LOC541919 cDNA ORF clone, Zea mays

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC541919
Entrez Gene ID	541919
Full Name	pyruvate decarboxylase 3
Synonyms	GRMZM2G087186,PDC
Gene Type	protein-coding
Organism	Zea mays

mRNA and Protein(s)

mRNA	Protein	Name
NM_001111582.2	NP_001105052.1	pyruvate decarboxylase 3

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The B73 maize genome: complexity, diversity, and dynamics.
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, Strong C, Delehaunty K, Fronick C, Courtney B, Rock SM, Belter E, Du F, Kim K, Abbott RM, Cotton M, Levy A, Marchetto P, Ochoa K, Jackson SM, Gillam B, Chen W, Yan L, Higginbotham J, Cardenas M, Waligorski J, Applebaum E, Phelps L, Falcone J, Kanchi K, Thane T, Scimone A, Thane N, Henke J, Wang T, Ruppert J, Shah N, Rotter K, Hodges J, Ingenthron E, Cordes M, Kohlberg S, Sgro J, Delgado B, Mead K, Chinwalla A, Leonard S, Crouse K, Collura K, Kudrna D, Currie J, He R, Angelova A, Rajasekar S, Mueller T, Lomeli R, Scara G, Ko A, Delaney K, Wissotski M, Lopez G, Campos D, Braidotti M, Ashley E, Golser W, Kim H, Lee S, Lin J, Dujmic Z, Kim W, Talag J, Zuccolo A, Fan C, Sebastian A, Kramer M, Spiegel L, Nascimento L, Zutavern T, Miller B, Ambroise C, Muller S, Spooner W, Narechania A, Ren L, Wei S, Kumari S, Faga B, Levy MJ, McMahan L, Van Buren P, Vaughn MW, Ying K, Yeh CT, Emrich SJ, Jia Y, Kalyanaraman A, Hsia AP, Barbazuk WB, Baucom RS, Brutnell TP, Carpita NC, Chaparro C, Chia JM, Deragon JM, Estill JC, Fu Y, Jeddeloh JA, Han Y, Lee H, Li P, Lisch DR, Liu S, Liu Z, Nagel DH, McCann MC, SanMiguel P, Myers AM, Nettleton D, Nguyen J, Penning BW, Ponnala L, Schneider KL, Schwartz DC, Sharma A, Soderlund C, Springer NM, Sun Q, Wang H, Waterman M, Westerman R, Wolfgruber TK, Yang L, Yu Y, Zhang L, Zhou S, Zhu Q, Bennetzen JL, Dawe RK, Jiang J, Jiang N, Presting GG, Wessler SR, Aluru S, Martienssen RA, Clifton SW, McCombie WR, Wing RA, Wilson RK
Science (New York, N.Y.)326(5956)1112-5(2009 Nov)

DNA array profiling of gene expression changes during maize embryo development.
Lee JM, Williams ME, Tingey SV, Rafalski JA
Functional & integrative genomics2(1-2)13-27(2002 May)

Multiple pyruvate decarboxylase genes in maize are induced by hypoxia.
Peschke VM, Sachs MM
Molecular & general genetics : MGG240(2)206-12(1993 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC541919 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC541919 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OZa67823	NM_001111582.2 Latest version!	Zea mays pyruvate decarboxylase 3 (LOC541919), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC541919 ( NM_001111582.2 ) cDNA ORF clone, Zea mays -> NP_001105052.1 Zea mays pyruvate decarboxylase 3 (LOC541919), mRNA.

Price & Availability↑

CloneID	OZa67823
Clone ID Related Accession (Same CDS sequence)	NM_001111582.2
Accession Version	NM_001111582.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1821bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1564934400000
Organism	Zea mays
Product	pyruvate decarboxylase 3
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BT056069.1. On Feb 9, 2017 this sequence version replaced NM_001111582.1. ##Evidence-Data-START## Transcript exon combination :: BT056069.1, SRR3147048.6274.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780135 [ECO:0000348] ##Evidence-Data-END##

