SHQ1 cDNA ORF clone, Physeter catodon(sperm whale)

The following SHQ1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SHQ1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPh114720 XM_007104931.1
Latest version!
Physeter catodon SHQ1, H/ACA ribonucleoprotein assembly factor (SHQ1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPh292666 XM_007104931.3
Latest version!
Physeter catodon SHQ1, H/ACA ribonucleoprotein assembly factor (SHQ1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OPh292666 XM_007104931.2 Physeter catodon SHQ1, H/ACA ribonucleoprotein assembly factor (SHQ1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPh114720
    Clone ID Related Accession (Same CDS sequence) XM_007104931.1
    Accession Version XM_007104931.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1734bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1394380800000
    Organism Physeter catodon(sperm whale)
    Product LOW QUALITY PROTEIN: protein SHQ1 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006713207.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Physeter catodon Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 5.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGACCC CGGCGTTCGA CCTTAGCCAG GACCCCGACT TCCTGACTGT CGCCATCCGC 
    GTGCCCTACG CCCGGGTCTC CGAGTTCGAC GTCTACTTCG AGGGGGTCGA CTTCAAGTTC
    TACGCCAAGC CGTACTTTCT CAGATTAACC CTTCCTGGAA GAATTGTAGA AAATGGAAGC
    GAGCAGGGAT CCTATGCTGC AGATAAAGGA ATTTTTACCA TTCGATTGCC CAAAGAAACT
    CCTGGCCAGC ATTTTGAAGG GCTGAACATG TTAACTGCTC TACTGGCACC AAGAAAATCC
    AGGACTGCAA AACCACTTGT GGAAGAAATA GGTGCTTCTG AGGTTTCTGA GGAAGGAGTA
    GAAGATGATG ATGAAGAGTT TGATTGGGAA ATTGAACAGT CCCCCTATGA AGAGGTACCA
    GAAAGTACTC TGAATCCAGA GTGCCGCTAT GGGTTTGGAA ACTTACGCTC AGGAGTGTTT
    CAGCGGTTAC AGGATGAATT GAGTGATGTT ATCGATCTTA AGGATCCAGA TTTCACCCCT
    GCAGCCGAAC GAAGGCAGAA ACGCCTGGCT GCTGAGCTGG CCAAGTTTGA TCCTGATCAT
    TATCTAGCTG ACTTTTTTGA AGATGAGGCA GTTAAACAGG TTTTGGAGTA TAATCCTTGG
    TGGATTGATC TGTATTCAAA AATGATGGCT TCTTTGGGAA AGAGTCAGGA ACAAGAAAAT
    CTTGCTGCGT TAGTGTCTTT TTCTGAAGAA GAGAAATATC AGCTGCGAAA ATTTGTCAAT
    AAATCTTACC TGCTGGACAA GAGAGCCTGT CGTCAAGTGT ACTACAGTTT GATTGATATC
    CTTCTGGCGT ATTGCTATGA AACTCGTGTC ACCGAAGGAG AGAAGAATGT TGAATCCGCA
