TAPBP cDNA ORF clone, Gallus gallus(chicken)

Gene
Clones
gRNAs

Summary

Gene Symbol	TAPBP
Entrez Gene ID	417048
Full Name	TAP binding protein
Synonyms	TPN,TPSN
General protein information	Preferred Names TAP binding protein Names tapasin TAP-associated protein putative tapasin
Gene Type	protein-coding
Organism	Gallus gallus(chicken)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001206611.2	NP_001193540.1	tapasin isoform 2 precursor
NM_001034816.3	NP_001029988.2	tapasin isoform 1 precursor

Pathways from BioSystems

Homologies

Homo sapiens (human)	TAPBP	NP_003181.3
Macaca mulatta (Rhesus monkey)	TAPBP	XP_001116214.1
Mus musculus (house mouse)	Tapbp	NP_001020484.1
Danio rerio (zebrafish)	si:ch211-51f10.1	NP_001124083.1
Rattus norvegicus (Norway rat)	Tapbp	NP_149089.1
Pan troglodytes (chimpanzee)	TAPBP	XP_001170532.1
Canis lupus familiaris (dog)	TAPBP	NP_001041566.1
Bos taurus (cattle)	TAPBP	NP_001039350.1
Danio rerio (zebrafish)	tapbp	XP_005159528.1
Gallus gallus (chicken)	TAPBP	NP_001029988.2
Xenopus tropicalis (tropical clawed frog)	tapbp	XP_002938728.2

Gene Ontology
Bibliography

Related articles in PubMed

A mechanistic basis for the co-evolution of chicken tapasin and major histocompatibility complex class I (MHC I) proteins.
van Hateren A, Carter R, Bailey A, Kontouli N, Williams AP, Kaufman J, Elliott T
The Journal of biological chemistry288(45)32797-808(2013 Nov)

Contribution of mutation, recombination, and gene conversion to chicken MHC-B haplotype diversity.
Hosomichi K, Miller MM, Goto RM, Wang Y, Suzuki S, Kulski JK, Nishibori M, Inoko H, Hanzawa K, Shiina T
Journal of immunology (Baltimore, Md. : 1950)181(5)3393-9(2008 Sep)

Extended gene map reveals tripartite motif, C-type lectin, and Ig superfamily type genes within a subregion of the chicken MHC-B affecting infectious disease.
Shiina T, Briles WE, Goto RM, Hosomichi K, Yanagiya K, Shimizu S, Inoko H, Miller MM
Journal of immunology (Baltimore, Md. : 1950)178(11)7162-72(2007 Jun)

Identification of the Tapasin gene in the chicken major histocompatibility complex.
Frangoulis B, Park I, Guillemot F, Séverac V, Auffray C, Zoorob R
Immunogenetics49(4)328-37(1999 Apr)

A molecular map of the chicken major histocompatibility complex: the class II beta genes are closely linked to the class I genes and the nucleolar organizer.
Guillemot F, Billault A, Pourquié O, Béhar G, Chaussé AM, Zoorob R, Kreibich G, Auffray C
The EMBO journal7(9)2775-85(1988 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following TAPBP gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TAPBP cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OGa28199	NM_001206611.2 Latest version!	Gallus gallus TAP binding protein (TAPBP), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
OGa28244	NM_001034816.3 Latest version!	Gallus gallus TAP binding protein (TAPBP), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

TAPBP ( NM_001206611.2 ) cDNA ORF clone, Gallus gallus(chicken) -> NP_001193540.1 Gallus gallus TAP binding protein (TAPBP), transcript variant 2, mRNA.

