LINJ_20_1770 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_20_1770
Entrez Gene ID	5068723
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001465268.1	XP_001465305.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_20_1770 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_20_1770 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc02441	XM_001465268.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_20_1770 ( XM_001465268.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001465305.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc02441
Clone ID Related Accession (Same CDS sequence)	XM_001465268.1
Accession Version	XM_001465268.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3021bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009404). COMPLETENESS: incomplete on both ends.

ATGCTTTTTG TGAGCCGTGA TCGACGTTGT GTTCTCGGAA AGTCGACACG CGTGCAAGAA 
AGACATGGAG TGATCTGGTG CATTCGCTAC GATTCAAGGG AGTGTGTGTG TTTATCTTCC 
GACACCATGA CGATTATCCC TATTATTCCA GAGGCCGAGG ATGCCATCAT GCGCACCAAA 
GAGTTCGAGG GCGGCTCAGT CGCGTCAGTG GCCGCGTCGC AGACTGTGCC GGACTGCTTT 
TTTGTAGCTC ATGGGGAAAG CCGTAATCTG ACTGTAGTGC ATGGAGATTC TGGCCGCACT 
CTCCATAAGG AAACGCTCTC GCTGTTGTCG GAGGAGCTGG ACCGAGCCTC GGACGTAGCG 
CGAGTGGTCC CGGCGATTTA TGCGCATGGC TGCAGGGGTG TGTGCTTGCT TGCCGTAGTC 
TATCCGGACG CTGTGTCGTT TACTGCATGG GAAAATCACT TGCTGGTGTC CACCGCAGTG 
GTGAAGAATG AGCTCACTAC CTCCTTTGGT CTTGCGTTTT GGAAAGGCAC GGCAGATGGT 
GCCCGGCTGT GCGTTGTGCG CTCCGACTCT CGATGCCTAA TGTATGATGT GGTGATGAGC 
AAGAGATTTC CTTGCGTGGA GGAAATTGTA GTGGCTCAGC AGGTGACGTT GCCGAGTCAT 
GTGGCCTGTC TGATGGGTGG GGTGGAGTCT GGCGTCTTCC TGTGTTGGCG CAGTGGCACC 
TCACTAGCGC GCTACACCGC TCTACTGCAA TCCCGCGCGG AAGAGGACAA GTTCGAGCCT 
ATCGAGGTGT ACAGCGCTGT CCGCCCCTCG CTTGCCTCGG CCTCGGTGCT GCTGCTCGAG 
GTAGTTCCGA TTTACGGCAG CTACGGCGTT GTGTGCTTGT TCAGCACGGG AGAGTGCCAC 
CTTTCGCTGT ACAACAATCC TGGTACGGTA CTGCTCGCAG TCGAGGAGCA CCCCTATGAT 
GCAACGAGCT GTCTTGCATT CGAGGGCGGC GCAGGCAGGT ACTCTTGTGT GCTCGGGTTC 
AACGACGGCG ACATAAGAGT GTTCGTTGGC GGACAAATAT GGGCAAACGT TCGTGTCGCA 
CACTGTGGTG CCGTGGATCG GCTGCTGAGG CTCCCGAAAA TGAATGAAAC AGACGACACG 
TTGTTCGTGA GCATGTGCAC TGAAATGGGT ACTGTGTGCT GCCACGCGGG CGAAAAAGCT 
GCGGTGTCGC GGACCATGTG CTCCCCATCG AGGCCGCTTA CCGCTTGCCT GCTTAACCGA 