    TGGAATATCA GAAAACTGAG TCCAACCCTC TGCTGGTTTG AGACTTGGAC TAATGTTCAT
    GAAATCCTGG TGTCTTTTGG AAGAAGAGTT TTGTGCTATC CACTTTACCG CCATTTCAAG
    CTGGTGATGC AGGCCTACAG AGACACTATA AAGATGTTGC AACTAGGTAA AAGTGCAGTT
    TTAAAGTGTC TACTGGACAT TCACAAAATT TTTCAGGAAA ATGACCCAGC TTACATTCTA
    AACGATCTCT ACATCTCAGA CTACTGTGTG TGGATTCAGA AAGCCAAGTC CAGAAAGTTG
    GCAGCTCTTG CGGAAGCCTT AAAGAAAGCA TTCCCGACCA AGGCCCAGCT GGGGTTGGAA
    CTGCAGGAAC TGGAAGCAGC GGCACTCTTG GTCCAGGAGG AAGAAGCTGC ATCGAAAGCA
    GGAGCCCGAT GCATTTCTGG GCAGCAGACG CCTTCCTCCA GCTCTGAGGC AAGCGATTCG
    GAGGAATCAG AGAGCAGCAC ATCATCTGAG ACCGAGGACT CAGACTCGGA ACACGAGGAG
    CCCAGAAGTG GTGAATGTGA GGCAGGGCCT TCCTTGCTCG GTCCCTTTGT TGAGGAAAGC
    GGCACGGCCC TGCTTCCTGA CCATGGTGGG ATGTGCAGAA GCGTGGTCCT CCCAGGGTCT
    GATGATGGTC AGGGACAGCC GCTCGCCTCT CCCCAGGCTC CTGGGGTATC TGAGCCTCTA
    ATCCAGGAGC TTGGAGAACA ACTGGAGACT TCGGTTCAGA TTTCTGAGCC CAAGAGCTCT
    GCTGCTGGAC AGNNCGTGCT GAAGAGAGAC AGCCGGCAGA CATCCAAGAA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_007104993.1
    CDS114..1847
    Translation

    Target ORF information:

    RefSeq Version XM_007104931.1
    Organism Physeter catodon(sperm whale)
    Definition Physeter catodon SHQ1, H/ACA ribonucleoprotein assembly factor (SHQ1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_007104931.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGACCC CGGCGTTCGA CCTTAGCCAG GACCCCGACT TCCTGACTGT CGCCATCCGC 
    GTGCCCTACG CCCGGGTCTC CGAGTTCGAC GTCTACTTCG AGGGGGTCGA CTTCAAGTTC
    TACGCCAAGC CGTACTTTCT CAGATTAACC CTTCCTGGAA GAATTGTAGA AAATGGAAGC
    GAGCAGGGAT CCTATGCTGC AGATAAAGGA ATTTTTACCA TTCGATTGCC CAAAGAAACT
    CCTGGCCAGC ATTTTGAAGG GCTGAACATG TTAACTGCTC TACTGGCACC AAGAAAATCC
    AGGACTGCAA AACCACTTGT GGAAGAAATA GGTGCTTCTG AGGTTTCTGA GGAAGGAGTA
    GAAGATGATG ATGAAGAGTT TGATTGGGAA ATTGAACAGT CCCCCTATGA AGAGGTACCA
    GAAAGTACTC TGAATCCAGA GTGCCGCTAT GGGTTTGGAA ACTTACGCTC AGGAGTGTTT
    CAGCGGTTAC AGGATGAATT GAGTGATGTT ATCGATCTTA AGGATCCAGA TTTCACCCCT
    GCAGCCGAAC GAAGGCAGAA ACGCCTGGCT GCTGAGCTGG CCAAGTTTGA TCCTGATCAT
    TATCTAGCTG ACTTTTTTGA AGATGAGGCA GTTAAACAGG TTTTGGAGTA TAATCCTTGG
    TGGATTGATC TGTATTCAAA AATGATGGCT TCTTTGGGAA AGAGTCAGGA ACAAGAAAAT
    CTTGCTGCGT TAGTGTCTTT TTCTGAAGAA GAGAAATATC AGCTGCGAAA ATTTGTCAAT
