copb2 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	copb2
Entrez Gene ID	114454
Full Name	coatomer protein complex, subunit beta 2
Synonyms	sb:cb121,wu:fb30f06
General protein information	Preferred Names coatomer protein complex, subunit beta 2 Names coatomer subunit beta' dop dopey
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001001940.1	NP_001001940.1	coatomer subunit beta'

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	COPB2	XP_005634562.1
Gallus gallus (chicken)	COPB2	XP_422637.2
Oryza sativa (rice)	Os06g0143900	NP_001056779.1
Bos taurus (cattle)	COPB2	NP_776706.2
Mus musculus (house mouse)	Copb2	NP_056642.1
Rattus norvegicus (Norway rat)	Copb2	NP_068533.1
Saccharomyces cerevisiae (baker's yeast)	SEC27	NP_011378.1
Arabidopsis thaliana (thale cress)	AT3G15980	NP_001189907.1
Eremothecium gossypii	AGOS_AFL118W	NP_985432.1
Schizosaccharomyces pombe (fission yeast)	sec27	XP_001713153.1
Magnaporthe oryzae (rice blast fungus)	MGG_10504	XP_003710112.1
Neurospora crassa	NCU07319	XP_962477.1
Danio rerio (zebrafish)	copb2	NP_001001940.1
Drosophila melanogaster (fruit fly)	beta'Cop	NP_524836.2
Xenopus tropicalis (tropical clawed frog)	copb2	NP_001027518.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP004798	XP_318012.4
Homo sapiens (human)	COPB2	NP_004757.1
Arabidopsis thaliana (thale cress)	AT1G52360	NP_175645.1
Arabidopsis thaliana (thale cress)	AT1G79990	NP_001154478.1
Kluyveromyces lactis	KLLA0B01958g	XP_451618.1
Pan troglodytes (chimpanzee)	COPB2	XP_003310064.1
Caenorhabditis elegans (roundworm)	CELE_F38E11.5	NP_501671.1

Gene Ontology
Bibliography

Related articles in PubMed

Sequential, Divergent, and Cooperative Requirements of
Yang YJ, Wang Y, Li Z, Zhou L, Gui JF
Genetics205(4)1551-1572(2017 04)

Evolution of complexity in the zebrafish synapse proteome.
Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 03)

Analysis of nicastrin gene phylogeny and expression in zebrafish.
Lim A, Moussavi Nik SH, Ebrahimie E, Lardelli M
Development genes and evolution225(3)171-8(2015 Jun)

Whole-genome expression profile in zebrafish embryos after chronic exposure to morphine: identification of new genes associated with neuronal function and mu opioid receptor expression.
Herrero-Turrión MJ, Rodríguez-Martín I, López-Bellido R, Rodríguez RE
BMC genomics15874(2014 Oct)

The zebrafish gene map defines ancestral vertebrate chromosomes.
Woods IG, Wilson C, Friedlander B, Chang P, Reyes DK, Nix R, Kelly PD, Chu F, Postlethwait JH, Talbot WS
Genome research15(9)1307-14(2005 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following copb2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the copb2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa36836	NM_001001940.1 Latest version!	Danio rerio COPI coat complex subunit beta 2 (copb2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

copb2 ( NM_001001940.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001001940.1 Danio rerio COPI coat complex subunit beta 2 (copb2), mRNA.