AAGCTAGAGT ACATGTTTCT GTTCTCGGAG GATAACGGCA ACCTCTGGCA CCTCCCCACG 
TGTCGTCTCG AGCGGGCGTT TCGGTCGCTT CCTGGGCCAC TGAATCAGCA GCTGGACAAC 
CTCCTCGAGC ACCACTGGGC ATCCGCGCTG AGCATCATCA GGTACCGGTT TGTAGGAGGG 
GAGCACTACG CAATCCGTAT CGATGTCGAC TCCCTTCTCA GTGGCCTTGG TGTAGGGGAG 
CAGCCCGTGA AGCGTTCGTC GCTGGAGTAC AGCTCGGCAT TGCGGCTGAT GCTCGGGTGC 
CTCGGCGAGA GCTGTCCTCC TTCATTTCCC AGAGAGAATG CTCTTTGCGA GGCGTTAGAT 
GACTTGGGCT TAGTCGTAAC TGGAGCGCAG ACTCACGAGT GTGTTTGGTG CGCGATCCTG 
TTGCTTTGCG GACTTCTAAG CCGCACATCG GAGGGAGCAT GCGCGGCTGC CATCTACTCC 
ATAATAGAGT CGCTTGGTGA CAAGCTTACC TCCAGTCTGG CTCCAGATCC ATACCGGCAG 
GCCGACGCCG TGCAGCACTT TTTATCGCGC TTCTATACCC TGCGACGGTC AACACCTGCA 
GCATTCCGCC ACGCACTTCG GCTGATGGCA ACGAAGATGT CTGTGTGTAG CCTCGCCGAT 
GTCGTGAACT TACTGCGCTC ACGTGCGTTT GCCGCGCAAT CGCACGGAGC TGCTGAAGAC 
GAAGCACCTG GTGCGCCGCC GCTGATTGAA AGTGGAAGCG CATTTGCTGC TCTATCGGTT 
CTGTTGAACC TGGCTTCTCA GCGTGCCGAC TACAGCCTCC AAGCGGAAAC GCCGCTTTTC 
AGCCTCCTAC GCCAGAGCAC TGTAGAGGCT CAGCGCGCCG TCACGGCCGC GTTGGACGAC 
GACCACACGC TTTCCAATCG GCCCGCAACA CTGCTCGGGT TGATAGAGAG CCACGCCACT 
TTGTGTGCCT TGGATGAAAA GGACCCCTTC CAGAGCTTCG TGAAGGCCCT TATGAGGGAG 
GCTTTTCGTG GGAGTGGCGA GGAAGCCAAG CAGGCGTCGC TGGAAGCGCT GGAGCGGCTG 
ATGGCGCAGG ATCCGCAGGG CTTTCTCTCT ACCTACATCG TAACAGACTT TCACCTTAAC 
GCAGAGTGCC GGCCGTACAT TATTGTCTTC CTTGCTCACT TCGTTAGAAA CTTCCCATAC 
GAGGCCTATA CCGTGTTTAG CACAATCGCG GACATATTTG TGAGCGGTCT GAGCGATCTT 
TCTTCCGCCA GCAAGGACGC TGCGGCCATC TATCATACTG CTGTGTCGCA GCTGCTCCGC 
GTCACGGCCG CGTCGCTCCC CAGCGTATCG CTACAGCAGA GCCTGCGGCA CGTGGCTGTG 
GGCCGAAGCG ACGGCAAAGT GGTGGTGTAC AACGTGAAGG CAGCATCGAT CGTAACCGCC 
TTCCAGGCTC ACTCAGCGCC GGTTTTGGGG GTTGCCTACA GTGGCAACAC ATCGACTCTT 
GATATCGCCA CCATCGCCGA GACTCTGGAC GAGATCAAGG TGTGGCGGTC GCCAAATCAG 
TCGTCTTCCC TCACCAGCTT CTTCAGCGGC AGCGGGAGCG CGAGCTTCAA GCTGGTTACC 
GCCGTGCCTG TGCCGTCGAT GGGTCTGCGT GGAGAAAGCG TGTCGCTCCT CATCAAGTTC 
TTTCAGCTCA ACTGGCTGTC GCCGCAGTGT GTCGAGTTTT CTTCTCCGTG GCACGGTAAG 
GTGCAAGTGG CGCTGCCGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001465305.1
CDS	1..3021