    AAATCTTACC TGCTGGACAA GAGAGCCTGT CGTCAAGTGT ACTACAGTTT GATTGATATC
    CTTCTGGCGT ATTGCTATGA AACTCGTGTC ACCGAAGGAG AGAAGAATGT TGAATCCGCA
    TGGAATATCA GAAAACTGAG TCCAACCCTC TGCTGGTTTG AGACTTGGAC TAATGTTCAT
    GAAATCCTGG TGTCTTTTGG AAGAAGAGTT TTGTGCTATC CACTTTACCG CCATTTCAAG
    CTGGTGATGC AGGCCTACAG AGACACTATA AAGATGTTGC AACTAGGTAA AAGTGCAGTT
    TTAAAGTGTC TACTGGACAT TCACAAAATT TTTCAGGAAA ATGACCCAGC TTACATTCTA
    AACGATCTCT ACATCTCAGA CTACTGTGTG TGGATTCAGA AAGCCAAGTC CAGAAAGTTG
    GCAGCTCTTG CGGAAGCCTT AAAGAAAGCA TTCCCGACCA AGGCCCAGCT GGGGTTGGAA
    CTGCAGGAAC TGGAAGCAGC GGCACTCTTG GTCCAGGAGG AAGAAGCTGC ATCGAAAGCA
    GGAGCCCGAT GCATTTCTGG GCAGCAGACG CCTTCCTCCA GCTCTGAGGC AAGCGATTCG
    GAGGAATCAG AGAGCAGCAC ATCATCTGAG ACCGAGGACT CAGACTCGGA ACACGAGGAG
    CCCAGAAGTG GTGAATGTGA GGCAGGGCCT TCCTTGCTCG GTCCCTTTGT TGAGGAAAGC
    GGCACGGCCC TGCTTCCTGA CCATGGTGGG ATGTGCAGAA GCGTGGTCCT CCCAGGGTCT
    GATGATGGTC AGGGACAGCC GCTCGCCTCT CCCCAGGCTC CTGGGGTATC TGAGCCTCTA
    ATCCAGGAGC TTGGAGAACA ACTGGAGACT TCGGTTCAGA TTTCTGAGCC CAAGAGCTCT
    GCTGCTGGAC AGNNCGTGCT GAAGAGAGAC AGCCGGCAGA CATCCAAGAA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPh292666
    Clone ID Related Accession (Same CDS sequence) XM_007104931.3 , XM_007104931.2
    Accession Version XM_007104931.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1734bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1553011200000
    Organism Physeter catodon(sperm whale)
    Product LOW QUALITY PROTEIN: protein SHQ1 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041231.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2019 this sequence version replaced XM_007104931.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Physeter catodon Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGACCC CGGCGTTCGA CCTTAGCCAG GACCCCGACT TCCTGACTGT CGCCATCCGC 
    GTGCCCTACG CCCGGGTCTC CGAGTTCGAC GTCTACTTCG AGGGGGTCGA CTTCAAGTTC
    TACGCCAAGC CGTACTTTCT CAGATTAACC CTTCCTGGAA GAATTGTAGA AAATGGAAGC
    GAGCAGGGAT CCTATGCTGC AGATAAAGGA ATTTTTACCA TTCGATTGCC CAAAGAAACT
    CCTGGCCAGC ATTTTGAAGG GCTGAACATG TTAACTGCTC TACTGGCACC AAGAAAATCC
    AGGACTGCAA AACCACTTGT GGAAGAAATA GGTGCTTCTG AGGTTTCTGA GGAAGGAGTA
    GAAGATGATG ATGAAGAGTT TGATTGGGAA ATTGAACAGT CCCCCTATGA AGAGGTACCA
