| Gene Symbol | hoxb13a |
| Entrez Gene ID | 559921 |
| Full Name | homeobox B13a |
| Synonyms | zgc:136601 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
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hoxb13a cDNA ORF clone, Danio rerio(zebrafish)
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Gene
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Clones
gRNAs
The following hoxb13a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hoxb13a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID ODa03138 Clone ID Related Accession (Same CDS sequence) NM_001044912.1 Accession Version NM_001044912.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 912bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1541692800000 Organism Danio rerio(zebrafish) Product homeobox protein Hox-B13a Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC117625.1. On Sep 1, 2006 this sequence version replaced XM_683317.1. ##Evidence-Data-START## Transcript exon combination :: BC117625.1, DQ060545.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGACCACCT CCCTGGTCCT GAATCCTCGC TGGGCAGACA CGGTTATGTT TGTATATGAA
AACAACTTGG ATGAGCTGAA GAATATGGAG GGTTTGGTTG GAAGCGGCAA TTTTGCAGCC
AACCAGTGCA GGAATCTGAT GGCCCACTCG GCGTTGAGTG GTCACCCGTC TAGCCTTGTC
CATGGCTCCA GCTATCCCAC TGTGGACGTA TCGACTTCAA GTTCGGCGGA GTCGGGAAAG
CAGTGCACAC CTTGCCCAAC AGTTCCACAG GCCTCGTCCA CAGGTCCCAT CCCGTACGGC
TACTTTGGCA ACAGCTATTA TCCTTGCAGA ATGGGGCGGG GTTCCCTCAA ATCCTGCACG
CAGCCGAGTG CACTCAGCTA CACTGCAGAA AAATACATGG ATACCCCAGT CACGTCTGAA
GAATATCCTA CCAGGGCTAA AGAGTTTGCT TTTTACCACA GCTATCCCAG TCCTTATCAG
TCCATGGCCA GTTATTTGGA TGTGTCAGTT GTACAGACGC TTGGAACTGG GGAGCCGCGA
CACGATAGTC TCCTGCCAAT GGACAGCTAC CAACCGTGGG CACTGGCTAA CGGATGGGGT
AGTCAGATGT ACTGTTCCAA GGACCAGGGC CAGGCGGGTC ATCTCTGGAA GTCTGCATTA
GCAGATGTTG TGGCCCACCA ACATGACGGG GGCTCATTCC GTCGAGGTAG AAAGAAGCGG
ATACCTTACA CAAAAGTACA ACTCAAGGAA CTGGAGAAAG AATATGCAGC CAACAAATTC
ATCACAAAGG ACAAGAGGAG AAAGATTTCA GCAGTAACCA ACTTATCCGA GCGTCAAATC
ACAATTTGGT TTCAAAATAG GAGGGTTAAG GAAAAGAAGT TCATTGCCAA AGTTAAAAAC
ACCGCGCCAT AGThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_001038377.1 CDS 95..1006 Translation 
Target ORF information:
RefSeq Version NM_001044912.1 Organism Danio rerio(zebrafish) Definition Danio rerio homeobox B13a (hoxb13a), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_001044912.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGACCACCT CCCTGGTCCT GAATCCTCGC TGGGCAGACA CGGTTATGTT TGTATATGAA
AACAACTTGG ATGAGCTGAA GAATATGGAG GGTTTGGTTG GAAGCGGCAA TTTTGCAGCC
AACCAGTGCA GGAATCTGAT GGCCCACTCG GCGTTGAGTG GTCACCCGTC TAGCCTTGTC
CATGGCTCCA GCTATCCCAC TGTGGACGTA TCGACTTCAA GTTCGGCGGA GTCGGGAAAG
CAGTGCACAC CTTGCCCAAC AGTTCCACAG GCCTCGTCCA CAGGTCCCAT CCCGTACGGC
TACTTTGGCA ACAGCTATTA TCCTTGCAGA ATGGGGCGGG GTTCCCTCAA ATCCTGCACG
CAGCCGAGTG CACTCAGCTA CACTGCAGAA AAATACATGG ATACCCCAGT CACGTCTGAA
GAATATCCTA CCAGGGCTAA AGAGTTTGCT TTTTACCACA GCTATCCCAG TCCTTATCAG
TCCATGGCCA GTTATTTGGA TGTGTCAGTT GTACAGACGC TTGGAACTGG GGAGCCGCGA
CACGATAGTC TCCTGCCAAT GGACAGCTAC CAACCGTGGG CACTGGCTAA CGGATGGGGT
AGTCAGATGT ACTGTTCCAA GGACCAGGGC CAGGCGGGTC ATCTCTGGAA GTCTGCATTA
GCAGATGTTG TGGCCCACCA ACATGACGGG GGCTCATTCC GTCGAGGTAG AAAGAAGCGG
ATACCTTACA CAAAAGTACA ACTCAAGGAA CTGGAGAAAG AATATGCAGC CAACAAATTC
ATCACAAAGG ACAAGAGGAG AAAGATTTCA GCAGTAACCA ACTTATCCGA GCGTCAAATC
ACAATTTGGT TTCAAAATAG GAGGGTTAAG GAAAAGAAGT TCATTGCCAA AGTTAAAAAC
ACCGCGCCAT AGThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes.
Genome biology and evolution10(4)1088-1103(2018 04)
Malmstrøm M,Britz R,Matschiner M,Tørresen OK,Hadiaty RK,Yaakob N,Tan HH,Jakobsen KS,Salzburger W,Rüber L
Time point-based integrative analyses of deep-transcriptome identify four signal pathways in blastemal regeneration of zebrafish lower jaw.
Stem cells (Dayton, Ohio)33(3)806-18(2015 Mar)
Zhang H,Wang X,Lyu K,Gao S,Wang G,Fan C,Zhang XA,Yan J
Evidence for at least six Hox clusters in the Japanese lamprey (Lethenteron japonicum).
Proceedings of the National Academy of Sciences of the United States of America110(40)16044-9(2013 Oct)
Mehta TK,Ravi V,Yamasaki S,Lee AP,Lian MM,Tay BH,Tohari S,Yanai S,Tay A,Brenner S,Venkatesh B
Organization and structure of hox gene loci in medaka genome and comparison with those of pufferfish and zebrafish genomes.
Gene37075-82(2006 Mar)
Kurosawa G,Takamatsu N,Takahashi M,Sumitomo M,Sanaka E,Yamada K,Nishii K,Matsuda M,Asakawa S,Ishiguro H,Miura K,Kurosawa Y,Shimizu N,Kohara Y,Hori H
The duplication of the Hox gene clusters in teleost fishes.
Theory in biosciences = Theorie in den Biowissenschaften123(1)89-110(2004 Jun)
Prohaska SJ,Stadler PF
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