Translation	MLFVSRDRRCVLGKSTRVQERHGVIWCIRYDSRECVCLSSDTMTIIPIIPEAEDAIMRTKEFEGGSVASVAASQTVPDCFFVAHGESRNLTVVHGDSGRTLHKETLSLLSEELDRASDVARVVPAIYAHGCRGVCLLAVVYPDAVSFTAWENHLLVSTAVVKNELTTSFGLAFWKGTADGARLCVVRSDSRCLMYDVVMSKRFPCVEEIVVAQQVTLPSHVACLMGGVESGVFLCWRSGTSLARYTALLQSRAEEDKFEPIEVYSAVRPSLASASVLLLEVVPIYGSYGVVCLFSTGECHLSLYNNPGTVLLAVEEHPYDATSCLAFEGGAGRYSCVLGFNDGDIRVFVGGQIWANVRVAHCGAVDRLLRLPKMNETDDTLFVSMCTEMGTVCCHAGEKAAVSRTMCSPSRPLTACLLNRKLEYMFLFSEDNGNLWHLPTCRLERAFRSLPGPLNQQLDNLLEHHWASALSIIRYRFVGGEHYAIRIDVDSLLSGLGVGEQPVKRSSLEYSSALRLMLGCLGESCPPSFPRENALCEALDDLGLVVTGAQTHECVWCAILLLCGLLSRTSEGACAAAIYSIIESLGDKLTSSLAPDPYRQADAVQHFLSRFYTLRRSTPAAFRHALRLMATKMSVCSLADVVNLLRSRAFAAQSHGAAEDEAPGAPPLIESGSAFAALSVLLNLASQRADYSLQAETPLFSLLRQSTVEAQRAVTAALDDDHTLSNRPATLLGLIESHATLCALDEKDPFQSFVKALMREAFRGSGEEAKQASLEALERLMAQDPQGFLSTYIVTDFHLNAECRPYIIVFLAHFVRNFPYEAYTVFSTIADIFVSGLSDLSSASKDAAAIYHTAVSQLLRVTAASLPSVSLQQSLRHVAVGRSDGKVVVYNVKAASIVTAFQAHSAPVLGVAYSGNTSTLDIATIAETLDEIKVWRSPNQSSSLTSFFSGSGSASFKLVTAVPVPSMGLRGESVSLLIKFFQLNWLSPQCVEFSSPWHGKVQVALP

Target ORF information:

RefSeq Version	XM_001465268.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001465268.1

ORF Insert Sequence:

ATGCTTTTTG TGAGCCGTGA TCGACGTTGT GTTCTCGGAA AGTCGACACG CGTGCAAGAA 
AGACATGGAG TGATCTGGTG CATTCGCTAC GATTCAAGGG AGTGTGTGTG TTTATCTTCC 
GACACCATGA CGATTATCCC TATTATTCCA GAGGCCGAGG ATGCCATCAT GCGCACCAAA 
GAGTTCGAGG GCGGCTCAGT CGCGTCAGTG GCCGCGTCGC AGACTGTGCC GGACTGCTTT 
TTTGTAGCTC ATGGGGAAAG CCGTAATCTG ACTGTAGTGC ATGGAGATTC TGGCCGCACT 
CTCCATAAGG AAACGCTCTC GCTGTTGTCG GAGGAGCTGG ACCGAGCCTC GGACGTAGCG 
CGAGTGGTCC CGGCGATTTA TGCGCATGGC TGCAGGGGTG TGTGCTTGCT TGCCGTAGTC 
TATCCGGACG CTGTGTCGTT TACTGCATGG GAAAATCACT TGCTGGTGTC CACCGCAGTG 
GTGAAGAATG AGCTCACTAC CTCCTTTGGT CTTGCGTTTT GGAAAGGCAC GGCAGATGGT 
GCCCGGCTGT GCGTTGTGCG CTCCGACTCT CGATGCCTAA TGTATGATGT GGTGATGAGC 
AAGAGATTTC CTTGCGTGGA GGAAATTGTA GTGGCTCAGC AGGTGACGTT GCCGAGTCAT 
GTGGCCTGTC TGATGGGTGG GGTGGAGTCT GGCGTCTTCC TGTGTTGGCG CAGTGGCACC 
TCACTAGCGC GCTACACCGC TCTACTGCAA TCCCGCGCGG AAGAGGACAA GTTCGAGCCT 
ATCGAGGTGT ACAGCGCTGT CCGCCCCTCG CTTGCCTCGG CCTCGGTGCT GCTGCTCGAG 
GTAGTTCCGA TTTACGGCAG CTACGGCGTT GTGTGCTTGT TCAGCACGGG AGAGTGCCAC 
CTTTCGCTGT ACAACAATCC TGGTACGGTA CTGCTCGCAG TCGAGGAGCA CCCCTATGAT 
GCAACGAGCT GTCTTGCATT CGAGGGCGGC GCAGGCAGGT ACTCTTGTGT GCTCGGGTTC 
AACGACGGCG ACATAAGAGT GTTCGTTGGC GGACAAATAT GGGCAAACGT TCGTGTCGCA 
CACTGTGGTG CCGTGGATCG GCTGCTGAGG CTCCCGAAAA TGAATGAAAC AGACGACACG 