    GAAAGTACTC TGAATCCGGA GTGCCGCTAT GGGTTTGGAA ACTTACGCTC AGGAGTGTTT
    CAGCGGTTAC AGGATGAATT GAGTGATGTT ATCGATCTTA AGGATCCAGA TTTCACCCCT
    GCAGCCGAAC GAAGGCAGAA ACGCCTGGCT GCTGAGCTGG CCAAGTTTGA TCCTGATCAT
    TATCTAGCTG ACTTTTTTGA AGATGAGGCA GTTAAACAGG TTTTGGAGTA TAATCCTTGG
    TGGATTGATC TGTATTCAAA AATGATGGCT TCTTTGGGAA AGAGTCAGGA ACAAGAAAAT
    CTTGCTGCGT TAGTGTCTTT TTCTGAAGAA GAGAAATATC AGCTGCGAAA ATTTGTCAAT
    AAATCTTACC TGCTGGACAA GAGAGCCTGT CGTCAAGTGT ACTACAGTTT GATTGATATC
    CTTCTGGCGT ATTGCTATGA AACTCGTGTC ACCGAAGGAG AGAAGAATGT TGAATCCGCA
    TGGAATATCA GAAAACTGAG TCCAACCCTC TGCTGGTTTG AGACTTGGAC TAATGTTCAT
    GAAATCCTGG TGTCTTTTGG AAGAAGAGTT TTGTGCTATC CACTTTACCG CCATTTCAAG
    CTGGTGATGC AGGCCTACAG AGACACTATA AAGATGTTGC AACTAGGTAA AAGTGCAGTT
    TTAAAGTGTC TACTGGACAT TCACAAAATT TTTCAGGAAA ATGACCCAGC TTACATTCTA
    AACGATCTCT ACATCTCAGA CTACTGTGTG TGGATTCAGA AAGCCAAGTC CAGAAAGTTG
    GCAGCTCTTG CGGAAGCCTT AAAGAAAGCA TTCCCGACCA AGGCCCAGCT GGGGTTGGAA
    CTGCAGGAAC TGGAAGCAGC GGCACTCTTG GTCCAGGAGG AAGAAGCTGC ATCGAAAGCA
    GGAGCCCGAT GCATTTCTGG GCAGCAGACG CCTTCCTCCA GCTCTGAGGC AAGCGATTCG
    GAGGAATCAG AGAGCAGCAC ATCATCTGAG ACCGAGGACT CAGACTCGGA ACACGAGGAG
    CCCAGAAGTG GTGAATGTGA GGCAGGGCCT TCCTTGCTCG GTCCCTTTGT TGAGGAAAGC
    GGCACGGCCC TGCTTCCTGA CCATGGTGGG ATGTGCAGAA GCGTGGTCCT CCCAGGGTCT
    GATGATGGTC AGGGACAGCC GCTCGCCTCT CCCCAGGCTC CTGGGGTATC TGAGCCTCTA
    ATCCAGGAGC TTGGAGAACA ACTGGAGACT TCGGTTCAGA TTTCTGAGCC CAAGAGCTCT
    GCTGCTGGAC AGNNCGTGCT GAAGAGAGAC AGCCGGCAGA CATCCAAGAA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_007104993.1
    CDS114..1847
    Translation

    Target ORF information:

    RefSeq Version XM_007104931.3
    Organism Physeter catodon(sperm whale)
    Definition Physeter catodon SHQ1, H/ACA ribonucleoprotein assembly factor (SHQ1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_007104931.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGACCC CGGCGTTCGA CCTTAGCCAG GACCCCGACT TCCTGACTGT CGCCATCCGC 
    GTGCCCTACG CCCGGGTCTC CGAGTTCGAC GTCTACTTCG AGGGGGTCGA CTTCAAGTTC
    TACGCCAAGC CGTACTTTCT CAGATTAACC CTTCCTGGAA GAATTGTAGA AAATGGAAGC
    GAGCAGGGAT CCTATGCTGC AGATAAAGGA ATTTTTACCA TTCGATTGCC CAAAGAAACT
    CCTGGCCAGC ATTTTGAAGG GCTGAACATG TTAACTGCTC TACTGGCACC AAGAAAATCC
