGCAGTTTA GCAGCTATGA ACCGGAGTTA TTTCCAGGGT TAATCTACAG AATGATCAAA 
CCCAGAATCG TTCTTTTAAT ATTTGTTTCA GGCAAAGTCG TACTCACAGG TGCCAAGGTT 
AGAGGAGAAA TCTATGAAGC ATTTGAGAAT ATTTACCCCA TCTTAAAAGG ATTCAGGAAG 
ACCTCGTAA