Gene Symbol | HM1 |
Entrez Gene ID | 732845 |
Full Name | Helminthosporium carbonum susceptibility 1 |
Synonyms | GRMZM5G881887 |
Gene Type | protein-coding |
Organism | Zea mays |
ORF » Species Summary » Zea mays » HM1 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
NM_001112450.1 | NP_001105920.1 | Helminthosporium carbonum susceptibility 1 |
XM_008651161.2 | XP_008649383.1 | helminthosporium carbonum susceptibility 1 isoform X1 |
NM_001112450.2 | NP_001105920.2 | Helminthosporium carbonum susceptibility 1 |
XM_008651161.3 | XP_008649383.1 | helminthosporium carbonum susceptibility 1 isoform X1 |
XM_008651168.1 | XP_008649390.1 | helminthosporium carbonum susceptibility 1 isoform X2 |
Population genetics of duplicated disease-defense genes, hm1 and hm2, in maize (Zea mays ssp. mays L.) and its wild ancestor (Zea mays ssp. parviglumis).
Zhang L, Peek AS, Dunams D, Gaut BS
Genetics162(2)851-60(2002 Oct)
Plant-pathogen microevolution: molecular basis for the origin of a fungal disease in maize.
Multani DS, Meeley RB, Paterson AH, Gray J, Briggs SP, Johal GS
Proceedings of the National Academy of Sciences of the United States of America95(4)1686-91(1998 Feb)
Reductase activity encoded by the HM1 disease resistance gene in maize.
Johal GS, Briggs SP
Science (New York, N.Y.)258(5084)985-7(1992 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HM1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HM1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa18662 | |
Clone ID Related Accession (Same CDS sequence) | NM_001112450.1 | |
Accession Version | NM_001112450.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1074bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1490976000000 | |
Organism | Zea mays | |
Product | Helminthosporium carbonum susceptibility 1 | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF041043.1. ##Evidence-Data-START## Transcript exon combination :: AF041043.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03135450, SAMN03135452 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCCGAAA AGGAGAGCAA CGGAGTGCGG GTGTGCGTCA CCGGAGGAGC CGGGTTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001105920.1 |
CDS | 50..1123 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCCGAAA AGGAGAGCAA CGGAGTGCGG GTGTGCGTCA CCGGAGGAGC CGGGTTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa22834 | |
Clone ID Related Accession (Same CDS sequence) | NM_001112450.2 , XM_008651168.1 | |
Accession Version | NM_001112450.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1140bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1551801600000 | |
Organism | Zea mays | |
Product | Helminthosporium carbonum susceptibility 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01001611.1, EU961642.1 and EZ088470.1. On or before Jun 16, 2017 this sequence version replaced XM_008651168.1, NM_001112450.1. ##Evidence-Data-START## Transcript exon combination :: SRR3147046.17489.1, SRR3147028.11369.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780085, SAMN00780135 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCAGAGC AAACCCATAG GTCCAGTCCA AATCCAATCC CTGTTGCCAT CAGAATTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001105920.2 |
CDS | 66..1205 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCAGAGC AAACCCATAG GTCCAGTCCA AATCCAATCC CTGTTGCCAT CAGAATTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa22833 | |
Clone ID Related Accession (Same CDS sequence) | XM_008651161.2 , XM_008651161.3 | |
Accession Version | XM_008651161.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1143bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | helminthosporium carbonum susceptibility 1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008651161.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGAGC AAACCCATAG GTCCAGTCCA AATCCAATCC CTGTTGCCAT CAGAATTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008649383.1 |
CDS | 97..1239 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCAGAGC AAACCCATAG GTCCAGTCCA AATCCAATCC CTGTTGCCAT CAGAATTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa22833 | |
Clone ID Related Accession (Same CDS sequence) | XM_008651161.2 , XM_008651161.3 | |
Accession Version | XM_008651161.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1143bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | helminthosporium carbonum susceptibility 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008651161.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGAGC AAACCCATAG GTCCAGTCCA AATCCAATCC CTGTTGCCAT CAGAATTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008649383.1 |
CDS | 93..1235 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAGAGC AAACCCATAG GTCCAGTCCA AATCCAATCC CTGTTGCCAT CAGAATTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa22834 | |
Clone ID Related Accession (Same CDS sequence) | NM_001112450.2 , XM_008651168.1 | |
Accession Version | XM_008651168.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1140bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | helminthosporium carbonum susceptibility 1 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGAGC AAACCCATAG GTCCAGTCCA AATCCAATCC CTGTTGCCAT CAGAATTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008649390.1 |
CDS | 95..1234 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAGAGC AAACCCATAG GTCCAGTCCA AATCCAATCC CTGTTGCCAT CAGAATTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Population genetics of duplicated disease-defense genes, hm1 and hm2, in maize (Zea mays ssp. mays L.) and its wild ancestor (Zea mays ssp. parviglumis). |
Plant-pathogen microevolution: molecular basis for the origin of a fungal disease in maize. |
Reductase activity encoded by the HM1 disease resistance gene in maize. |