Price & Availability↑

CloneID	ODa36836
Clone ID Related Accession (Same CDS sequence)	NM_001001940.1
Accession Version	NM_001001940.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2805bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1570896000000
Organism	Danio rerio(zebrafish)
Product	coatomer subunit beta'
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY294011.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AY294011.1, BC160653.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGCCTCTGA GGCTGGACAT CAAGCGCAAA CTCACGGCTC GATCTGACCG TGTCAAAAGC 
GTAGACCTTC ATCCGTCCGA ACCATGGATG CTGGCCAGTT TGTACAATGG CAGTGTCTGT 
GTGTGGAACC ATGAAACACA AACTCTGGTT AAGACTTTTG AGGTTTGTGA CCTTCCGGTG 
AGAGCTTCCA AGTTTGTTGC CAGGAAAAAT TGGGTCATAA CTGGCGCTGA TGACATGCAA 
ATCCGAGTTT TCAACTACAA CACTCTAGAG CGAGTACACA TGTTTGAGGC CCATTCAGAT 
TATATTCGCT GCATCGCTGT GCATCCCACC CAGCCCTACA TCCTCACAAG CAGTGATGAC 
ATGTTGATAA AGCTGTGGGA CTGGGAGAAG AAATGGTCGT GCAGTCAGGT GTTTGAGGGC 
CACACACACT ACGTGATGCA AATCGTCATC AACCCCAAAG ACAACAACCA GTTTGCTAGT 
GCGTCGCTGG ACAGAACAAT AAAGGTTTGG CAACTGGGTT CATCTTCTCC CAACTTCACT 
CTGGAAGGTC ATGATAAGGG GGTGAACTGC ATTGATTATT ACAGTGGAGG AGATAAACCT 
TACCTCATCT CCGGAGCCGA TGACAGACTG GTCAAAATTT GGGACTATCA GAATAAGACA 
TGTGTGCAGA CGCTCGAGGG ACATGCTCAG AATGTGTCCT GTGTAAACTT TCACCCAGAG 
CTGCCCATCA TCATCACTGG ATCTGAGGAC GGCACAGTCC GGATCTGGCA CTCCAGCACT 
TACCGTCTAG AAAGCACCTT GAACTATGGA ATGGAGCGGG TTTGGTGTGT GTCTGGCTTG 
CGGGGCTCCA ACAGCGTCGC ATTGGGCTAT GATGAAGGCA GCATCATTAT CAAGCTCGGC 
CGTGAGGAGC CAGCCATGTC AATGGACACC AACGGAAAGA TCATTTGGGC CAAGCACTCT 
GAGATTCAGC AGGCAAACCT CAAAGCCATG GGGGATGCAG AAATCAAGGA TGGTGAGAGG 
CTGCCACTGG CAGTCAAGGA CATGGGCAGC TGTGAGATCT ACCCTCAAAC CATCCAGCAC 
AATCCTAACG GCAGGTTTGT GGTGGTGTGT GGAGATGGAG AGTACATCAT CTACACCGCC 
ATGGCTCTGA GAAACAAGAG CTTTGGTTCT GCACAGGAGT TTGTTTGGGC CCATGATTCA 
TCCGAGTATG CAATCCGGGA AAGCAGCAGT GTGGTGAAGA TCTTCAAAAA TTTTAAGGAG 
AAAAAATCTT TTAAGCCAGA TTTTGGAGCA GAAGGCATTT ATGGAGGCTT CCTACTGGGT 
GTTCGATCTG TGAATGGTTT GGCTTTCTAT GACTGGGAAA ACACGGAGCT GATTCGACGA 
ATTGAGATCC AGCCTAAACA TATTTTCTGG TCAGACTCCG GTGAGCTGGT GTGCATTGCC 
ACAGAAGAGT CCTTCTTTAT CCTGCGCTAC CTGTCAGAGA AGGTGGCCGC ATCACAGGAG 
AACAATGAGG GGGTTACTGA AGACGGTATT GAAGATGCTT TTGAGGTTCT GGGAGAGATT 
CAGGAGGTGG TGAAGACTGG TCTGTGGGTG GGAGATTGTT TCATCTACAC CAGCTCAGTC 
AACCGCCTCA ACTACTTTGT TGGAGGAGAG ATTGTCACCA TTGCTCACTT GGACAGAACG 
ATGTACCTTC TGGGATACAT TCCTAAAGAT GACCGTCTTT ACCTGGGTGA TAAGGAGCTG 
AACATTGTTA GTTATTCTCT CCTGGTGTCT GTCCTGGAGT ACCAAACTGC CGTCATGCGC 
AGAGACTTTG GCATGGCAGA TAAAGTGCTG CCCACCATCC CTAAAGAACA GAGAACCAGA 
GTTGCCCACT TCTTAGAGAA ACAGGGTTTC AAGCAGCAGG CTCTGGCTGT GTCCACTGAT 
CCAGAGCACC GCTTTGAGCT GGCGCTTCAG TTAGGAGAGC TGAAAATCGC ATACCAGCTT 
GCAGTAGAAG CTGAGTCGGA GCAGAAGTGG AAGCAGTTGG CAGAGCTGGC CATCAGTAAG 
TGCCAGTTTG GACTGGCACA GGAGTGTCTT CATCATGCCC AGGACTATGG AGGTCTTCTG 
CTTCTGGCCA CTGCATCTGG CAACGCCTCT ATGGTTGCCA AGCTTGCGGA GGGAGCAGAG 
CGGGACGGCA AAAACAATGT CGCCTTTATG ACATACTTCC TGCAGGGAAA ATTGGACAAC 
TGTTTGGAAC TTCTGATCAA GACCAATCGT CTGCCAGAAG CAGCCTTTCT TGCCCGCACA 
TATCTACCCA GTCAAGTTTC CAGGGTGGTG AAGCTTTGGA GAGAGAGTTT GTCTAAAGTG 
AATCAGAAAG CAGCAGAGTC TCTGGCAGAC CCCACAGAGT ATGAGAACCT GTTCCCAGGC 
CTGAGAGAGG CTTTTGTGGC AGAGCAGTAC CTGAAAGAGA CCAGCCTCGG CCAAACCAGA 
CCTGCCTCTG ACTACCCACT CATCACGCCT AATGAAGAAA GGAACGTGCT GGAGGAGGCC 
AGTGGTTATG AACCCAAAGG AATTCTCCCT GCTCCCACAC AGCTGAAGCA GGAGGTCTCG 
GAGGATGAAG AGGTTTTGGC CTCAGTCTCA TCGGTGTCTG CTGTGAGTTC TGCACAGTCC 
CAACCTGACC CGAAGCTCCA AGAGAAGACA GAAGAAAAAA CTCCTGAAAT TACAGCAGCA 
GAACAGAAGG TCATCGATGA ACTTGAGGAT GATTTGGATA ACATGGAGTT TGATGACATC 
GACACCACAG ACGTCAATCT GGATGACGGC TACGTAGACG ACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001001940.1
CDS	79..2883
Translation	MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNSVALGYDEGSIIIKLGREEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFKNFKEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIATEESFFILRYLSEKVAASQENNEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSVNRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVAKLAEGAERDGKNNVAFMTYFLQGKLDNCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKVNQKAAESLADPTEYENLFPGLREAFVAEQYLKETSLGQTRPASDYPLITPNEERNVLEEASGYEPKGILPAPTQLKQEVSEDEEVLASVSSVSAVSSAQSQPDPKLQEKTEEKTPEITAAEQKVIDELEDDLDNMEFDDIDTTDVNLDDGYVDD

