RPL9 cDNA ORF clone, Danio rerio(Zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	RPL9
Entrez Gene ID	336702
Full Name	ribosomal protein L9
Synonyms	ab02c03,fa93a01,mg:ab02c03,wu:fa93a01,zgc:103730
General protein information	Preferred Names ribosomal protein L9 Names 60S ribosomal protein L9
Gene Type	protein-coding
Organism	Danio rerio(Zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005170907.4	XP_005170964.1	60S ribosomal protein L9 isoform X2
NM_001003861.1	NP_001003861.1	60S ribosomal protein L9
XM_005170906.3	XP_005170963.1	60S ribosomal protein L9 isoform X1
XM_005170906.4	XP_005170963.1	60S ribosomal protein L9 isoform X1
XM_005170907.3	XP_005170964.1	60S ribosomal protein L9 isoform X2

Pathways from BioSystems

Homologies

Eremothecium gossypii	AGOS_ADL290W	NP_983806.1
Magnaporthe oryzae (rice blast fungus)	MGG_04829	XP_003713758.1
Mus musculus (house mouse)	Rpl9	NP_035422.1
Danio rerio (zebrafish)	rpl9	NP_001003861.1
Drosophila melanogaster (fruit fly)	RpL9	NP_477161.1
Arabidopsis thaliana (thale cress)	AT1G33120	NP_564417.1
Rattus norvegicus (Norway rat)	LOC100360449	XP_002729193.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009508	XP_310188.3
Homo sapiens (human)	RPL9	NP_001020092.1
Pan troglodytes (chimpanzee)	RPL9	XP_003950356.1
Macaca mulatta (Rhesus monkey)	LOC706496	XP_001094980.1
Canis lupus familiaris (dog)	RPL9	XP_536256.1
Schizosaccharomyces pombe (fission yeast)	rpl902	NP_587694.1
Saccharomyces cerevisiae (baker's yeast)	RPL9B	NP_014332.1
Arabidopsis thaliana (thale cress)	PGY2	NP_564418.1
Kluyveromyces lactis	KLLA0E09109g	XP_454360.1
Oryza sativa (rice)	Os02g0103700	NP_001045607.1
Neurospora crassa	NCU02744	XP_965129.1
Gallus gallus (chicken)	RPL9	NP_001244262.1
Saccharomyces cerevisiae (baker's yeast)	RPL9A	NP_011368.3
Arabidopsis thaliana (thale cress)	AT4G10450	NP_192783.1
Xenopus tropicalis (tropical clawed frog)	rpl9	XP_004910977.1
Oryza sativa (rice)	Os09g0485900	NP_001063520.1
Kluyveromyces lactis	KLLA0F04499g	XP_455283.1
Schizosaccharomyces pombe (fission yeast)	rpl901	NP_593698.1
Rattus norvegicus (Norway rat)	Rpl9	NP_001007599.3
Caenorhabditis elegans (roundworm)	rpl-9	NP_498660.1
Rattus norvegicus (Norway rat)	LOC100364457	XP_003748822.1

Gene Ontology
Bibliography

Related articles in PubMed

RES complex is associated with intron definition and required for zebrafish early embryogenesis.
Fernandez JP, Moreno-Mateos MA, Gohr A, Miao L, Chan SH, Irimia M, Giraldez AJ
PLoS genetics14(7)e1007473(2018 07)

Evolution of complexity in the zebrafish synapse proteome.
Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 03)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Transcriptome analysis reveals a ribosome constituents disorder involved in the RPL5 downregulated zebrafish model of Diamond-Blackfan anemia.
Wan Y, Zhang Q, Zhang Z, Song B, Wang X, Zhang Y, Jia Q, Cheng T, Zhu X, Leung AY, Yuan W, Jia H, Fang X
BMC medical genomics913(2016 Mar)

Multiple ribosomal proteins are expressed at high levels in developing zebrafish endoderm and are required for normal exocrine pancreas development.
Provost E, Weier CA, Leach SD
Zebrafish10(2)161-9(2013 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following RPL9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RPL9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa35955	NM_001003861.1 Latest version!	Danio rerio ribosomal protein L9 (rpl9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa05670	XM_005170906.4 Latest version!	Danio rerio ribosomal protein L9 (rpl9), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa05671	XM_005170907.4 Latest version!	Danio rerio ribosomal protein L9 (rpl9), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
View Old Accession Versions >>
ODa05670	XM_005170906.3	Danio rerio ribosomal protein L9 (rpl9), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa05671	XM_005170907.3	Danio rerio ribosomal protein L9 (rpl9), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

RPL9 ( NM_001003861.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> NP_001003861.1 Danio rerio ribosomal protein L9 (rpl9), mRNA.