ATGGACACCC ATATCGGATC CGTGAACGGG GCGGCGTCGA ACCAGACGGT TGGCTGCCCG 
GCGTCGGCGC CGGGGTGCCC GATGGCGTCC ACGCCGGCGC AGCCCGCGGC GACCCTGTCG 
GCGGGGGAGG CGTCGCTGGG GCGCCACCTC GCGCGTCGCC TCGTGCAGGT CGGCGTCAAC 
GATGTATTCG CGGTTCCGGG GGACTTCAAC CTCACGCTGC TCGACCACCT GATCGCCGAG 
CCCGGCCTGC GCCTCGTCGG CTGCTGCAAC GAGCTCAACG CCGGGTACGC CGCCGACGGG 
TACGCGCGCG CGCGCGGCGT CGGGGCCTGC GCCGTCACGT TCACAGTCGG GGGGCTCAGC 
GTGCTCAACG CCATCGCGGG CGCCTACAGC GAGAACCTGC CCGTCATCTG CATCGCCGGC 
GGGCCCAACT CCAACGACTA CGGGACCAAC CGCATCCTCC ACCACACCAT CGGCCTCCCC 
GACTTCTCGC AGGAGCTCCG CTGCTTCCAG ACCGTCACCT GCCATCAGGC GGTGGTGAAC 
AATCTGGATG ACGCGCACGA GCAGATCGAC ACGGCCATTG CCACGGCACT GAGGGAGAGC 
AAGCCCGTGT ACCTCAGCAT CAGCTGCAAC CTCCCTGGGC TGCCTCATCC TACCTTCAGC 
CGCGACCCAG TGCCCTTCTT CCTCACCCCC AGGACGAGCA ACAAGATGGG GCTAGAGGCT 
GCAGTGGAGG CAACTGTCGA ATTCCTGAAC AAGGCGGTGA AGCCAGTCCT TGTCGCCGGC 
CCCAAACTGC GTGTGGCAAA GGCAGGAAAG GCATTTGTCG ATATGGTAGA TGCCAGTGGC 
TATGCCTATG CCGTGATGCC ATCGGCCAAG GGTCTTGTGC CAGAGACTCA CCCCCACTTC 
ATCGGCACCT ACTGGGGCGC CGTCAGCACC GCCTTCTGTG CGGAGATTGT TGAGTCCGCA 
GATGCCTACC TCTTTGCAGG CCCCATTTTC AATGACTACA GCTCTGTTGG CTACTCATTC 
CTCCTCAAGA AGGAAAAGGC CATCATCGTC CAGCCTGAGC GTGTGATAGT GGGGAATGGG 
CCGGCATTCG GATGTGTGAT GATGAAAGAG TTCTTGTCTG AATTGGCTAA GAGGGTTAAT 
AAGAACACCA CTGCCTATGA GAATTACAAG AGGATCTTTG TACCTGAGGG CCAGCCGCTG 
GAAAGCGAGC CAAATGAGCC ACTGCGAGTG AATGTGCTCT TCAAGCACGT CCAGAAGATG 
TTGACTGGTG ATAGCGCGGT GATTGCTGAG ACTGGTGACT CCTGGTTCAA CTGCCAGAAG 
CTTAAGCTGC CAGAAGGCTG TGGGTATGAA TTCCAAATGC AGTATGGTTC GATTGGATGG 
TCAGTGGGTG CATTGCTCGG ATATGCTCAG GGTGCGAACC ACAAGCGTGT GATTGCCTTC 
ATTGGTGATG GGAGCTTCCA GGTTACAGCA CAGGATGTGT CAACTATGCT GCGATGTGAG 
CAGAACAGCA TAATCTTCCT GATCAACAAC GGTGGGTACA CGATTGAGGT GGAAATCCAT 
GACGGGCCAT ACAACGTCAT CAAGAACTGG AACTACACTG GCTTTGTGGA CGCCATCCAC 
AATGGCTTGG GCAAGTGCTG GACCTCCAAG GTGAAGAGCG AGGAGGAGCT GACGGCTGCC 
ATTGAGACAG CGCTAGGGGA GAAGAAGGAC TGCCTGTGCT TCATCGAGGT GATCGCGCAC 
AAGGACGACA CCAGCAAAGA GCTGCTGGAA TGGGGCTCTA GGGTTTCTGC CGCCAACTCC 
CGGCCACCAA ATCCTCAGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001105052.1
CDS	142..1962
Translation	MDTHIGSVNGAASNQTVGCPASAPGCPMASTPAQPAATLSAGEASLGRHLARRLVQVGVNDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVNNLDDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPTFSRDPVPFFLTPRTSNKMGLEAAVEATVEFLNKAVKPVLVAGPKLRVAKAGKAFVDMVDASGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSFLLKKEKAIIVQPERVIVGNGPAFGCVMMKEFLSELAKRVNKNTTAYENYKRIFVPEGQPLESEPNEPLRVNVLFKHVQKMLTGDSAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYAQGANHKRVIAFIGDGSFQVTAQDVSTMLRCEQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGFVDAIHNGLGKCWTSKVKSEEELTAAIETALGEKKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ

Target ORF information:

RefSeq Version	NM_001111582.2
Organism	Zea mays
Definition	Zea mays pyruvate decarboxylase 3 (LOC541919), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001111582.2

ORF Insert Sequence:

ATGGACACCC ATATCGGATC CGTGAACGGG GCGGCGTCGA ACCAGACGGT TGGCTGCCCG 
GCGTCGGCGC CGGGGTGCCC GATGGCGTCC ACGCCGGCGC AGCCCGCGGC GACCCTGTCG 
GCGGGGGAGG CGTCGCTGGG GCGCCACCTC GCGCGTCGCC TCGTGCAGGT CGGCGTCAAC 
GATGTATTCG CGGTTCCGGG GGACTTCAAC CTCACGCTGC TCGACCACCT GATCGCCGAG 
CCCGGCCTGC GCCTCGTCGG CTGCTGCAAC GAGCTCAACG CCGGGTACGC CGCCGACGGG 
TACGCGCGCG CGCGCGGCGT CGGGGCCTGC GCCGTCACGT TCACAGTCGG GGGGCTCAGC 
GTGCTCAACG CCATCGCGGG CGCCTACAGC GAGAACCTGC CCGTCATCTG CATCGCCGGC 
GGGCCCAACT CCAACGACTA CGGGACCAAC CGCATCCTCC ACCACACCAT CGGCCTCCCC 
GACTTCTCGC AGGAGCTCCG CTGCTTCCAG ACCGTCACCT GCCATCAGGC GGTGGTGAAC 
AATCTGGATG ACGCGCACGA GCAGATCGAC ACGGCCATTG CCACGGCACT GAGGGAGAGC 
AAGCCCGTGT ACCTCAGCAT CAGCTGCAAC CTCCCTGGGC TGCCTCATCC TACCTTCAGC 
CGCGACCCAG TGCCCTTCTT CCTCACCCCC AGGACGAGCA ACAAGATGGG GCTAGAGGCT 
GCAGTGGAGG CAACTGTCGA ATTCCTGAAC AAGGCGGTGA AGCCAGTCCT TGTCGCCGGC 
CCCAAACTGC GTGTGGCAAA GGCAGGAAAG GCATTTGTCG ATATGGTAGA TGCCAGTGGC 
TATGCCTATG CCGTGATGCC ATCGGCCAAG GGTCTTGTGC CAGAGACTCA CCCCCACTTC 
ATCGGCACCT ACTGGGGCGC CGTCAGCACC GCCTTCTGTG CGGAGATTGT TGAGTCCGCA 
GATGCCTACC TCTTTGCAGG CCCCATTTTC AATGACTACA GCTCTGTTGG CTACTCATTC 
CTCCTCAAGA AGGAAAAGGC CATCATCGTC CAGCCTGAGC GTGTGATAGT GGGGAATGGG 
CCGGCATTCG GATGTGTGAT GATGAAAGAG TTCTTGTCTG AATTGGCTAA GAGGGTTAAT 
AAGAACACCA CTGCCTATGA GAATTACAAG AGGATCTTTG TACCTGAGGG CCAGCCGCTG 
GAAAGCGAGC CAAATGAGCC ACTGCGAGTG AATGTGCTCT TCAAGCACGT CCAGAAGATG 
TTGACTGGTG ATAGCGCGGT GATTGCTGAG ACTGGTGACT CCTGGTTCAA CTGCCAGAAG 
CTTAAGCTGC CAGAAGGCTG TGGGTATGAA TTCCAAATGC AGTATGGTTC GATTGGATGG 
TCAGTGGGTG CATTGCTCGG ATATGCTCAG GGTGCGAACC ACAAGCGTGT GATTGCCTTC 
ATTGGTGATG GGAGCTTCCA GGTTACAGCA CAGGATGTGT CAACTATGCT GCGATGTGAG 
CAGAACAGCA TAATCTTCCT GATCAACAAC GGTGGGTACA CGATTGAGGT GGAAATCCAT 
GACGGGCCAT ACAACGTCAT CAAGAACTGG AACTACACTG GCTTTGTGGA CGCCATCCAC 
AATGGCTTGG GCAAGTGCTG GACCTCCAAG GTGAAGAGCG AGGAGGAGCT GACGGCTGCC 
ATTGAGACAG CGCTAGGGGA GAAGAAGGAC TGCCTGTGCT TCATCGAGGT GATCGCGCAC 
AAGGACGACA CCAGCAAAGA GCTGCTGGAA TGGGGCTCTA GGGTTTCTGC CGCCAACTCC 