TTGTTCGTGA GCATGTGCAC TGAAATGGGT ACTGTGTGCT GCCACGCGGG CGAAAAAGCT 
GCGGTGTCGC GGACCATGTG CTCCCCATCG AGGCCGCTTA CCGCTTGCCT GCTTAACCGA 
AAGCTAGAGT ACATGTTTCT GTTCTCGGAG GATAACGGCA ACCTCTGGCA CCTCCCCACG 
TGTCGTCTCG AGCGGGCGTT TCGGTCGCTT CCTGGGCCAC TGAATCAGCA GCTGGACAAC 
CTCCTCGAGC ACCACTGGGC ATCCGCGCTG AGCATCATCA GGTACCGGTT TGTAGGAGGG 
GAGCACTACG CAATCCGTAT CGATGTCGAC TCCCTTCTCA GTGGCCTTGG TGTAGGGGAG 
CAGCCCGTGA AGCGTTCGTC GCTGGAGTAC AGCTCGGCAT TGCGGCTGAT GCTCGGGTGC 
CTCGGCGAGA GCTGTCCTCC TTCATTTCCC AGAGAGAATG CTCTTTGCGA GGCGTTAGAT 
GACTTGGGCT TAGTCGTAAC TGGAGCGCAG ACTCACGAGT GTGTTTGGTG CGCGATCCTG 
TTGCTTTGCG GACTTCTAAG CCGCACATCG GAGGGAGCAT GCGCGGCTGC CATCTACTCC 
ATAATAGAGT CGCTTGGTGA CAAGCTTACC TCCAGTCTGG CTCCAGATCC ATACCGGCAG 
GCCGACGCCG TGCAGCACTT TTTATCGCGC TTCTATACCC TGCGACGGTC AACACCTGCA 
GCATTCCGCC ACGCACTTCG GCTGATGGCA ACGAAGATGT CTGTGTGTAG CCTCGCCGAT 
GTCGTGAACT TACTGCGCTC ACGTGCGTTT GCCGCGCAAT CGCACGGAGC TGCTGAAGAC 
GAAGCACCTG GTGCGCCGCC GCTGATTGAA AGTGGAAGCG CATTTGCTGC TCTATCGGTT 
CTGTTGAACC TGGCTTCTCA GCGTGCCGAC TACAGCCTCC AAGCGGAAAC GCCGCTTTTC 
AGCCTCCTAC GCCAGAGCAC TGTAGAGGCT CAGCGCGCCG TCACGGCCGC GTTGGACGAC 
GACCACACGC TTTCCAATCG GCCCGCAACA CTGCTCGGGT TGATAGAGAG CCACGCCACT 
TTGTGTGCCT TGGATGAAAA GGACCCCTTC CAGAGCTTCG TGAAGGCCCT TATGAGGGAG 
GCTTTTCGTG GGAGTGGCGA GGAAGCCAAG CAGGCGTCGC TGGAAGCGCT GGAGCGGCTG 
ATGGCGCAGG ATCCGCAGGG CTTTCTCTCT ACCTACATCG TAACAGACTT TCACCTTAAC 
GCAGAGTGCC GGCCGTACAT TATTGTCTTC CTTGCTCACT TCGTTAGAAA CTTCCCATAC 
GAGGCCTATA CCGTGTTTAG CACAATCGCG GACATATTTG TGAGCGGTCT GAGCGATCTT 
TCTTCCGCCA GCAAGGACGC TGCGGCCATC TATCATACTG CTGTGTCGCA GCTGCTCCGC 
GTCACGGCCG CGTCGCTCCC CAGCGTATCG CTACAGCAGA GCCTGCGGCA CGTGGCTGTG 
GGCCGAAGCG ACGGCAAAGT GGTGGTGTAC AACGTGAAGG CAGCATCGAT CGTAACCGCC 
TTCCAGGCTC ACTCAGCGCC GGTTTTGGGG GTTGCCTACA GTGGCAACAC ATCGACTCTT 
GATATCGCCA CCATCGCCGA GACTCTGGAC GAGATCAAGG TGTGGCGGTC GCCAAATCAG 
TCGTCTTCCC TCACCAGCTT CTTCAGCGGC AGCGGGAGCG CGAGCTTCAA GCTGGTTACC 
GCCGTGCCTG TGCCGTCGAT GGGTCTGCGT GGAGAAAGCG TGTCGCTCCT CATCAAGTTC 
TTTCAGCTCA ACTGGCTGTC GCCGCAGTGT GTCGAGTTTT CTTCTCCGTG GCACGGTAAG 
GTGCAAGTGG CGCTGCCGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_20_1770 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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