cntn5 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	cntn5
Entrez Gene ID	327429
Full Name	contactin 5
Synonyms	fi09g01,wu:fi09g01,zgc:55318
General protein information	Preferred Names contactin 5 Names contactin-5
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_199804.1	NP_956098.1	contactin-5

Pathways from BioSystems

Homologies

Macaca mulatta (Rhesus monkey)	CNTN5	XP_001094748.1
Rattus norvegicus (Norway rat)	Cntn5	NP_446198.1
Danio rerio (zebrafish)	cntn5	NP_956098.1
Gallus gallus (chicken)	CNTN5	NP_989943.1
Homo sapiens (human)	CNTN5	NP_001230199.1
Canis lupus familiaris (dog)	CNTN5	XP_005633369.1
Mus musculus (house mouse)	Cntn5	NP_001164258.1
Pan troglodytes (chimpanzee)	CNTN5	XP_001147868.2
Xenopus tropicalis (tropical clawed frog)	cntn5	XP_002935618.2

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 03)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Rapid reverse genetic screening using CRISPR in zebrafish.
Shah AN, Davey CF, Whitebirch AC, Miller AC, Moens CB
Nature methods12(6)535-40(2015 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cntn5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cntn5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa37491	NM_199804.1 Latest version!	Danio rerio contactin 5 (cntn5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cntn5 ( NM_199804.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956098.1 Danio rerio contactin 5 (cntn5), mRNA.

