| Gene Symbol | lhx5 |
| Entrez Gene ID | 30465 |
| Full Name | LIM homeobox 5 |
| Synonyms | lim5 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
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lhx5 cDNA ORF clone, Danio rerio(zebrafish)
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Gene
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Clones
gRNAs
The following lhx5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the lhx5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID ODa00882 Clone ID Related Accession (Same CDS sequence) NM_131218.1 Accession Version NM_131218.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 1200bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1571328000000 Organism Danio rerio(zebrafish) Product LIM/homeobox protein Lhx5 Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from L42547.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: L42547.1, BC098523.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505381, SAMEA3505391 [ECO:0000348] ##Evidence-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141ATGATGGTGC ACTGCGCGGG GTGTGAGAGG CCCATTCTGG ATCGGTTCCT CTTAAACGTT
CTGGACCGCG CATGGCACGC CAAGTGTGTC CAATGCTGCG AGTGTAACTG CAACCTGACC
GAAAAATGTT TCTCCAGGGA TGGAAAGCTC TATTGCAAAA TTGACTTTTT CAGGCGTTTT
GGTACGAAAT GTGCGGGCTG CTTGCAGGGA ATTTCGCCCA GCGATCTCGT GCGAAGAGCG
CGCAGCAAGG TGTTTCATCT CAACTGTTTC ACGTGCATGG TGTGCAACAA ACAGCTGTCC
ACGGGCGAGG AGCTCTACGT CATTGACGAA AACAAATTTG TGTGTAAAGA GGACTACCTG
AGCGCGAGCG CCATCAAAGA GGTCAATTTA AACTCAGTGT CGTCGTGTAC AGACCGGAGT
TTATCGCCTG ATCTTCCGGA TCAAATCCAG GACGACACGA AGGAGACGGA CAATTCCACA
TCTTCAGATA AAGACACTAA CAACAACGAA AACGAGGAGC AAAACTCGTG CACGAAACGG
CGAGGCCCGC GCACCACCAT CAAGGCCAAA CAGCTGGAGA CTCTGAAAGC CGCGTTCGTG
GCCACGCCGA AACCCACGCG ACACATCCGC GAGCAACTCG CGCAGGAGAC AGGCCTTAAC
ATGCGGGTGA TTCAGGTGTG GTTTCAAAAC CGGCGGTCTA AAGAACGTAG AATGAAGCAG
CTCAGTGCTC TCGGTGCTCG ACGACATGCT TTCTTCAGGG GACCACGAAG AATGAGGCCT
CTCGGAGGAA GACTAGAGGA CCCCGACATA ATGGGCCCTG GAGGATACAG CTACTACGGA
GAATACCAAG GTGACTATTA CGGCCCAGTG GTCAACTATG ATTTCTTCCC TCACGGACCC
CCTTCCTCAC AGGCACACTC TCCAGCTGAA TCCCCTTATC TTCTCAGCTC GGGTTCAGGA
GCCCTGGAGG GTGGCCCGGT CTCTGCTCAC CACCCCTCAG ATGACCAAAG GTTCACGGAC
ATGATATCCC ATGCAGACAC CCCTAGTCCC GAACCAGGCA TGACTGGACC TCTCCATTCC
AATCCACAGG GGGAAGGTGG ATTCACAGGG AGTCCACCCT TCCCCCTGGC CAACAATACC
AGTTACAGCG GCCCAATGTC CCATCCTGGT CAAGAGATGG GGGAGAACAC TGTTTGGTAGThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_571293.1 CDS 295..1494 Translation 
Target ORF information:
RefSeq Version NM_131218.1 Organism Danio rerio(zebrafish) Definition Danio rerio LIM homeobox 5 (lhx5), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_131218.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141ATGATGGTGC ACTGCGCGGG GTGTGAGAGG CCCATTCTGG ATCGGTTCCT CTTAAACGTT
CTGGACCGCG CATGGCACGC CAAGTGTGTC CAATGCTGCG AGTGTAACTG CAACCTGACC
GAAAAATGTT TCTCCAGGGA TGGAAAGCTC TATTGCAAAA TTGACTTTTT CAGGCGTTTT
GGTACGAAAT GTGCGGGCTG CTTGCAGGGA ATTTCGCCCA GCGATCTCGT GCGAAGAGCG
CGCAGCAAGG TGTTTCATCT CAACTGTTTC ACGTGCATGG TGTGCAACAA ACAGCTGTCC
ACGGGCGAGG AGCTCTACGT CATTGACGAA AACAAATTTG TGTGTAAAGA GGACTACCTG
AGCGCGAGCG CCATCAAAGA GGTCAATTTA AACTCAGTGT CGTCGTGTAC AGACCGGAGT
TTATCGCCTG ATCTTCCGGA TCAAATCCAG GACGACACGA AGGAGACGGA CAATTCCACA
TCTTCAGATA AAGACACTAA CAACAACGAA AACGAGGAGC AAAACTCGTG CACGAAACGG
CGAGGCCCGC GCACCACCAT CAAGGCCAAA CAGCTGGAGA CTCTGAAAGC CGCGTTCGTG
GCCACGCCGA AACCCACGCG ACACATCCGC GAGCAACTCG CGCAGGAGAC AGGCCTTAAC
ATGCGGGTGA TTCAGGTGTG GTTTCAAAAC CGGCGGTCTA AAGAACGTAG AATGAAGCAG
CTCAGTGCTC TCGGTGCTCG ACGACATGCT TTCTTCAGGG GACCACGAAG AATGAGGCCT
CTCGGAGGAA GACTAGAGGA CCCCGACATA ATGGGCCCTG GAGGATACAG CTACTACGGA
GAATACCAAG GTGACTATTA CGGCCCAGTG GTCAACTATG ATTTCTTCCC TCACGGACCC
CCTTCCTCAC AGGCACACTC TCCAGCTGAA TCCCCTTATC TTCTCAGCTC GGGTTCAGGA
GCCCTGGAGG GTGGCCCGGT CTCTGCTCAC CACCCCTCAG ATGACCAAAG GTTCACGGAC
ATGATATCCC ATGCAGACAC CCCTAGTCCC GAACCAGGCA TGACTGGACC TCTCCATTCC
AATCCACAGG GGGAAGGTGG ATTCACAGGG AGTCCACCCT TCCCCCTGGC CAACAATACC
AGTTACAGCG GCCCAATGTC CCATCCTGGT CAAGAGATGG GGGAGAACAC TGTTTGGTAGThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
Separate roles for Med12 and Wnt signaling in regulation of oxytocin expression.
Biology open7(3)(2018 Mar)
Spikol ED,Glasgow E
Non-nuclear Pool of Splicing Factor SFPQ Regulates Axonal Transcripts Required for Normal Motor Development.
Neuron94(2)322-336.e5(2017 Apr)
Thomas-Jinu S,Gordon PM,Fielding T,Taylor R,Smith BN,Snowden V,Blanc E,Vance C,Topp S,Wong CH,Bielen H,Williams KL,McCann EP,Nicholson GA,Pan-Vazquez A,Fox AH,Bond CS,Talbot WS,Blair IP,Shaw CE,Houart C
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J
RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R
Conserved Noncoding Sequences Regulate lhx5 Expression in the Zebrafish Forebrain.
PloS one10(7)e0132525(2015)
Sun L,Chen F,Peng G
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