Target ORF information:

RefSeq Version	NM_001001940.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio COPI coat complex subunit beta 2 (copb2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001001940.1

ORF Insert Sequence:

ATGCCTCTGA GGCTGGACAT CAAGCGCAAA CTCACGGCTC GATCTGACCG TGTCAAAAGC 
GTAGACCTTC ATCCGTCCGA ACCATGGATG CTGGCCAGTT TGTACAATGG CAGTGTCTGT 
GTGTGGAACC ATGAAACACA AACTCTGGTT AAGACTTTTG AGGTTTGTGA CCTTCCGGTG 
AGAGCTTCCA AGTTTGTTGC CAGGAAAAAT TGGGTCATAA CTGGCGCTGA TGACATGCAA 
ATCCGAGTTT TCAACTACAA CACTCTAGAG CGAGTACACA TGTTTGAGGC CCATTCAGAT 
TATATTCGCT GCATCGCTGT GCATCCCACC CAGCCCTACA TCCTCACAAG CAGTGATGAC 
ATGTTGATAA AGCTGTGGGA CTGGGAGAAG AAATGGTCGT GCAGTCAGGT GTTTGAGGGC 
CACACACACT ACGTGATGCA AATCGTCATC AACCCCAAAG ACAACAACCA GTTTGCTAGT 
GCGTCGCTGG ACAGAACAAT AAAGGTTTGG CAACTGGGTT CATCTTCTCC CAACTTCACT 
CTGGAAGGTC ATGATAAGGG GGTGAACTGC ATTGATTATT ACAGTGGAGG AGATAAACCT 
TACCTCATCT CCGGAGCCGA TGACAGACTG GTCAAAATTT GGGACTATCA GAATAAGACA 
TGTGTGCAGA CGCTCGAGGG ACATGCTCAG AATGTGTCCT GTGTAAACTT TCACCCAGAG 
CTGCCCATCA TCATCACTGG ATCTGAGGAC GGCACAGTCC GGATCTGGCA CTCCAGCACT 
TACCGTCTAG AAAGCACCTT GAACTATGGA ATGGAGCGGG TTTGGTGTGT GTCTGGCTTG 
CGGGGCTCCA ACAGCGTCGC ATTGGGCTAT GATGAAGGCA GCATCATTAT CAAGCTCGGC 
CGTGAGGAGC CAGCCATGTC AATGGACACC AACGGAAAGA TCATTTGGGC CAAGCACTCT 
GAGATTCAGC AGGCAAACCT CAAAGCCATG GGGGATGCAG AAATCAAGGA TGGTGAGAGG 
CTGCCACTGG CAGTCAAGGA CATGGGCAGC TGTGAGATCT ACCCTCAAAC CATCCAGCAC 
AATCCTAACG GCAGGTTTGT GGTGGTGTGT GGAGATGGAG AGTACATCAT CTACACCGCC 
ATGGCTCTGA GAAACAAGAG CTTTGGTTCT GCACAGGAGT TTGTTTGGGC CCATGATTCA 
TCCGAGTATG CAATCCGGGA AAGCAGCAGT GTGGTGAAGA TCTTCAAAAA TTTTAAGGAG 
AAAAAATCTT TTAAGCCAGA TTTTGGAGCA GAAGGCATTT ATGGAGGCTT CCTACTGGGT 
GTTCGATCTG TGAATGGTTT GGCTTTCTAT GACTGGGAAA ACACGGAGCT GATTCGACGA 
ATTGAGATCC AGCCTAAACA TATTTTCTGG TCAGACTCCG GTGAGCTGGT GTGCATTGCC 
ACAGAAGAGT CCTTCTTTAT CCTGCGCTAC CTGTCAGAGA AGGTGGCCGC ATCACAGGAG 
AACAATGAGG GGGTTACTGA AGACGGTATT GAAGATGCTT TTGAGGTTCT GGGAGAGATT 
CAGGAGGTGG TGAAGACTGG TCTGTGGGTG GGAGATTGTT TCATCTACAC CAGCTCAGTC 
AACCGCCTCA ACTACTTTGT TGGAGGAGAG ATTGTCACCA TTGCTCACTT GGACAGAACG 
ATGTACCTTC TGGGATACAT TCCTAAAGAT GACCGTCTTT ACCTGGGTGA TAAGGAGCTG 
AACATTGTTA GTTATTCTCT CCTGGTGTCT GTCCTGGAGT ACCAAACTGC CGTCATGCGC 