    AGGACTGCAA AACCACTTGT GGAAGAAATA GGTGCTTCTG AGGTTTCTGA GGAAGGAGTA
    GAAGATGATG ATGAAGAGTT TGATTGGGAA ATTGAACAGT CCCCCTATGA AGAGGTACCA
    GAAAGTACTC TGAATCCGGA GTGCCGCTAT GGGTTTGGAA ACTTACGCTC AGGAGTGTTT
    CAGCGGTTAC AGGATGAATT GAGTGATGTT ATCGATCTTA AGGATCCAGA TTTCACCCCT
    GCAGCCGAAC GAAGGCAGAA ACGCCTGGCT GCTGAGCTGG CCAAGTTTGA TCCTGATCAT
    TATCTAGCTG ACTTTTTTGA AGATGAGGCA GTTAAACAGG TTTTGGAGTA TAATCCTTGG
    TGGATTGATC TGTATTCAAA AATGATGGCT TCTTTGGGAA AGAGTCAGGA ACAAGAAAAT
    CTTGCTGCGT TAGTGTCTTT TTCTGAAGAA GAGAAATATC AGCTGCGAAA ATTTGTCAAT
    AAATCTTACC TGCTGGACAA GAGAGCCTGT CGTCAAGTGT ACTACAGTTT GATTGATATC
    CTTCTGGCGT ATTGCTATGA AACTCGTGTC ACCGAAGGAG AGAAGAATGT TGAATCCGCA
    TGGAATATCA GAAAACTGAG TCCAACCCTC TGCTGGTTTG AGACTTGGAC TAATGTTCAT
    GAAATCCTGG TGTCTTTTGG AAGAAGAGTT TTGTGCTATC CACTTTACCG CCATTTCAAG
    CTGGTGATGC AGGCCTACAG AGACACTATA AAGATGTTGC AACTAGGTAA AAGTGCAGTT
    TTAAAGTGTC TACTGGACAT TCACAAAATT TTTCAGGAAA ATGACCCAGC TTACATTCTA
    AACGATCTCT ACATCTCAGA CTACTGTGTG TGGATTCAGA AAGCCAAGTC CAGAAAGTTG
    GCAGCTCTTG CGGAAGCCTT AAAGAAAGCA TTCCCGACCA AGGCCCAGCT GGGGTTGGAA
    CTGCAGGAAC TGGAAGCAGC GGCACTCTTG GTCCAGGAGG AAGAAGCTGC ATCGAAAGCA
    GGAGCCCGAT GCATTTCTGG GCAGCAGACG CCTTCCTCCA GCTCTGAGGC AAGCGATTCG
    GAGGAATCAG AGAGCAGCAC ATCATCTGAG ACCGAGGACT CAGACTCGGA ACACGAGGAG
    CCCAGAAGTG GTGAATGTGA GGCAGGGCCT TCCTTGCTCG GTCCCTTTGT TGAGGAAAGC
    GGCACGGCCC TGCTTCCTGA CCATGGTGGG ATGTGCAGAA GCGTGGTCCT CCCAGGGTCT
    GATGATGGTC AGGGACAGCC GCTCGCCTCT CCCCAGGCTC CTGGGGTATC TGAGCCTCTA
    ATCCAGGAGC TTGGAGAACA ACTGGAGACT TCGGTTCAGA TTTCTGAGCC CAAGAGCTCT
    GCTGCTGGAC AGNNCGTGCT GAAGAGAGAC AGCCGGCAGA CATCCAAGAA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPh292666
    Clone ID Related Accession (Same CDS sequence) XM_007104931.3 , XM_007104931.2
    Accession Version XM_007104931.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1734bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1519228800000
    Organism Physeter catodon(sperm whale)
    Product LOW QUALITY PROTEIN: protein SHQ1 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019873563.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 23, 2018 this sequence version replaced XM_007104931.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Physeter catodon Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGACCC CGGCGTTCGA CCTTAGCCAG GACCCCGACT TCCTGACTGT CGCCATCCGC 
