sept9a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	sept9a
Entrez Gene ID	337243
Full Name	septin 9a
Synonyms	cb999,fb02h06,msf,sept9,wu:fb02h06
General protein information	Preferred Names septin 9a Names septin-9 MLL septin-like fusion septin 9
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_198911.1	NP_944593.1	septin-9

Pathways from BioSystems

Homologies

Kluyveromyces lactis	KLLA0F12848g	XP_455659.1
Homo sapiens (human)	SEPT9	NP_001106963.1
Mus musculus (house mouse)	Sept9	NP_001106958.1
Xenopus tropicalis (tropical clawed frog)	sept9	XP_002935967.1
Neurospora crassa	NCU03515	XP_955871.1
Rattus norvegicus (Norway rat)	Sept9	NP_114025.2
Saccharomyces cerevisiae (baker's yeast)	CDC10	NP_009928.1
Eremothecium gossypii	AGOS_AAR001C	NP_982542.1
Schizosaccharomyces pombe (fission yeast)	spn2	NP_593159.1
Canis lupus familiaris (dog)	SEPT9	XP_005624215.1
Gallus gallus (chicken)	SEPT9	NP_001025872.1
Danio rerio (zebrafish)	sept9a	NP_944593.1
Magnaporthe oryzae (rice blast fungus)	MGG_06726	XP_003709437.1
Bos taurus (cattle)	SEPT9	XP_003587532.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 03)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Alternative splicing of sept9a and sept9b in zebrafish produces multiple mRNA transcripts expressed throughout development.
Landsverk ML, Weiser DC, Hannibal MC, Kimelman D
PloS one5(5)e10712(2010 May)

Phylogenetic and evolutionary analysis of the septin protein family in metazoan.
Cao L, Ding X, Yu W, Yang X, Shen S, Yu L
FEBS letters581(28)5526-32(2007 Nov)

Analysis of septins across kingdoms reveals orthology and new motifs.
Pan F, Malmberg RL, Momany M
BMC evolutionary biology7103(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following sept9a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sept9a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa32838	NM_198911.1 Latest version!	Danio rerio septin 9a (sept9a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

sept9a ( NM_198911.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_944593.1 Danio rerio septin 9a (sept9a), mRNA.