AGAGACTTTG GCATGGCAGA TAAAGTGCTG CCCACCATCC CTAAAGAACA GAGAACCAGA 
GTTGCCCACT TCTTAGAGAA ACAGGGTTTC AAGCAGCAGG CTCTGGCTGT GTCCACTGAT 
CCAGAGCACC GCTTTGAGCT GGCGCTTCAG TTAGGAGAGC TGAAAATCGC ATACCAGCTT 
GCAGTAGAAG CTGAGTCGGA GCAGAAGTGG AAGCAGTTGG CAGAGCTGGC CATCAGTAAG 
TGCCAGTTTG GACTGGCACA GGAGTGTCTT CATCATGCCC AGGACTATGG AGGTCTTCTG 
CTTCTGGCCA CTGCATCTGG CAACGCCTCT ATGGTTGCCA AGCTTGCGGA GGGAGCAGAG 
CGGGACGGCA AAAACAATGT CGCCTTTATG ACATACTTCC TGCAGGGAAA ATTGGACAAC 
TGTTTGGAAC TTCTGATCAA GACCAATCGT CTGCCAGAAG CAGCCTTTCT TGCCCGCACA 
TATCTACCCA GTCAAGTTTC CAGGGTGGTG AAGCTTTGGA GAGAGAGTTT GTCTAAAGTG 
AATCAGAAAG CAGCAGAGTC TCTGGCAGAC CCCACAGAGT ATGAGAACCT GTTCCCAGGC 
CTGAGAGAGG CTTTTGTGGC AGAGCAGTAC CTGAAAGAGA CCAGCCTCGG CCAAACCAGA 
CCTGCCTCTG ACTACCCACT CATCACGCCT AATGAAGAAA GGAACGTGCT GGAGGAGGCC 
AGTGGTTATG AACCCAAAGG AATTCTCCCT GCTCCCACAC AGCTGAAGCA GGAGGTCTCG 
GAGGATGAAG AGGTTTTGGC CTCAGTCTCA TCGGTGTCTG CTGTGAGTTC TGCACAGTCC 
CAACCTGACC CGAAGCTCCA AGAGAAGACA GAAGAAAAAA CTCCTGAAAT TACAGCAGCA 
GAACAGAAGG TCATCGATGA ACTTGAGGAT GATTTGGATA ACATGGAGTT TGATGACATC 
GACACCACAG ACGTCAATCT GGATGACGGC TACGTAGACG ACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequential, Divergent, and Cooperative Requirements of
Genetics205(4)1551-1572(2017 04)
Yang YJ,Wang Y,Li Z,Zhou L,Gui JF

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 03)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Analysis of nicastrin gene phylogeny and expression in zebrafish.
Development genes and evolution225(3)171-8(2015 Jun)
Lim A,Moussavi Nik SH,Ebrahimie E,Lardelli M

Whole-genome expression profile in zebrafish embryos after chronic exposure to morphine: identification of new genes associated with neuronal function and mu opioid receptor expression.
BMC genomics15874(2014 Oct)
Herrero-Turrión MJ,Rodríguez-Martín I,López-Bellido R,Rodríguez RE

The zebrafish gene map defines ancestral vertebrate chromosomes.
Genome research15(9)1307-14(2005 Sep)
Woods IG,Wilson C,Friedlander B,Chang P,Reyes DK,Nix R,Kelly PD,Chu F,Postlethwait JH,Talbot WS

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copb2 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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