    GTGCCCTACG CCCGGGTCTC CGAGTTCGAC GTCTACTTCG AGGGGGTCGA CTTCAAGTTC
    TACGCCAAGC CGTACTTTCT CAGATTAACC CTTCCTGGAA GAATTGTAGA AAATGGAAGC
    GAGCAGGGAT CCTATGCTGC AGATAAAGGA ATTTTTACCA TTCGATTGCC CAAAGAAACT
    CCTGGCCAGC ATTTTGAAGG GCTGAACATG TTAACTGCTC TACTGGCACC AAGAAAATCC
    AGGACTGCAA AACCACTTGT GGAAGAAATA GGTGCTTCTG AGGTTTCTGA GGAAGGAGTA
    GAAGATGATG ATGAAGAGTT TGATTGGGAA ATTGAACAGT CCCCCTATGA AGAGGTACCA
    GAAAGTACTC TGAATCCGGA GTGCCGCTAT GGGTTTGGAA ACTTACGCTC AGGAGTGTTT
    CAGCGGTTAC AGGATGAATT GAGTGATGTT ATCGATCTTA AGGATCCAGA TTTCACCCCT
    GCAGCCGAAC GAAGGCAGAA ACGCCTGGCT GCTGAGCTGG CCAAGTTTGA TCCTGATCAT
    TATCTAGCTG ACTTTTTTGA AGATGAGGCA GTTAAACAGG TTTTGGAGTA TAATCCTTGG
    TGGATTGATC TGTATTCAAA AATGATGGCT TCTTTGGGAA AGAGTCAGGA ACAAGAAAAT
    CTTGCTGCGT TAGTGTCTTT TTCTGAAGAA GAGAAATATC AGCTGCGAAA ATTTGTCAAT
    AAATCTTACC TGCTGGACAA GAGAGCCTGT CGTCAAGTGT ACTACAGTTT GATTGATATC
    CTTCTGGCGT ATTGCTATGA AACTCGTGTC ACCGAAGGAG AGAAGAATGT TGAATCCGCA
    TGGAATATCA GAAAACTGAG TCCAACCCTC TGCTGGTTTG AGACTTGGAC TAATGTTCAT
    GAAATCCTGG TGTCTTTTGG AAGAAGAGTT TTGTGCTATC CACTTTACCG CCATTTCAAG
    CTGGTGATGC AGGCCTACAG AGACACTATA AAGATGTTGC AACTAGGTAA AAGTGCAGTT
    TTAAAGTGTC TACTGGACAT TCACAAAATT TTTCAGGAAA ATGACCCAGC TTACATTCTA
    AACGATCTCT ACATCTCAGA CTACTGTGTG TGGATTCAGA AAGCCAAGTC CAGAAAGTTG
    GCAGCTCTTG CGGAAGCCTT AAAGAAAGCA TTCCCGACCA AGGCCCAGCT GGGGTTGGAA
    CTGCAGGAAC TGGAAGCAGC GGCACTCTTG GTCCAGGAGG AAGAAGCTGC ATCGAAAGCA
    GGAGCCCGAT GCATTTCTGG GCAGCAGACG CCTTCCTCCA GCTCTGAGGC AAGCGATTCG
    GAGGAATCAG AGAGCAGCAC ATCATCTGAG ACCGAGGACT CAGACTCGGA ACACGAGGAG
    CCCAGAAGTG GTGAATGTGA GGCAGGGCCT TCCTTGCTCG GTCCCTTTGT TGAGGAAAGC
    GGCACGGCCC TGCTTCCTGA CCATGGTGGG ATGTGCAGAA GCGTGGTCCT CCCAGGGTCT
    GATGATGGTC AGGGACAGCC GCTCGCCTCT CCCCAGGCTC CTGGGGTATC TGAGCCTCTA
    ATCCAGGAGC TTGGAGAACA ACTGGAGACT TCGGTTCAGA TTTCTGAGCC CAAGAGCTCT
    GCTGCTGGAC AGNNCGTGCT GAAGAGAGAC AGCCGGCAGA CATCCAAGAA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_007104993.1
    CDS114..1847
    Translation

    Target ORF information:

    RefSeq Version XM_007104931.2
    Organism Physeter catodon(sperm whale)