Price & Availability↑

CloneID	OGa28199
Clone ID Related Accession (Same CDS sequence)	NM_001206611.2
Accession Version	NM_001206611.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 948bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1568908800000
Organism	Gallus gallus(chicken)
Product	tapasin isoform 2 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AADN05001139.1. On Jan 12, 2012 this sequence version replaced NM_001206611.1. Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting protein (isoform 2) Is shorter compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA2201357, SAMEA2201358 [ECO:0000350] ##Evidence-Data-END##

ATGGCTGCGG GGCTGCGGCT GCTGCTGGCG GGGCTCTGCT GGTCCCAATT TAGGGTGGAA 
GACGCCGCCT CCCCTCCGCC CCCCCCCGCT CCGGTGCGCT GCGCGCTGCT GGAGGGGGTG 
GGGCGCAGGG GAGGGCTGCC GGGGGGGGGC AATGCCCGTC CTGCACTGCT GCGCTTTGGG 
GGGGACGCGG AGACCCCTCC CGAACCCGGC CCGGAGCCCG AAGTCACCTT CAATGTCAGC 
GACCCCTGGG GGACTCTGAC CCCACTCGGG GTCCCCCCCC GGACTCCCCC CAGCTGCGAA 
CTGAACCCCA CGAACCCCCA GACCGGCTCT GACCCATGGA GCCGCCCTCT GCACCCCGAC 
GCCCGCAGCC CCCCAACCGC GGGGGGGCAG TGGTGGGTGG CGGCGGTGGG GACCCCGCAG 
TACGGTGTCA CTGCGCTGCT GCAGGGGGGG ATGGGCACAG AAGGAACCAT CACTGCCGCC 
GAGCCCCCCA AGGTGACGCT GTCCCCGAAG AACCTGGTGG TGGCTCCGGG GATGTCAGCA 
GAGCTACGCT GCCACGTGTC TGGCTTCTAC CCCTTGGATG TGACGGTGAC GTGGCAGCGC 
CGCGCCGGGA GCTCGGGGAC ATCACAGTCA CCCAGGGACA CAGTGATGGA CAGCTGGACT 
TCAGGTCACC GCCAGGCAGC CGATGGAACC TACAGCCGGA CGGCGGCAGC ACGGCTGATC 
CCCGCACGCC CCCAACACCA CGGGGACGTC TACAGCTGCG TTGTCACCCA CACTGCACTG 
GCCAAACCAA TGCGCGTCTC CGTCCGACTA CTCCTGGCTG GCACCGAGGG ACCGCACCTG 
GAGGACATCA CGGGGCTCTT CTTGGTGGCC TTTGTCCTCT GTGGCCTCAT CCGTTGGCTC 
TACCCTAAAG CTGCACGACC CAAAGAGGAA ACCAAGAAAT CGCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001193540.1
CDS	31..978
Translation	MAAGLRLLLAGLCWSQFRVEDAASPPPPPAPVRCALLEGVGRRGGLPGGGNARPALLRFGGDAETPPEPGPEPEVTFNVSDPWGTLTPLGVPPRTPPSCELNPTNPQTGSDPWSRPLHPDARSPPTAGGQWWVAAVGTPQYGVTALLQGGMGTEGTITAAEPPKVTLSPKNLVVAPGMSAELRCHVSGFYPLDVTVTWQRRAGSSGTSQSPRDTVMDSWTSGHRQAADGTYSRTAAARLIPARPQHHGDVYSCVVTHTALAKPMRVSVRLLLAGTEGPHLEDITGLFLVAFVLCGLIRWLYPKAARPKEETKKSQ

Target ORF information:

RefSeq Version	NM_001206611.2
Organism	Gallus gallus(chicken)
Definition	Gallus gallus TAP binding protein (TAPBP), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001206611.2

ORF Insert Sequence:

ATGGCTGCGG GGCTGCGGCT GCTGCTGGCG GGGCTCTGCT GGTCCCAATT TAGGGTGGAA 
GACGCCGCCT CCCCTCCGCC CCCCCCCGCT CCGGTGCGCT GCGCGCTGCT GGAGGGGGTG 
GGGCGCAGGG GAGGGCTGCC GGGGGGGGGC AATGCCCGTC CTGCACTGCT GCGCTTTGGG 
GGGGACGCGG AGACCCCTCC CGAACCCGGC CCGGAGCCCG AAGTCACCTT CAATGTCAGC 
GACCCCTGGG GGACTCTGAC CCCACTCGGG GTCCCCCCCC GGACTCCCCC CAGCTGCGAA 
CTGAACCCCA CGAACCCCCA GACCGGCTCT GACCCATGGA GCCGCCCTCT GCACCCCGAC 
GCCCGCAGCC CCCCAACCGC GGGGGGGCAG TGGTGGGTGG CGGCGGTGGG GACCCCGCAG 
TACGGTGTCA CTGCGCTGCT GCAGGGGGGG ATGGGCACAG AAGGAACCAT CACTGCCGCC 
GAGCCCCCCA AGGTGACGCT GTCCCCGAAG AACCTGGTGG TGGCTCCGGG GATGTCAGCA 
GAGCTACGCT GCCACGTGTC TGGCTTCTAC CCCTTGGATG TGACGGTGAC GTGGCAGCGC 
CGCGCCGGGA GCTCGGGGAC ATCACAGTCA CCCAGGGACA CAGTGATGGA CAGCTGGACT 
TCAGGTCACC GCCAGGCAGC CGATGGAACC TACAGCCGGA CGGCGGCAGC ACGGCTGATC 
CCCGCACGCC CCCAACACCA CGGGGACGTC TACAGCTGCG TTGTCACCCA CACTGCACTG 
GCCAAACCAA TGCGCGTCTC CGTCCGACTA CTCCTGGCTG GCACCGAGGG ACCGCACCTG 
GAGGACATCA CGGGGCTCTT CTTGGTGGCC TTTGTCCTCT GTGGCCTCAT CCGTTGGCTC 
TACCCTAAAG CTGCACGACC CAAAGAGGAA ACCAAGAAAT CGCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

TAPBP ( NM_001034816.3 ) cDNA ORF clone, Gallus gallus(chicken) -> NP_001029988.2 Gallus gallus TAP binding protein (TAPBP), transcript variant 1, mRNA.

Price & Availability↑

CloneID	OGa28244
Clone ID Related Accession (Same CDS sequence)	NM_001034816.3
Accession Version	NM_001034816.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1293bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1568908800000
Organism	Gallus gallus(chicken)
Product	tapasin isoform 1 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AADN05001139.1. On Jan 12, 2012 this sequence version replaced NM_001034816.2. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AM403065.1, AM403066.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2201357, SAMEA2201358 [ECO:0000350] ##Evidence-Data-END##