Price & Availability↑

CloneID	ODa37491
Clone ID Related Accession (Same CDS sequence)	NM_199804.1
Accession Version	NM_199804.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3171bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1577116800000
Organism	Danio rerio(zebrafish)
Product	contactin-5
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045307.1. ##Evidence-Data-START## Transcript exon combination :: BC045307.1, CU458951.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGAAGGCAG ACAGTTCGTC CTCCTCCTCC ATGAGCTCCA GAATGAGGTT AAGGAACAGC 
CATGGAGTGG GATCATCCAG CCAGGACTGG TCTCCGTTCT CCAGACACAG ATACTCAGCC 
CTCAGCTCAC AGGAGGACTA CAGGAGCGAA GAGAGCGAGG AGTTTGGTCC GGTGTTCATT 
CAAGAGCCTG ACGATGCAAT TTTTTCCTTG GATTCAGACG ATAAGAAAAT CATAATGAAT 
TGTGAAGCCA GAGGAAACCC TGTTCCGACC TACAGTTGGC TGATCAATGG AACGAATGTG 
GACACAGAAG CAGATTTCCG CTACAGTTTG ATTGATGGAA ATTTAATAAT ACACAATGCA 
AGCGAAGTCA TCGATTATGG AAGATACCAG TGCAGAGCTG AAAACAGCAT TGGCATCGTC 
TTGAGTCGAG ACGCCCTCCT GCAGTTTGCC TATCTCGGCC CGTTCAGCGG TAAGACTAGA 
GGAGCTGTTT CGGTGAGGGA AGGCCAGGGG GTTGTGCTAA TGTGTGCCCC CCCTTCTCAT 
TCTCCAGAGA TCATTTACAG CTGGGTGTTC AATGAGCTCC CCTCATTCGT GGCAGAGGAC 
AGCCGGCGAT TCATCTCGCA GGAAACGGGA AATCTGTATA TCCCCAAGGT GCAGCCCTCA 
GACGTGGGCA GCTACGTGTG CCAAGTGAAG AACACTGTGA CCAACGCTAG GGTCCTGAGC 
CCGCCGACGC CCCTGACTCT CAAAACAGAT GGAGTAATGG GGGAGTACGA GCCTAAAATC 
GAAGCACATT TTCCCCAGAC GGTACTGGCA GCCAAAGGCG TCACCGTGAG GCTGGAGTGC 
TTTGCCCTTG GGAATCCTGT CCCCACAATC ACCTGGAGGA AGATGAGTGG AAACATTCCC 
AAAAAAGCCC GTCTTCGCAA ATCACAGGCT GTTCTCGAGA TCCCCAACAT CCAGCTAGAG 
GATTCTGGGA GTTACGAGTG TAAAGCTGAG AACACCAGAG GAGGCACCGC TTTCAGAGGA 
CACCTGCAGG TCTACACTCT GCCGCAGTGG ATCAGCATGA TAAATGACAC TCAACTGGAC 
AGCGGAGAGC AGCTCCGTTG GGAGTGTCGA GCCACAGGAA AGCCCAGACC TACATATCGC 
TGGCTGCGCA ATGGAGAACC ACTCAGCACA CAGAGCAGAG TGGAAATGGT GAATGGAGAG 
CTTACCATTC ACAGACTCCA GCAGGCTGAT TCGGGGATGT ACCAGTGCAT CGCAGAGAAC 
AAGTATGGAG CCATCTATTC CAGCGCAGAG CTCAAAATAC TGGCATCAGC TCCCATGTTC 
AACAACAACC CAGTCCGTCT CATCGCAACC GTTGGGAAAG ACGTGTCTCT AGAGTGCCGT 
CCTCGTGCTT CACCCAAACC CAGAATCTCA TGGAGGAAAA ACGACCGAAG ACTTCAACCC 
AGCCGAAGGA TCATGTTACT TCGGAACAAC ACCTTGCGCA TCATTAACTC CAGTCGCTCG 
GATGAGGGAA GCTACGTGTG CCGTGCAGAA AACCAGTTTG GATCAGCAGA GCTGACCACT 
GTGCTTCTGG TGAAAGAGCC CATGCGGGTG GAGTTGAGCC CCCTGCGGGT GGAGGTGACG 
GTGGGAGAGA GTGTGGTGCT CAGCTGTAAA GTCACTCATG ACCCTTCGCT GGACGTGTCC 