Price & Availability↑

CloneID	ODa32838
Clone ID Related Accession (Same CDS sequence)	NM_198911.1
Accession Version	NM_198911.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1755bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1548432000000
Organism	Danio rerio(zebrafish)
Product	septin-9
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY398383.1. On or before Jul 6, 2005 this sequence version replaced XM_702517.1, XM_679575.1, XM_702518.1. ##Evidence-Data-START## Transcript exon combination :: AY398383.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGAGGGGG ACAAAATCGC AGCACTTAAG AGGTCATTTG AAGTGGAGGA GGATACATCC 
ACAAACCCTT CCCCGCTTTC CCGTAGAACA ACCAACCCTC TGCGCTCCTC CGGCACTTCA 
TCAAGCAGTC GTTTCCATGA CCTGAGATCC CTGAACTCTG AGCCCATGTC CAGGCACGCT 
TCAGATTCCT CCTCCAACCA GCGCTCTCCA AAGTCCAGCC TGCGCCGTGT GGAGTTATCA 
GGAGGCCGTG TTCCAGAGAC TGTGTCACGT AGGACAGAGA TCTCCATTGA CATCTCCTCA 
AAGCAGGTGG ACAGCTCGCC CAGTCCTGGC ATTGCCCGTT TTGGCTTAAA AAGACCTGAA 
GTCTCGCTTC AAAGCAAAGC CACAGATGCA CCTCTCCACA GAAGGGCTGA AGGTAACCAC 
AGCAGAGCCC AGGAACCCCC AGCACCTCCC AGAAGAGCTG ACCCGCCAGT ATCTACATCC 
CGGATCCCTG AGCTGTCCCA AAGGCGAGCA GAGCCTCCCA GCCCTCTTGA CATCTCCGCT 
CCATCTAGAC GGGCTGAGAT GCACGTTAAC AGACAGCTCT CGGACACACA GTCTCCTGCA 
AGAGAGTCAG AGAACAGCTT CACCTCGGCA GCCAGCATCA CTCCTACCTT CAATGAATAC 
AAAACCCCTC CATCAGTGCA TGAAGCCCCC ATAAGGCCTC TTGAGAGGTC AGAGGTCACT 
TCCAGCTACA GCAGCAGTAG CAGCAGCAGC AGTAGCATCA TGGCAGATTC TGTTATCTCA 
GAGATTCCCC CAACCATGTG CCTGGAAAAA CCCAGCATCG ACTTCAGCTA CGTGGGCATC 
GATGCCATCC TGGAGCAGAT GAGGAGGAAG GCTATGAAAC AGGGCTTTGA GCTCAACATC 
ATGGTAGTGG GTCAGAGTGG TTTGGGGAAG TCCACACTGA TGAACACGCT CTTTAAGTCT 
AAGGTGAGCC GTAAGTCTTT CATGGGTACA GCTGAGGAAA AGATCCCCAA AACCATCGAG 
ATCAAGTCCG TCAGTCATGA CATTGAGGAG AAAGGAGTTC GTATGAAGCT GACGGTCATA 
GACACACCAG GGTTTGGGGA CCAGATCAAC AATGAGAATT GTTGGCAGCC CATAATGAAG 
TTCATCAATG ACCAGTATGA GCAGTACTTG CAGGAAGAGA TCAACATTGA CAGGAAGAAG 
AGGATCCCAG AATCACGAGT GCACTGCTGC ATATACTTCA TACCACCCAC AGGACACTGT 
CTTAGGCCTT TGGATGTAGA GTTTATGAGG CGTCTCAGTA AGGTGGTGAA CATAGTTCCT 
GTTATCGCTA AGGCTGACAC TCTGACTTTA GAGGAGAGAG ACTTCTTTAA AAAGAAGATC 
AGGGAAGAGC TTCGAGCCAA TGGGATTGAC GTCTATCCAC AGAAAGAGTT TGACGAGGAT 
GCAGAGGACA GAATGATTAA TGAGAAAATA AGAGAGATGA TCCCTTTCGC AGTAGTAGGA 
AGTGACCAGG AGTACCAGGT CAATGGGAGA CGACTCTTGG GAAGAAAAAC AAAATGGGGA 
ACCATTGAAG TTGAGAATAT TGCCCACTGT GAGTTTGCCT ACCTGCGGGA CCTCCTTATA 
AGAACCCACA TGCAGAACAT TAAAGACATC ACCAGCAGTA TCCACTATGA GATGTACCGT 
GTCCGTCGGC TCAACGAGAA TAACACTCAA GCCAATGGTC TCGCCGATCA CCATCCGGCC 
TCTCACGAAA TATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_944593.1
CDS	7..1761
Translation	MEGDKIAALKRSFEVEEDTSTNPSPLSRRTTNPLRSSGTSSSSRFHDLRSLNSEPMSRHASDSSSNQRSPKSSLRRVELSGGRVPETVSRRTEISIDISSKQVDSSPSPGIARFGLKRPEVSLQSKATDAPLHRRAEGNHSRAQEPPAPPRRADPPVSTSRIPELSQRRAEPPSPLDISAPSRRAEMHVNRQLSDTQSPARESENSFTSAASITPTFNEYKTPPSVHEAPIRPLERSEVTSSYSSSSSSSSSIMADSVISEIPPTMCLEKPSIDFSYVGIDAILEQMRRKAMKQGFELNIMVVGQSGLGKSTLMNTLFKSKVSRKSFMGTAEEKIPKTIEIKSVSHDIEEKGVRMKLTVIDTPGFGDQINNENCWQPIMKFINDQYEQYLQEEINIDRKKRIPESRVHCCIYFIPPTGHCLRPLDVEFMRRLSKVVNIVPVIAKADTLTLEERDFFKKKIREELRANGIDVYPQKEFDEDAEDRMINEKIREMIPFAVVGSDQEYQVNGRRLLGRKTKWGTIEVENIAHCEFAYLRDLLIRTHMQNIKDITSSIHYEMYRVRRLNENNTQANGLADHHPASHEI

Target ORF information:

RefSeq Version	NM_198911.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio septin 9a (sept9a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_198911.1

ORF Insert Sequence:

ATGGAGGGGG ACAAAATCGC AGCACTTAAG AGGTCATTTG AAGTGGAGGA GGATACATCC 
ACAAACCCTT CCCCGCTTTC CCGTAGAACA ACCAACCCTC TGCGCTCCTC CGGCACTTCA 
TCAAGCAGTC GTTTCCATGA CCTGAGATCC CTGAACTCTG AGCCCATGTC CAGGCACGCT 
TCAGATTCCT CCTCCAACCA GCGCTCTCCA AAGTCCAGCC TGCGCCGTGT GGAGTTATCA 
GGAGGCCGTG TTCCAGAGAC TGTGTCACGT AGGACAGAGA TCTCCATTGA CATCTCCTCA 
AAGCAGGTGG ACAGCTCGCC CAGTCCTGGC ATTGCCCGTT TTGGCTTAAA AAGACCTGAA 
GTCTCGCTTC AAAGCAAAGC CACAGATGCA CCTCTCCACA GAAGGGCTGA AGGTAACCAC 
AGCAGAGCCC AGGAACCCCC AGCACCTCCC AGAAGAGCTG ACCCGCCAGT ATCTACATCC 
CGGATCCCTG AGCTGTCCCA AAGGCGAGCA GAGCCTCCCA GCCCTCTTGA CATCTCCGCT 
CCATCTAGAC GGGCTGAGAT GCACGTTAAC AGACAGCTCT CGGACACACA GTCTCCTGCA 
AGAGAGTCAG AGAACAGCTT CACCTCGGCA GCCAGCATCA CTCCTACCTT CAATGAATAC 
AAAACCCCTC CATCAGTGCA TGAAGCCCCC ATAAGGCCTC TTGAGAGGTC AGAGGTCACT 
TCCAGCTACA GCAGCAGTAG CAGCAGCAGC AGTAGCATCA TGGCAGATTC TGTTATCTCA 
GAGATTCCCC CAACCATGTG CCTGGAAAAA CCCAGCATCG ACTTCAGCTA CGTGGGCATC 
GATGCCATCC TGGAGCAGAT GAGGAGGAAG GCTATGAAAC AGGGCTTTGA GCTCAACATC 
ATGGTAGTGG GTCAGAGTGG TTTGGGGAAG TCCACACTGA TGAACACGCT CTTTAAGTCT 
AAGGTGAGCC GTAAGTCTTT CATGGGTACA GCTGAGGAAA AGATCCCCAA AACCATCGAG 
ATCAAGTCCG TCAGTCATGA CATTGAGGAG AAAGGAGTTC GTATGAAGCT GACGGTCATA 
GACACACCAG GGTTTGGGGA CCAGATCAAC AATGAGAATT GTTGGCAGCC CATAATGAAG 
TTCATCAATG ACCAGTATGA GCAGTACTTG CAGGAAGAGA TCAACATTGA CAGGAAGAAG 
AGGATCCCAG AATCACGAGT GCACTGCTGC ATATACTTCA TACCACCCAC AGGACACTGT 
CTTAGGCCTT TGGATGTAGA GTTTATGAGG CGTCTCAGTA AGGTGGTGAA CATAGTTCCT 
GTTATCGCTA AGGCTGACAC TCTGACTTTA GAGGAGAGAG ACTTCTTTAA AAAGAAGATC 
AGGGAAGAGC TTCGAGCCAA TGGGATTGAC GTCTATCCAC AGAAAGAGTT TGACGAGGAT 
GCAGAGGACA GAATGATTAA TGAGAAAATA AGAGAGATGA TCCCTTTCGC AGTAGTAGGA 
AGTGACCAGG AGTACCAGGT CAATGGGAGA CGACTCTTGG GAAGAAAAAC AAAATGGGGA 
ACCATTGAAG TTGAGAATAT TGCCCACTGT GAGTTTGCCT ACCTGCGGGA CCTCCTTATA 
AGAACCCACA TGCAGAACAT TAAAGACATC ACCAGCAGTA TCCACTATGA GATGTACCGT 
GTCCGTCGGC TCAACGAGAA TAACACTCAA GCCAATGGTC TCGCCGATCA CCATCCGGCC 
TCTCACGAAA TATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 03)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Alternative splicing of sept9a and sept9b in zebrafish produces multiple mRNA transcripts expressed throughout development.
PloS one5(5)e10712(2010 May)
Landsverk ML,Weiser DC,Hannibal MC,Kimelman D

Phylogenetic and evolutionary analysis of the septin protein family in metazoan.
FEBS letters581(28)5526-32(2007 Nov)
Cao L,Ding X,Yu W,Yang X,Shen S,Yu L

Analysis of septins across kingdoms reveals orthology and new motifs.
BMC evolutionary biology7103(2007 Jul)
Pan F,Malmberg RL,Momany M