Price & Availability↑

CloneID	ODa35955
Clone ID Related Accession (Same CDS sequence)	NM_001003861.1
Accession Version	NM_001003861.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 582bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1548432000000
Organism	Danio rerio(zebrafish)
Product	60S ribosomal protein L9
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY648736.1. On Dec 22, 2007 this sequence version replaced XM_679640.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AY648736.1, CN512882.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA4476728 [ECO:0000348] ##Evidence-Data-END##

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAG AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACC GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATTC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCTGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCTGCTCTG 
ATCCAGCAGG CCACCACTGT GAGGAAGAAG GACATCCGGA AGTTCCTGGA TGGGATTTAT 
GTCAGCGAGA AGGGCACAGT GGTGGAACAG CAAGAGGACT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001003861.1
CDS	1..582
Translation	MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNFLGEKYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVRKKDIRKFLDGIYVSEKGTVVEQQED

Target ORF information:

RefSeq Version	NM_001003861.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ribosomal protein L9 (rpl9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001003861.1

ORF Insert Sequence:

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAG AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACC GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATTC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCTGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCTGCTCTG 
ATCCAGCAGG CCACCACTGT GAGGAAGAAG GACATCCGGA AGTTCCTGGA TGGGATTTAT 
GTCAGCGAGA AGGGCACAGT GGTGGAACAG CAAGAGGACT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RPL9 ( XM_005170906.3 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_005170963.1 Danio rerio ribosomal protein L9 (rpl9), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa05670
Clone ID Related Accession (Same CDS sequence)	XM_005170906.3 , XM_005170906.4
Accession Version	XM_005170906.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 582bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	60S ribosomal protein L9 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170906.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAA AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACA GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATCC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCCGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCTGCTCTG 
ATCCAGCAGG CCACCACTGT GAGGAAGAAG GACATCCGGA AGTTCCTGGA TGGGATTTAT 
GTCAGCGAGA AGGGCACAGT GGTGGAACAG CAAGAGGACT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005170963.1
CDS	48..629
Translation	MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNFLGEKYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVRKKDIRKFLDGIYVSEKGTVVEQQED

Target ORF information:

RefSeq Version	XM_005170906.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio ribosomal protein L9 (rpl9), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005170906.3

ORF Insert Sequence:

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAA AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACA GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATCC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCCGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCTGCTCTG 
ATCCAGCAGG CCACCACTGT GAGGAAGAAG GACATCCGGA AGTTCCTGGA TGGGATTTAT 
GTCAGCGAGA AGGGCACAGT GGTGGAACAG CAAGAGGACT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RPL9 ( XM_005170906.4 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_005170963.1 Danio rerio ribosomal protein L9 (rpl9), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa05670
Clone ID Related Accession (Same CDS sequence)	XM_005170906.3 , XM_005170906.4
Accession Version	XM_005170906.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 582bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	60S ribosomal protein L9 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005170906.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAA AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACA GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATCC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCCGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCTGCTCTG 
ATCCAGCAGG CCACCACTGT GAGGAAGAAG GACATCCGGA AGTTCCTGGA TGGGATTTAT 
GTCAGCGAGA AGGGCACAGT GGTGGAACAG CAAGAGGACT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005170963.1
CDS	70..651
Translation	MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNFLGEKYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVRKKDIRKFLDGIYVSEKGTVVEQQED

Target ORF information:

RefSeq Version	XM_005170906.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ribosomal protein L9 (rpl9), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005170906.4

ORF Insert Sequence:

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAA AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACA GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATCC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCCGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCTGCTCTG 
ATCCAGCAGG CCACCACTGT GAGGAAGAAG GACATCCGGA AGTTCCTGGA TGGGATTTAT 
GTCAGCGAGA AGGGCACAGT GGTGGAACAG CAAGAGGACT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RPL9 ( XM_005170907.4 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_005170964.1 Danio rerio ribosomal protein L9 (rpl9), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa05671
Clone ID Related Accession (Same CDS sequence)	XM_005170907.4 , XM_005170907.3
Accession Version	XM_005170907.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	60S ribosomal protein L9 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005170907.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAA AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACA GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATCC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCCGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCGGCCCTC 
ATCCAGCAGG CAACCACAGT GAAAAATAAG GATATCAGAA AGTTCCTGGA CGGTATTTAC 
GTCTCTGAAA AAGGCACTGT AGTGGAGGCA GAGTCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005170964.1
CDS	62..640
Translation	MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNFLGEKYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVEAES

Target ORF information:

RefSeq Version	XM_005170907.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ribosomal protein L9 (rpl9), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005170907.4

ORF Insert Sequence:

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAA AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACA GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATCC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCCGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCGGCCCTC 
ATCCAGCAGG CAACCACAGT GAAAAATAAG GATATCAGAA AGTTCCTGGA CGGTATTTAC 
GTCTCTGAAA AAGGCACTGT AGTGGAGGCA GAGTCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RPL9 ( XM_005170907.3 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_005170964.1 Danio rerio ribosomal protein L9 (rpl9), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa05671
Clone ID Related Accession (Same CDS sequence)	XM_005170907.4 , XM_005170907.3
Accession Version	XM_005170907.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	60S ribosomal protein L9 isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170907.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAA AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACA GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATCC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCCGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCGGCCCTC 
ATCCAGCAGG CAACCACAGT GAAAAATAAG GATATCAGAA AGTTCCTGGA CGGTATTTAC 
GTCTCTGAAA AAGGCACTGT AGTGGAGGCA GAGTCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005170964.1
CDS	48..626
Translation	MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNFLGEKYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVEAES

Target ORF information:

RefSeq Version	XM_005170907.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio ribosomal protein L9 (rpl9), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005170907.3

ORF Insert Sequence:

ATGAAGACCA TTCTCAGTAA CCAGACAGTG GACATCCCTG ACAATGTCAC GGTGTCCCTC 
AAGGGCCGCA CAGTTACCGT GAAGGGACCC CGTGGTGTTC TCCGCCGGGA GTTCAACCAC 
ATTAACCTGG AACTCAGTCT GTTGGGCAAA AAACAGAAAA AGCTGCGTGT GGATAAGTGG 
TGGGGTAACA GAAAGGAGTT GGCCACCGTC CGCACCATCT GCAGTCATGT CCAGAACATG 
ATCAAGGGTG TCACCCTGGG CTTCAGGTAC AAAATGCGAT CTGTATATGC CCATTTTCCC 
ATTAATGTGG TCATCCAAGA GTCTGGCTCT CTGGTGGAGA TCAGAAACTT CTTGGGAGAG 
AAGTACATCC GCCGTGTCCG CATGAGGCAA GGAGTTGCAT GTGCAGTGTC TGCCGCTCAA 
AAAGACGAGT TGGTTCTGGA GGGTAATGAT ATTGAGCTGG TGTCAAACTC AGCGGCCCTC 
ATCCAGCAGG CAACCACAGT GAAAAATAAG GATATCAGAA AGTTCCTGGA CGGTATTTAC 
GTCTCTGAAA AAGGCACTGT AGTGGAGGCA GAGTCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RES complex is associated with intron definition and required for zebrafish early embryogenesis.
PLoS genetics14(7)e1007473(2018 07)
Fernandez JP,Moreno-Mateos MA,Gohr A,Miao L,Chan SH,Irimia M,Giraldez AJ

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 03)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Transcriptome analysis reveals a ribosome constituents disorder involved in the RPL5 downregulated zebrafish model of Diamond-Blackfan anemia.
BMC medical genomics913(2016 Mar)
Wan Y,Zhang Q,Zhang Z,Song B,Wang X,Zhang Y,Jia Q,Cheng T,Zhu X,Leung AY,Yuan W,Jia H,Fang X

Multiple ribosomal proteins are expressed at high levels in developing zebrafish endoderm and are required for normal exocrine pancreas development.
Zebrafish10(2)161-9(2013 Jun)
Provost E,Weier CA,Leach SD

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RPL9 cDNA ORF clone, Danio rerio(Zebrafish)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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