CGGCCACCAA ATCCTCAGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The B73 maize genome: complexity, diversity, and dynamics.
Science (New York, N.Y.)326(5956)1112-5(2009 Nov)
Schnable PS,Ware D,Fulton RS,Stein JC,Wei F,Pasternak S,Liang C,Zhang J,Fulton L,Graves TA,Minx P,Reily AD,Courtney L,Kruchowski SS,Tomlinson C,Strong C,Delehaunty K,Fronick C,Courtney B,Rock SM,Belter E,Du F,Kim K,Abbott RM,Cotton M,Levy A,Marchetto P,Ochoa K,Jackson SM,Gillam B,Chen W,Yan L,Higginbotham J,Cardenas M,Waligorski J,Applebaum E,Phelps L,Falcone J,Kanchi K,Thane T,Scimone A,Thane N,Henke J,Wang T,Ruppert J,Shah N,Rotter K,Hodges J,Ingenthron E,Cordes M,Kohlberg S,Sgro J,Delgado B,Mead K,Chinwalla A,Leonard S,Crouse K,Collura K,Kudrna D,Currie J,He R,Angelova A,Rajasekar S,Mueller T,Lomeli R,Scara G,Ko A,Delaney K,Wissotski M,Lopez G,Campos D,Braidotti M,Ashley E,Golser W,Kim H,Lee S,Lin J,Dujmic Z,Kim W,Talag J,Zuccolo A,Fan C,Sebastian A,Kramer M,Spiegel L,Nascimento L,Zutavern T,Miller B,Ambroise C,Muller S,Spooner W,Narechania A,Ren L,Wei S,Kumari S,Faga B,Levy MJ,McMahan L,Van Buren P,Vaughn MW,Ying K,Yeh CT,Emrich SJ,Jia Y,Kalyanaraman A,Hsia AP,Barbazuk WB,Baucom RS,Brutnell TP,Carpita NC,Chaparro C,Chia JM,Deragon JM,Estill JC,Fu Y,Jeddeloh JA,Han Y,Lee H,Li P,Lisch DR,Liu S,Liu Z,Nagel DH,McCann MC,SanMiguel P,Myers AM,Nettleton D,Nguyen J,Penning BW,Ponnala L,Schneider KL,Schwartz DC,Sharma A,Soderlund C,Springer NM,Sun Q,Wang H,Waterman M,Westerman R,Wolfgruber TK,Yang L,Yu Y,Zhang L,Zhou S,Zhu Q,Bennetzen JL,Dawe RK,Jiang J,Jiang N,Presting GG,Wessler SR,Aluru S,Martienssen RA,Clifton SW,McCombie WR,Wing RA,Wilson RK

DNA array profiling of gene expression changes during maize embryo development.
Functional & integrative genomics2(1-2)13-27(2002 May)
Lee JM,Williams ME,Tingey SV,Rafalski JA

Multiple pyruvate decarboxylase genes in maize are induced by hypoxia.
Molecular & general genetics : MGG240(2)206-12(1993 Aug)
Peschke VM,Sachs MM

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LOC541919 cDNA ORF clone, Zea mays

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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