Gene Symbol | LOC100501489 |
Entrez Gene ID | 100501489 |
Full Name | transducin family protein / WD-40 repeat family protein |
Gene Type | protein-coding |
Organism | Zea mays |
Learn More
Learn More
Learn More
Learn More
Learn More
ORF » Species Summary » Zea mays » LOC100501489 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_008648912.2 | XP_008647134.1 | uncharacterized protein LOC100501489 isoform X1 |
NM_001196193.1 | NP_001183122.1 | uncharacterized protein LOC100501489 |
NM_001361332.1 | NP_001348261.1 | uncharacterized protein LOC100501489 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100501489 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100501489 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa14285 | |
Clone ID Related Accession (Same CDS sequence) | NM_001196193.1 | |
Accession Version | NM_001196193.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 471bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1490976000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100501489 | |
Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BT085422.2. ##Evidence-Data-START## Transcript exon combination :: BT085422.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780135, SAMN00780136 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCACTAT CATTGATCCT TTACCAGTTC AAAACTTACA AAATCCTACT GTTATTGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001183122.1 |
CDS | 927..1397 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCACTAT CATTGATCCT TTACCAGTTC AAAACTTACA AAATCCTACT GTTATTGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa31333 | |
Clone ID Related Accession (Same CDS sequence) | XM_008648912.2 , NM_001361332.1 | |
Accession Version | NM_001361332.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2820bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1525363200000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100501489 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01001121.1, BT085422.2 and EU944823.1. On Mar 28, 2018 this sequence version replaced XM_008648912.2. ##Evidence-Data-START## Transcript exon combination :: SRR3147030.399.1, SRR3147024.14820.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780135, SAMN00780136 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTGAAGG CTTACCTCCG CTACGAGCCG GCCCTCACCT TCGGTGTGAT TGCGTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001348261.1 |
CDS | 99..2918 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAAGG CTTACCTCCG CTACGAGCCG GCCCTCACCT TCGGTGTGAT TGCGTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa31333 | |
Clone ID Related Accession (Same CDS sequence) | XM_008648912.2 , NM_001361332.1 | |
Accession Version | XM_008648912.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2820bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100501489 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008648912.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAAGG CTTACCTCCG CTACGAGCCG GCCCTCACCT TCGGTGTGAT TGCGTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008647134.1 |
CDS | 121..2940 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAAGG CTTACCTCCG CTACGAGCCG GCCCTCACCT TCGGTGTGAT TGCGTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |
Insights into corn genes derived from large-scale cDNA sequencing. |