TTCCTCTGGC TGCTGAACAA CCAACCGCTC AACACACAGC AGGATGGAGG ACACTTTGAG 
TACATCCAAA CACAGTCCTC CACCGCAGAC CTGATGATCA GGAGCATCCT CCTGAAGCAT 
GCTGGGAAAT ATGGCTGTCG AGCTCAGACC AGCACTGACA GTGTGCTTGC TGAAGCTGAG 
CTGCTGGTGC GAGGGCCTCC TGGACCTCCT GGAGTGGTGA TTGTAGAGGA GATCACGGCC 
AGCACCGCCA CACTGTCATG GAGCCACGGT GTCGACAACC ACAGTCCAAT CACCACATAC 
AATGTACAAG CACGCAGCCC TGTCTCTCTG GGATGGCAGA CAGTGAAAAC CGATCCAGAC 
CCGGTGACAG GAAGCATGGA GTCAGCCATG GCAGTGGATC TCAACCCCTG GGTGGAGTAT 
GAGTTTCGGG TGGTGGCCAC AAACAGCATA GGCACAGGCG ACCCGAGCCC CCCATCCAGA 
GCGGTGCGCA CTAAAGAAGC AGTACCATCT GTAGCCCCTG CCAACGTTCG AGGAGGGAAC 
GGCCGCAGGC ATGAGCTGGT CATATCCTGG GAGCCAGTCT CAGAGGAGTA CCAAAACGGA 
GAAGGCTTTG GCTACATCGT GGCGTTTCGG GTCAACGGCA CACGTGGATG GAAAGAGAAG 
ATGGTGACGT CTGCAGATTC CACCACGTAC AAATACAGAG ATGAGACATT CCCCCCTCTG 
ACCCCGTTTG AGGTGCGGGT TGGGGTTTAT AACAACAAAG GCGACGGGCC CTTCAGTGAA 
GTGGTCACTG TGTTCTCTGC GGAGGGAGAG CCCAGAGAGC CACCTTCAGA AGTGCAGGCA 
TTCGCAGTCT CTTCCTCGGA AATTAAAGTC TTGTGGAAGC CGCCCAGTCC TGGACTTGGA 
AGACCCCAAG GATATGAGGT GAGCTTCTGG AAGGATGTGG AGCAGGAGGA GTTGGGGAAG 
AAGAAGAGGA CGTTGGGGAA TGAGACGAAC ATGTTGTTGT CAGGGCTGGA TGGAAACACG 
CAATATCTGG TGTCTGTGAA AGGATTCAAC AGCGCCGGTC AAGGGCCATC TAGCACAGCC 
GTCAAGATCA GCACAAAGAA AAATGCCCCA AGTCTACCTC CAGGCAACTT GATGTGGATT 
CAAGAGGGGA ACAATGTTTC TCTATCTTGG GATCCAGTGA AAGCAAGGGA CAATGAGTCA 
GAAGTCATTG GGTACAAGGT ATTATTGCGT CAAGAGGGAC GTGGCCACAG CCAAGTCATG 
AGGACTCCAA ATTCAGCAGT GGTCCTGACG CTTCCTGAAG GGGGAACATA CATCATTGAA 
GTGCGCGCAG TCAGTGAAGG AGGTGAAGGA GCCGCCAGCG CTCAGGTCAG AGTGCTCACC 
TCCTCAGGCG TGCGTGCAAA GAATGGGCAG CTCTCTGTCC AGAATTCACC TCCAGGCTTG 
GCATGGACTG CTCTTTTCCT GTCATTAATG GTGCCTTCTT TTCCCTTGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956098.1
CDS	218..3388
Translation	MKADSSSSSSMSSRMRLRNSHGVGSSSQDWSPFSRHRYSALSSQEDYRSEESEEFGPVFIQEPDDAIFSLDSDDKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNLIIHNASEVIDYGRYQCRAENSIGIVLSRDALLQFAYLGPFSGKTRGAVSVREGQGVVLMCAPPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLRNGEPLSTQSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEAELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLGWQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFRVNGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWKPPSPGLGRPQGYEVSFWKDVEQEELGKKKRTLGNETNMLLSGLDGNTQYLVSVKGFNSAGQGPSSTAVKISTKKNAPSLPPGNLMWIQEGNNVSLSWDPVKARDNESEVIGYKVLLRQEGRGHSQVMRTPNSAVVLTLPEGGTYIIEVRAVSEGGEGAASAQVRVLTSSGVRAKNGQLSVQNSPPGLAWTALFLSLMVPSFPL

