| Gene Symbol | LOC100049520 |
| Entrez Gene ID | 100049520 |
| Full Name | POU domain protein class V transcription factor 1 |
| Gene Type | protein-coding |
| Organism | Oryzias latipes(Japanese medaka) |
IVD Raw Materials
ORF » Species Summary » Oryzias latipes » LOC100049520 cDNA ORF clone
| Gene Symbol | LOC100049520 |
| Entrez Gene ID | 100049520 |
| Full Name | POU domain protein class V transcription factor 1 |
| Gene Type | protein-coding |
| Organism | Oryzias latipes(Japanese medaka) |
| mRNA | Protein | Name |
|---|---|---|
| XM_011481698.2 | XP_011480000.1 | POU domain protein class V transcription factor 1 isoform X1 |
| XM_011481698.3 | XP_011480000.1 | POU domain protein class V transcription factor 1 isoform X1 |
| NM_001104869.1 | NP_001098339.1 | POU domain protein class V transcription factor 1 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Medaka Oct4 is essential for pluripotency in blastula formation and ES cell derivation.
Liu R, Li M, Li Z, Hong N, Xu H, Hong Y
Stem cell reviews and reports11(1)11-23(2015 Feb)
Medaka Oct4 is expressed during early embryo development, and in primordial germ cells and adult gonads.
Sánchez-Sánchez AV, Camp E, García-España A, Leal-Tassias A, Mullor JL
Developmental dynamics : an official publication of the American Association of Anatomists239(2)672-9(2010 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100049520 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100049520 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OJa20778 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001104869.1 | |
| Accession Version | NM_001104869.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1410bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1501948800000 | |
| Organism | Oryzias latipes(Japanese medaka) | |
| Product | POU domain protein class V transcription factor 1 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY639946.1. ##Evidence-Data-START## Transcript exon combination :: AY639946.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00029877, SAMD00029878 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGTCTGACA GGCCGCACAG CCCCGGGTCC AAAGTCCGGA CCTACGACTT CAGCCGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001098339.1 |
| CDS | 148..1557 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001104869.1 |
1 | ATGTCTGACA GGCCGCACAG CCCCGGGTCC AAAGTCCGGA CCTACGACTT CAGCCGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OJa21080 | |
| Clone ID Related Accession (Same CDS sequence) | XM_011481698.2 , XM_011481698.3 | |
| Accession Version | XM_011481698.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1416bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1491408000000 | |
| Organism | Oryzias latipes(Japanese medaka) | |
| Product | POU domain protein class V transcription factor 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019870.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 7, 2017 this sequence version replaced XM_011481698.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryzias latipes Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGACA GGCCGCACAG CCCCGGGTCC AAAGTCCGGA CCTACGACTT CAGCCGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011480000.1 |
| CDS | 253..1668 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011481698.2 |
1 | ATGTCTGACA GGCCGCACAG CCCCGGGTCC AAAGTCCGGA CCTACGACTT CAGCCGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OJa21080 | |
| Clone ID Related Accession (Same CDS sequence) | XM_011481698.2 , XM_011481698.3 | |
| Accession Version | XM_011481698.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1416bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1518537600000 | |
| Organism | Oryzias latipes(Japanese medaka) | |
| Product | POU domain protein class V transcription factor 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019870.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2018 this sequence version replaced XM_011481698.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryzias latipes Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCTGACA GGCCGCACAG CCCCGGGTCC AAAGTCCGGA CCTACGACTT CAGCCGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011480000.1 |
| CDS | 195..1610 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011481698.3 |
1 | ATGTCTGACA GGCCGCACAG CCCCGGGTCC AAAGTCCGGA CCTACGACTT CAGCCGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Medaka Oct4 is essential for pluripotency in blastula formation and ES cell derivation. |
Medaka Oct4 is expressed during early embryo development, and in primordial germ cells and adult gonads. |