    Definition Physeter catodon SHQ1, H/ACA ribonucleoprotein assembly factor (SHQ1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_007104931.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTGACCC CGGCGTTCGA CCTTAGCCAG GACCCCGACT TCCTGACTGT CGCCATCCGC 
    GTGCCCTACG CCCGGGTCTC CGAGTTCGAC GTCTACTTCG AGGGGGTCGA CTTCAAGTTC
    TACGCCAAGC CGTACTTTCT CAGATTAACC CTTCCTGGAA GAATTGTAGA AAATGGAAGC
    GAGCAGGGAT CCTATGCTGC AGATAAAGGA ATTTTTACCA TTCGATTGCC CAAAGAAACT
    CCTGGCCAGC ATTTTGAAGG GCTGAACATG TTAACTGCTC TACTGGCACC AAGAAAATCC
    AGGACTGCAA AACCACTTGT GGAAGAAATA GGTGCTTCTG AGGTTTCTGA GGAAGGAGTA
    GAAGATGATG ATGAAGAGTT TGATTGGGAA ATTGAACAGT CCCCCTATGA AGAGGTACCA
    GAAAGTACTC TGAATCCGGA GTGCCGCTAT GGGTTTGGAA ACTTACGCTC AGGAGTGTTT
    CAGCGGTTAC AGGATGAATT GAGTGATGTT ATCGATCTTA AGGATCCAGA TTTCACCCCT
    GCAGCCGAAC GAAGGCAGAA ACGCCTGGCT GCTGAGCTGG CCAAGTTTGA TCCTGATCAT
    TATCTAGCTG ACTTTTTTGA AGATGAGGCA GTTAAACAGG TTTTGGAGTA TAATCCTTGG
    TGGATTGATC TGTATTCAAA AATGATGGCT TCTTTGGGAA AGAGTCAGGA ACAAGAAAAT
    CTTGCTGCGT TAGTGTCTTT TTCTGAAGAA GAGAAATATC AGCTGCGAAA ATTTGTCAAT
    AAATCTTACC TGCTGGACAA GAGAGCCTGT CGTCAAGTGT ACTACAGTTT GATTGATATC
    CTTCTGGCGT ATTGCTATGA AACTCGTGTC ACCGAAGGAG AGAAGAATGT TGAATCCGCA
    TGGAATATCA GAAAACTGAG TCCAACCCTC TGCTGGTTTG AGACTTGGAC TAATGTTCAT
    GAAATCCTGG TGTCTTTTGG AAGAAGAGTT TTGTGCTATC CACTTTACCG CCATTTCAAG
    CTGGTGATGC AGGCCTACAG AGACACTATA AAGATGTTGC AACTAGGTAA AAGTGCAGTT
    TTAAAGTGTC TACTGGACAT TCACAAAATT TTTCAGGAAA ATGACCCAGC TTACATTCTA
    AACGATCTCT ACATCTCAGA CTACTGTGTG TGGATTCAGA AAGCCAAGTC CAGAAAGTTG
    GCAGCTCTTG CGGAAGCCTT AAAGAAAGCA TTCCCGACCA AGGCCCAGCT GGGGTTGGAA
    CTGCAGGAAC TGGAAGCAGC GGCACTCTTG GTCCAGGAGG AAGAAGCTGC ATCGAAAGCA
    GGAGCCCGAT GCATTTCTGG GCAGCAGACG CCTTCCTCCA GCTCTGAGGC AAGCGATTCG
    GAGGAATCAG AGAGCAGCAC ATCATCTGAG ACCGAGGACT CAGACTCGGA ACACGAGGAG
    CCCAGAAGTG GTGAATGTGA GGCAGGGCCT TCCTTGCTCG GTCCCTTTGT TGAGGAAAGC
    GGCACGGCCC TGCTTCCTGA CCATGGTGGG ATGTGCAGAA GCGTGGTCCT CCCAGGGTCT
    GATGATGGTC AGGGACAGCC GCTCGCCTCT CCCCAGGCTC CTGGGGTATC TGAGCCTCTA
    ATCCAGGAGC TTGGAGAACA ACTGGAGACT TCGGTTCAGA TTTCTGAGCC CAAGAGCTCT
    GCTGCTGGAC AGNNCGTGCT GAAGAGAGAC AGCCGGCAGA CATCCAAGAA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.