Target ORF information:

RefSeq Version	NM_199804.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio contactin 5 (cntn5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_199804.1

ORF Insert Sequence:

ATGAAGGCAG ACAGTTCGTC CTCCTCCTCC ATGAGCTCCA GAATGAGGTT AAGGAACAGC 
CATGGAGTGG GATCATCCAG CCAGGACTGG TCTCCGTTCT CCAGACACAG ATACTCAGCC 
CTCAGCTCAC AGGAGGACTA CAGGAGCGAA GAGAGCGAGG AGTTTGGTCC GGTGTTCATT 
CAAGAGCCTG ACGATGCAAT TTTTTCCTTG GATTCAGACG ATAAGAAAAT CATAATGAAT 
TGTGAAGCCA GAGGAAACCC TGTTCCGACC TACAGTTGGC TGATCAATGG AACGAATGTG 
GACACAGAAG CAGATTTCCG CTACAGTTTG ATTGATGGAA ATTTAATAAT ACACAATGCA 
AGCGAAGTCA TCGATTATGG AAGATACCAG TGCAGAGCTG AAAACAGCAT TGGCATCGTC 
TTGAGTCGAG ACGCCCTCCT GCAGTTTGCC TATCTCGGCC CGTTCAGCGG TAAGACTAGA 
GGAGCTGTTT CGGTGAGGGA AGGCCAGGGG GTTGTGCTAA TGTGTGCCCC CCCTTCTCAT 
TCTCCAGAGA TCATTTACAG CTGGGTGTTC AATGAGCTCC CCTCATTCGT GGCAGAGGAC 
AGCCGGCGAT TCATCTCGCA GGAAACGGGA AATCTGTATA TCCCCAAGGT GCAGCCCTCA 
GACGTGGGCA GCTACGTGTG CCAAGTGAAG AACACTGTGA CCAACGCTAG GGTCCTGAGC 
CCGCCGACGC CCCTGACTCT CAAAACAGAT GGAGTAATGG GGGAGTACGA GCCTAAAATC 
GAAGCACATT TTCCCCAGAC GGTACTGGCA GCCAAAGGCG TCACCGTGAG GCTGGAGTGC 
TTTGCCCTTG GGAATCCTGT CCCCACAATC ACCTGGAGGA AGATGAGTGG AAACATTCCC 
AAAAAAGCCC GTCTTCGCAA ATCACAGGCT GTTCTCGAGA TCCCCAACAT CCAGCTAGAG 
GATTCTGGGA GTTACGAGTG TAAAGCTGAG AACACCAGAG GAGGCACCGC TTTCAGAGGA 
CACCTGCAGG TCTACACTCT GCCGCAGTGG ATCAGCATGA TAAATGACAC TCAACTGGAC 
AGCGGAGAGC AGCTCCGTTG GGAGTGTCGA GCCACAGGAA AGCCCAGACC TACATATCGC 
TGGCTGCGCA ATGGAGAACC ACTCAGCACA CAGAGCAGAG TGGAAATGGT GAATGGAGAG 
CTTACCATTC ACAGACTCCA GCAGGCTGAT TCGGGGATGT ACCAGTGCAT CGCAGAGAAC 
AAGTATGGAG CCATCTATTC CAGCGCAGAG CTCAAAATAC TGGCATCAGC TCCCATGTTC 
AACAACAACC CAGTCCGTCT CATCGCAACC GTTGGGAAAG ACGTGTCTCT AGAGTGCCGT 
CCTCGTGCTT CACCCAAACC CAGAATCTCA TGGAGGAAAA ACGACCGAAG ACTTCAACCC 
AGCCGAAGGA TCATGTTACT TCGGAACAAC ACCTTGCGCA TCATTAACTC CAGTCGCTCG 
GATGAGGGAA GCTACGTGTG CCGTGCAGAA AACCAGTTTG GATCAGCAGA GCTGACCACT 
GTGCTTCTGG TGAAAGAGCC CATGCGGGTG GAGTTGAGCC CCCTGCGGGT GGAGGTGACG 
GTGGGAGAGA GTGTGGTGCT CAGCTGTAAA GTCACTCATG ACCCTTCGCT GGACGTGTCC 
TTCCTCTGGC TGCTGAACAA CCAACCGCTC AACACACAGC AGGATGGAGG ACACTTTGAG 
TACATCCAAA CACAGTCCTC CACCGCAGAC CTGATGATCA GGAGCATCCT CCTGAAGCAT 
GCTGGGAAAT ATGGCTGTCG AGCTCAGACC AGCACTGACA GTGTGCTTGC TGAAGCTGAG 
CTGCTGGTGC GAGGGCCTCC TGGACCTCCT GGAGTGGTGA TTGTAGAGGA GATCACGGCC 
AGCACCGCCA CACTGTCATG GAGCCACGGT GTCGACAACC ACAGTCCAAT CACCACATAC 
AATGTACAAG CACGCAGCCC TGTCTCTCTG GGATGGCAGA CAGTGAAAAC CGATCCAGAC 
CCGGTGACAG GAAGCATGGA GTCAGCCATG GCAGTGGATC TCAACCCCTG GGTGGAGTAT 
GAGTTTCGGG TGGTGGCCAC AAACAGCATA GGCACAGGCG ACCCGAGCCC CCCATCCAGA 
GCGGTGCGCA CTAAAGAAGC AGTACCATCT GTAGCCCCTG CCAACGTTCG AGGAGGGAAC 
GGCCGCAGGC ATGAGCTGGT CATATCCTGG GAGCCAGTCT CAGAGGAGTA CCAAAACGGA 
GAAGGCTTTG GCTACATCGT GGCGTTTCGG GTCAACGGCA CACGTGGATG GAAAGAGAAG 
ATGGTGACGT CTGCAGATTC CACCACGTAC AAATACAGAG ATGAGACATT CCCCCCTCTG 
ACCCCGTTTG AGGTGCGGGT TGGGGTTTAT AACAACAAAG GCGACGGGCC CTTCAGTGAA 
GTGGTCACTG TGTTCTCTGC GGAGGGAGAG CCCAGAGAGC CACCTTCAGA AGTGCAGGCA 
TTCGCAGTCT CTTCCTCGGA AATTAAAGTC TTGTGGAAGC CGCCCAGTCC TGGACTTGGA 
AGACCCCAAG GATATGAGGT GAGCTTCTGG AAGGATGTGG AGCAGGAGGA GTTGGGGAAG 
AAGAAGAGGA CGTTGGGGAA TGAGACGAAC ATGTTGTTGT CAGGGCTGGA TGGAAACACG 
CAATATCTGG TGTCTGTGAA AGGATTCAAC AGCGCCGGTC AAGGGCCATC TAGCACAGCC 
GTCAAGATCA GCACAAAGAA AAATGCCCCA AGTCTACCTC CAGGCAACTT GATGTGGATT 
CAAGAGGGGA ACAATGTTTC TCTATCTTGG GATCCAGTGA AAGCAAGGGA CAATGAGTCA 
GAAGTCATTG GGTACAAGGT ATTATTGCGT CAAGAGGGAC GTGGCCACAG CCAAGTCATG 
AGGACTCCAA ATTCAGCAGT GGTCCTGACG CTTCCTGAAG GGGGAACATA CATCATTGAA 
GTGCGCGCAG TCAGTGAAGG AGGTGAAGGA GCCGCCAGCG CTCAGGTCAG AGTGCTCACC 
TCCTCAGGCG TGCGTGCAAA GAATGGGCAG CTCTCTGTCC AGAATTCACC TCCAGGCTTG 
GCATGGACTG CTCTTTTCCT GTCATTAATG GTGCCTTCTT TTCCCTTGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 03)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Rapid reverse genetic screening using CRISPR in zebrafish.
Nature methods12(6)535-40(2015 Jun)
Shah AN,Davey CF,Whitebirch AC,Miller AC,Moens CB

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cntn5 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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