| Gene Symbol | LOC541650 |
| Entrez Gene ID | 541650 |
| Full Name | cystathionine gamma-synthase 1 |
| Synonyms | GRMZM2G075153 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » LOC541650 cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| XM_020540229.2 | XP_020395818.1 | cystathionine gamma-synthase 1 isoform X1 |
| XM_020540229.1 | XP_020395818.1 | cystathionine gamma-synthase 1 isoform X1 |
| NM_001111405.2 | NP_001104875.2 | cystathionine gamma-synthase 1 |
Gene discovery and annotation using LCM-454 transcriptome sequencing.
Emrich SJ, Barbazuk WB, Li L, Schnable PS
Genome research17(1)69-73(2007 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC541650 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC541650 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa54755 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020540229.2 , XM_020540229.1 | |
| Accession Version | XM_020540229.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1266bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | cystathionine gamma-synthase 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020540229.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCACCG TGTCGCTCAC TCCGCAGGCG GTCTTCTCCA CCGAGTCCGG CGGCGCCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020395818.1 |
| CDS | 112..1377 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020540229.2 |
1 | ATGGCCACCG TGTCGCTCAC TCCGCAGGCG GTCTTCTCCA CCGAGTCCGG CGGCGCCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa54755 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020540229.2 , XM_020540229.1 | |
| Accession Version | XM_020540229.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1266bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | cystathionine gamma-synthase 1 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCACCG TGTCGCTCAC TCCGCAGGCG GTCTTCTCCA CCGAGTCCGG CGGCGCCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020395818.1 |
| CDS | 108..1373 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020540229.1 |
1 | ATGGCCACCG TGTCGCTCAC TCCGCAGGCG GTCTTCTCCA CCGAGTCCGG CGGCGCCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa68090 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001111405.2 | |
| Accession Version | NM_001111405.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1530bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1551542400000 | |
| Organism | Zea mays | |
| Product | cystathionine gamma-synthase 1 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BT037114.1, LPUQ01001237.1, DW804984.1 and DW981755.1. On Apr 26, 2017 this sequence version replaced NM_001111405.1. ##Evidence-Data-START## Transcript exon combination :: AF007785.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGCCACCG TGTCGCTCAC TCCGCAGGCG GTCTTCTCCA CCGAGTCCGG CGGCGCCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001104875.2 |
| CDS | 86..1615 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001111405.2 |
1 | ATGGCCACCG TGTCGCTCAC TCCGCAGGCG GTCTTCTCCA CCGAGTCCGG CGGCGCCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene discovery and annotation using LCM-454 transcriptome sequencing. |