ATGGCTGCGG GGCTGCGGCT GCTGCTGGCG GGGCTCTGCT GGTCCCAATT TAGGGTGGAA 
GACGCCGCCT CCCCTCCGCC CCCCCCCGCT CCGGTGCGCT GCGCGCTGCT GGAGGGGGTG 
GGGCGCAGGG GAGGGCTGCC GGGGGGGGGC AATGCCCGTC CTGCACTGCT GCGCTTTGGG 
GGGGACGCGG AGACCCCTCC CGAACCCGGC CCGGAGCCCG AAGTCACCTT CAATGTCAGC 
GACCCCTGGG GGACTCTGAC CCCACTCGGG GTCCCCCCCC GGACTCCCCC CAGCTGCGAA 
CTGAACCCCA CGAACCCCCA GACCGGCTCT GACCCATGGA GCCGCCCTCT GCACCCCGAC 
GCCCGCAGCC CCCCAACCGC GGGGGGGCAG TGGTGGGTGG CGGCGGTGGG GACCCCGCAG 
TACGGTGTCA CTGCGCTGCT GCAGGGGGGG ATGGGCACAG AAGGAACCAT CACTGCCGCC 
GTGGCCCTGG CGGTGCTCAC CCACACCCCG GCCCTCCGGG CCCGTGTGGG GTCCCCCATC 
CACCTGCACT GCGCCTTCGC CGCCCCCCCG TCCCCCTTTG TCCTCGAGTG GCGTCACCAG 
AACAGGGGTG CGGGGAGGGT CCTGCTGGCC TATGACAGTT CCACCGCCCG CGCCCCCCGC 
GCCACCCCCG GGGCCGAACT GCTGCTGGGG ACACGGGATG GGGACGGGGT GACAGCAGTG 
ACACTGCGGC TGGCACAGCC ATCACCGGGG GATGAGGGCA CCTACATCTG CTCCGTGTTC 
CTGCCCCACG GGCACACACA GACAGTGCTG CAGCTCCACG TCTTTGAGCC CCCCAAGGTG 
ACGCTGTCCC CGAAGAACCT GGTGGTGGCT CCGGGGATGT CAGCAGAGCT ACGCTGCCAC 
GTGTCTGGCT TCTACCCCTT GGATGTGACG GTGACGTGGC AGCGCCGCGC CGGGAGCTCG 
GGGACATCAC AGTCACCCAG GGACACAGTG ATGGACAGCT GGACTTCAGG TCACCGCCAG 
GCAGCCGATG GAACCTACAG CCGGACGGCG GCAGCACGGC TGATCCCCGC ACGCCCCCAA 
CACCACGGGG ACGTCTACAG CTGCGTTGTC ACCCACACTG CACTGGCCAA ACCAATGCGC 
GTCTCCGTCC GACTACTCCT GGCTGGCACC GAGGGACCGC ACCTGGAGGA CATCACGGGG 
CTCTTCTTGG TGGCCTTTGT CCTCTGTGGC CTCATCCGTT GGCTCTACCC TAAAGCTGCA 
CGACCCAAAG AGGAAACCAA GAAATCGCAG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001029988.2
CDS	31..1323
Translation	MAAGLRLLLAGLCWSQFRVEDAASPPPPPAPVRCALLEGVGRRGGLPGGGNARPALLRFGGDAETPPEPGPEPEVTFNVSDPWGTLTPLGVPPRTPPSCELNPTNPQTGSDPWSRPLHPDARSPPTAGGQWWVAAVGTPQYGVTALLQGGMGTEGTITAAVALAVLTHTPALRARVGSPIHLHCAFAAPPSPFVLEWRHQNRGAGRVLLAYDSSTARAPRATPGAELLLGTRDGDGVTAVTLRLAQPSPGDEGTYICSVFLPHGHTQTVLQLHVFEPPKVTLSPKNLVVAPGMSAELRCHVSGFYPLDVTVTWQRRAGSSGTSQSPRDTVMDSWTSGHRQAADGTYSRTAAARLIPARPQHHGDVYSCVVTHTALAKPMRVSVRLLLAGTEGPHLEDITGLFLVAFVLCGLIRWLYPKAARPKEETKKSQ

Target ORF information:

RefSeq Version	NM_001034816.3
Organism	Gallus gallus(chicken)
Definition	Gallus gallus TAP binding protein (TAPBP), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001034816.3

ORF Insert Sequence:

ATGGCTGCGG GGCTGCGGCT GCTGCTGGCG GGGCTCTGCT GGTCCCAATT TAGGGTGGAA 
GACGCCGCCT CCCCTCCGCC CCCCCCCGCT CCGGTGCGCT GCGCGCTGCT GGAGGGGGTG 
GGGCGCAGGG GAGGGCTGCC GGGGGGGGGC AATGCCCGTC CTGCACTGCT GCGCTTTGGG 
GGGGACGCGG AGACCCCTCC CGAACCCGGC CCGGAGCCCG AAGTCACCTT CAATGTCAGC 
GACCCCTGGG GGACTCTGAC CCCACTCGGG GTCCCCCCCC GGACTCCCCC CAGCTGCGAA 
CTGAACCCCA CGAACCCCCA GACCGGCTCT GACCCATGGA GCCGCCCTCT GCACCCCGAC 
GCCCGCAGCC CCCCAACCGC GGGGGGGCAG TGGTGGGTGG CGGCGGTGGG GACCCCGCAG 
TACGGTGTCA CTGCGCTGCT GCAGGGGGGG ATGGGCACAG AAGGAACCAT CACTGCCGCC 
GTGGCCCTGG CGGTGCTCAC CCACACCCCG GCCCTCCGGG CCCGTGTGGG GTCCCCCATC 
CACCTGCACT GCGCCTTCGC CGCCCCCCCG TCCCCCTTTG TCCTCGAGTG GCGTCACCAG 
AACAGGGGTG CGGGGAGGGT CCTGCTGGCC TATGACAGTT CCACCGCCCG CGCCCCCCGC 
GCCACCCCCG GGGCCGAACT GCTGCTGGGG ACACGGGATG GGGACGGGGT GACAGCAGTG 
ACACTGCGGC TGGCACAGCC ATCACCGGGG GATGAGGGCA CCTACATCTG CTCCGTGTTC 
CTGCCCCACG GGCACACACA GACAGTGCTG CAGCTCCACG TCTTTGAGCC CCCCAAGGTG 
ACGCTGTCCC CGAAGAACCT GGTGGTGGCT CCGGGGATGT CAGCAGAGCT ACGCTGCCAC 
GTGTCTGGCT TCTACCCCTT GGATGTGACG GTGACGTGGC AGCGCCGCGC CGGGAGCTCG 
GGGACATCAC AGTCACCCAG GGACACAGTG ATGGACAGCT GGACTTCAGG TCACCGCCAG 
GCAGCCGATG GAACCTACAG CCGGACGGCG GCAGCACGGC TGATCCCCGC ACGCCCCCAA 
CACCACGGGG ACGTCTACAG CTGCGTTGTC ACCCACACTG CACTGGCCAA ACCAATGCGC 
GTCTCCGTCC GACTACTCCT GGCTGGCACC GAGGGACCGC ACCTGGAGGA CATCACGGGG 
CTCTTCTTGG TGGCCTTTGT CCTCTGTGGC CTCATCCGTT GGCTCTACCC TAAAGCTGCA 
CGACCCAAAG AGGAAACCAA GAAATCGCAG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A mechanistic basis for the co-evolution of chicken tapasin and major histocompatibility complex class I (MHC I) proteins.
The Journal of biological chemistry288(45)32797-808(2013 Nov)
van Hateren A,Carter R,Bailey A,Kontouli N,Williams AP,Kaufman J,Elliott T

Contribution of mutation, recombination, and gene conversion to chicken MHC-B haplotype diversity.
Journal of immunology (Baltimore, Md. : 1950)181(5)3393-9(2008 Sep)
Hosomichi K,Miller MM,Goto RM,Wang Y,Suzuki S,Kulski JK,Nishibori M,Inoko H,Hanzawa K,Shiina T

Extended gene map reveals tripartite motif, C-type lectin, and Ig superfamily type genes within a subregion of the chicken MHC-B affecting infectious disease.
Journal of immunology (Baltimore, Md. : 1950)178(11)7162-72(2007 Jun)
Shiina T,Briles WE,Goto RM,Hosomichi K,Yanagiya K,Shimizu S,Inoko H,Miller MM

Identification of the Tapasin gene in the chicken major histocompatibility complex.
Immunogenetics49(4)328-37(1999 Apr)
Frangoulis B,Park I,Guillemot F,Séverac V,Auffray C,Zoorob R

A molecular map of the chicken major histocompatibility complex: the class II beta genes are closely linked to the class I genes and the nucleolar organizer.
The EMBO journal7(9)2775-85(1988 Sep)
Guillemot F,Billault A,Pourquié O,Béhar G,Chaussé AM,Zoorob R,Kreibich G,Auffray C

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TAPBP cDNA ORF clone, Gallus gallus(chicken)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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